Difference between revisions of "Os01g0624500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0624500| Description = Sgt1| Version = NM_001050155.1 GI:115438680 GeneID:4326682| Length = 4940 bp| Definition = Oryza sativa Japonica Gr...")
 
 
(10 intermediate revisions by 2 users not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
GeneName = Os01g0624500|
 
Description = Sgt1|
 
Version = NM_001050155.1 GI:115438680 GeneID:4326682|
 
Length = 4940 bp|
 
Definition = Oryza sativa Japonica Group Os01g0624500, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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The UDP-glucose:SA glucosyltransferase (OsSGT1) is a key mediator of development of chemically induced disease resistance.The OsSGT1 gene may contribute to the SA signaling mechanism by inducing up-regulation of SAG in rice plants<ref name="ref1" />. <br><br>
            clade; Ehrhartoideae; Oryzeae; Oryza.
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Systemic acquired resistance (SAR), a natural disease response in plants, can be induced chemically. Salicylic acid (SA) acts as a key endogenous signaling molecule that mediates SAR in dicotyledonous plants. The OsSGT1 can catalyzes the conversion of free SA into SA O-b-glucoside (SAG), suggesting that the OsSGT1 plays an essential role in the probenazole-induced disease defense response.
|
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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===Expression===
AP = Chromosome 1:26594542..26599481|
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Please input expression information here.
CDS = 26594595..26594766,26596770..26596839,26596927..26597051,26597274..26597412,26597661..26597757<br>,26597840..26597905,26598213..26598351,26598911..26598993,26599090..26599194<br>,26599314..26599421|
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GCID = <gbrowseImage1>
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===Subcellular Localization===
name=NC_008394:26594542..26599481
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The subcellular localization of the OsSGT1 proteins first determined by the National Key Laboratory of Plant Molecular Genetics. The OsSGT1-GFP fusion proteins localize ubiquitously in the cytoplasm and nucleus (Fig. 1).The OsSGT1-GFP fusion also ubiquitously localized in the cytoplasm and nucleus of transgenic rice root cells.
source=RiceChromosome01
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[[File:图片1.png|right|thumb|210px|'''Figure 1.''' ''Cytoplasm and nuclear localization of the OsSGT1-green fluorescent protein (GFP) fusion protein(from reference<ref name="ref2" />).'']]
preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
GSID = <gbrowseImage2>
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* National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology & Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, 200032, China;
name=NC_008394:26594542..26599481
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* Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China;
source=RiceChromosome01
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* Graduate School of Biotechnology & Plant Metabolism Research Center, Kyung Hee University, Yongini 451-701, Korea;
preset=GeneLocation
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* Agricultural & Veterinary Research Laboratories, Meiji Seika Kaisha Ltd, Yokohama 222-8567, Japan;
</gbrowseImage2>|
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* Gene Research Center, Ibaraki University, Ami, Ibaraki 300-0393, Japan;
CDNA = <cdnaseq>atggcaaccgccgccgcgtcggatctggagagcaaggccaaggcggccttcgtcgacgacgacttcgagctcgccgccgagctctacacgcaggcaatcgaggccagccccgccaccgccgagctctacgccgaccgcgcccaggcccatatcaagctaggcaactacactgaggctgtagctgatgctaacaaggccattgaacttgacccatcaatgcacaaggcttatcttcgtaaaggcgctgcatgtatacgactggaggagtatcaaactgcaaaagcagctcttgaattgggttactcgttcgcatctggtgactcaaggtttactcgcctaatgaaggagtgtgatgagcgcattgctgaggagcttagtgaagtccctgttaagaaggctgaagatggagcagctgccccctctgttgcttcttttgttgaggaaaaggatgatgctgcaaacatggataatacaccaccaatggtagaagtgaagccaaaatacaggcacgacttctacaacagtgctacagaagttgtattgacaatttttgcaaagggtgttcctgctgagaatgttgttgttgattttggtgaacaaatgttaagtgtgtcgattgaagtccctggagaggagccgtaccattttcagcctcgtctgttttctaagatcatccctgagaaaagcagataccaagtgctatccacgaaggttgaaataagactggctaaagctgaacagattacatggacctcacttgattatgataaaaaaccaaaggctgttccacaaaagataatccctccagctgaatcggcccagaggccatcatatccttcctcaaaatccaagaaagactgggataaactggaagctgaagttaaaaaggaggagaaggaggagaagcttgaaggcgatgctgcattgaacaaatttttccgtgacatctacagtgatgctgatgaagacatgcgacgagcaatgatgaaatcttttgttgaatctaacggtactgttctgtcgaccaattggaaagatgttggctcgaagaaggtagagggaagcccacctgatgggatggagcttaagaaatgggagtactaa</cdnaseq>|
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* Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, Sendai 980-8579, Japan.
AA = <aaseq>MATAAASDLESKAKAAFVDDDFELAAELYTQAIEASPATAELYA                    DRAQAHIKLGNYTEAVADANKAIELDPSMHKAYLRKGAACIRLEEYQTAKAALELGYS                    FASGDSRFTRLMKECDERIAEELSEVPVKKAEDGAAAPSVASFVEEKDDAANMDNTPP                    MVEVKPKYRHDFYNSATEVVLTIFAKGVPAENVVVDFGEQMLSVSIEVPGEEPYHFQP                    RLFSKIIPEKSRYQVLSTKVEIRLAKAEQITWTSLDYDKKPKAVPQKIIPPAESAQRP                    SYPSSKSKKDWDKLEAEVKKEEKEEKLEGDAALNKFFRDIYSDADEDMRRAMMKSFVE                    SNGTVLSTNWKDVGSKKVEGSPPDGMELKKWEY</aaseq>|
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DNA = <dnaseqindica>54..225#2229..2298#2386..2510#2733..2871#3120..3216#3299..3364#3672..3810#4370..4452#4549..4653#4773..4880#cccccacccgcatcccccggcctcctcaccgcagccgcaaaagccaagccgccatggcaaccgccgccgcgtcggatctggagagcaaggccaaggcggccttcgtcgacgacgacttcgagctcgccgccgagctctacacgcaggcaatcgaggccagccccgccaccgccgagctctacgccgaccgcgcccaggcccatatcaagctaggcaactacactggtaatccatctctcgcaatctcccccttcctccccttccttcgattagattggtttgccgtgtgtgcggtggtggtggtggtggtctggggagtctgtgtggatgtagatgagatcgtgaggcgtggggtgtgtggttttgtgcgtttttgattcgtggtttgttgcgcctatttgcgggagttacgtcaaaccggtgtttgttttgcgtgttcaagcaattcgtgtgcgtgtgtgtgatcgcgcttcgtgatttggagaaggatctagggtgaaggtcatgggatgggccaaaataagttttattagtgacagttgacttgctgataggaggagatattgagcgcaaggagggcatagctgcattgtggcaggtaccatcctagtcgaaagaagcagcatagttgtttgtgggggatatgaggacgccacaaataccatgtttcgaattcgaaccattccgttcgcgtgccgtactgtgtgatttggatttggtctaggtcgggggttattggactggggaaatctgttcgataggtgagagttgacttgctatactccattttctaaacacttgacacttctgaccagaatcctaggcacaattcagagggcttttaaatgatttacgtcaagcatgaatgatgatggtgcgcagtagtgaattggtagggggtaaattgagtttggaagcgtgagagatatttggagtagttaaaaatcaaaggatgagaaagtattgttcaactgttaaagtatacttgattgaacccactaaccattttgtatggaagtcagacttcattaagtgaaccatacttagttgcttgtttatttctagttattgtactccctctggtttcattttaattgatgttttggacaatgacacggtctacaagatatatatttgatcttatttttctattataatatatataataaataaatgcatgtttacttttattatagtgctttaaaagacaaatctatatatgttgttctagttcctttaaactaaatatttttaaagttattgatggtcaaagttataaaagtttgacatcaatcttgttcaaaatgtcaattaatatagaaccggagggagtatatgacaaagctggtgtgcgctgtagaaaaaattgacaactaatgatccaagatgatgcatgttaatgattgtttaaaatttcccttgttctatatatccaaatttcatctgcaccgcatatcatgcctaatgattgcatatagcaaacaaaaacagatatttaaaatttgatgaaacaatcaaatttaactccttagtgtgctgatcttgcctgttccttttgatttacaaagtaagataaaacaagaaatttataaagatatgtgtgcttgactgtttagctagctatgtaggagagtaggtctactcttattttagagcaatagttagccgtggcagattttgatgggtctacctgttgttattgttcagctattacttactgagaattcccagctaaatttgccaactcaaggaaatgctatactcctgcatgtttgctgattactgttttctgtctgttatcatagtattgaattagtataagagtgctggtgctaaaatgatatctggcgacaacttgctgcttgccagcagaaaaccccttggttctgatctttgtaaaaaaaagtcaggttggactagtgtttgatcattccccttggttctgatctttgtaaaaatttgtcaggttgcacatatctttgacaattctgtccgaaatgttgcaaaattttattgccaaacaaggcattaatcatccttatcagtaatagctgtaagttgttttgtagcctgtagccctaaattatcagcactgctatatcttaaaatacctcagtataagggtgctggtgctaaaatgacttagctgcatgtttattttgttttgtttgcaaagacattatcatgctgtttcatattaaagcaacaaattgcactttgtcttgcagaggctgtagctgatgctaacaaggccattgaacttgacccatcaatgcacaaggcttatcttcgtaaagggtcagtcttgactaaattatttaatgttatgaaaaaagactaggcacattaatttattatgatggctgataagcaaatgatctttagcgctgcatgtatacgactggaggagtatcaaactgcaaaagcagctcttgaattgggttactcgttcgcatctggtgactcaaggtttactcgcctaatgaaggagtgtgatgagcgcattgctggtaagctgtccctttgagtccattgcttggttaatacatttgcagtattgtgttatatttttacctggggcataccattacgtgagactaccatattatagtatgcattttcacacatatttgtcctctgggatgaatatccacagcagtcctgtaagttgaagtgaaatgtatgcacgagacatctttctcatactttgatgctgtgcattttcttttcagaggagcttagtgaagtccctgttaagaaggctgaagatggagcagctgccccctctgttgcttcttttgttgaggaaaaggatgatgctgcaaacatggataatacaccaccaatggtagaagtgaagccaaaatacaggtaaccagttcatgaatcctttaacactgtgcttcttttcccaatacagttctttagtcaagtatcaagttattctgaattgaggggtccactttatattttggaaaccacttgacagaatccacatgaatatatgggataatgtcccacaccctttctcagacactaaaccaagtgcttcttagggctggattttaaccccaatgatttggtactgacattttctggaaatgcacctggtgttgcaggcacgacttctacaacagtgctacagaagttgtattgacaatttttgcaaagggtgttcctgctgagaatgttgttgttgattttggtgaacaaatggtgtgtaccttaacaataaattgttgcaaatcatctatatttactaatttactgtgctcactaattaagccttccattttagttaagtgtgtcgattgaagtccctggagaggagccgtaccattttcagcctcgtctgttttctaaggtatgcaatccctgcaataccaggattatttctcttcttaatgcattggaaatggaaacagtgcatattgttatgacctgaatatgtttgtgcatttcctctaatttgtaaggtatttacctgaaatatgcttccaaacctaataaagctgggtgtactgctttgcctattttctttggttgcattgctgttgatccatacatacagttctttttgaaaaccaatactcagcatctgtttattatgatttctatgcacagtaccaatcatctcacctcttaacttttgctaatctcttgactatcagatcatccctgagaaaagcagataccaagtgctatccacgaaggttgaaataagactggctaaagctgaacagattacatggacctcacttgattatgataaaaaaccaaaggctgttccacaaaagataatccctccaggtaacaaactaagcaaaactattgcagttgatttccagaaaactgttgaacctactattgtgttgcttcttgtggttagttgaaagttgcactgttcaatcttattataagaggttccccttaaatatctgtactttgctgggtataattatttactgctttatgttagtaactggtgagctgatttatagccatggaaagaaatgacttcttttccattcatgtggtagttatcaataaggtctgccgttctatgcacttgctgatcgctggctcacatgtcaggctagtcatttccattttgctggttcctgtgcttgttgaacacattaatgtcacaaaaaattggtaatcgaatttaaatgaaaatggaagagggttctgagtgttatcttgctaataccttgttgaggctgatggtttactgccagatcggcttaagcatgaactgtacatgactggaatacaaccaagatcaagtctggcttttttttggggttcaattgttattctttccccatctctcctacagttttactgatagcccttcttttatcagctgaatcggcccagaggccatcatatccttcctcaaaatccaagaaagactgggataaactggaagctgaagttaaaaaggaggttagtatgatgcacatggttcaacgtttcactgcctgtggacattccttgaactctggtaattattgaattgccatgactttgaatttccaacaggagaaggaggagaagcttgaaggcgatgctgcattgaacaaatttttccgtgacatctacagtgatgctgatgaagacatgcgacgagcaatgatgaaatcttttgtatgtctttctttagcacaattgatgaaatgtttataactagtgaccttgctgacagaagtgcgtttagtaagtttgaactttgtatacttatacatcaacgatgtgcttgtttgcaggttgaatctaacggtactgttctgtcgaccaattggaaagatgttggctcgaagaaggtagagggaagcccacctgatgggatggagcttaagaaatgggagtactaagatctcggttcgtgcatgctgtaaattcgttatcgtcgtgagtcatcacttggctggaga</dnaseqindica>|
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==References==
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050155.1 RefSeq:Os01g0624500]|
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<references>
}}
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* <ref name="ref1">
[[Category:Genes]]
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Kenji Umemura1, Junji Satou2, Michiaki Iwata1, et al. Contribution of salicylic acid glucosyltransferase, OsSGT1, to chemically induced disease resistance in rice plants[J]. The Plant Journal (2009) 57, 463–472.
[[Category:Japonica mRNA]]
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</ref>
[[Category:Oryza Sativa Japonica Group]]
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* <ref name="ref2">
[[Category:Japonica Genes]]
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Yaling W, Mingjun G, Qun L, et al. OsRAR1 and OsSGT1 Physically Interact and Function in Rice Basal Disease Resistance[J]. Molecular Plant-Microbe Interactions (2008) 21(3): 294-303.
[[Category:Japonica Chromosome 1]]
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</ref>
[[Category:Chromosome 1]]
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</references>
 +
 
 +
==Structured Information==
 +
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]

Latest revision as of 04:49, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

The UDP-glucose:SA glucosyltransferase (OsSGT1) is a key mediator of development of chemically induced disease resistance.The OsSGT1 gene may contribute to the SA signaling mechanism by inducing up-regulation of SAG in rice plants[1].

Systemic acquired resistance (SAR), a natural disease response in plants, can be induced chemically. Salicylic acid (SA) acts as a key endogenous signaling molecule that mediates SAR in dicotyledonous plants. The OsSGT1 can catalyzes the conversion of free SA into SA O-b-glucoside (SAG), suggesting that the OsSGT1 plays an essential role in the probenazole-induced disease defense response.

Expression

Please input expression information here.

Subcellular Localization

The subcellular localization of the OsSGT1 proteins first determined by the National Key Laboratory of Plant Molecular Genetics. The OsSGT1-GFP fusion proteins localize ubiquitously in the cytoplasm and nucleus (Fig. 1).The OsSGT1-GFP fusion also ubiquitously localized in the cytoplasm and nucleus of transgenic rice root cells.

Figure 1. Cytoplasm and nuclear localization of the OsSGT1-green fluorescent protein (GFP) fusion protein(from reference[2]).

Labs working on this gene

  • National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology & Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, 200032, China;
  • Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China;
  • Graduate School of Biotechnology & Plant Metabolism Research Center, Kyung Hee University, Yongini 451-701, Korea;
  • Agricultural & Veterinary Research Laboratories, Meiji Seika Kaisha Ltd, Yokohama 222-8567, Japan;
  • Gene Research Center, Ibaraki University, Ami, Ibaraki 300-0393, Japan;
  • Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, Sendai 980-8579, Japan.

References

  1. Kenji Umemura1, Junji Satou2, Michiaki Iwata1, et al. Contribution of salicylic acid glucosyltransferase, OsSGT1, to chemically induced disease resistance in rice plants[J]. The Plant Journal (2009) 57, 463–472.
  2. Yaling W, Mingjun G, Qun L, et al. OsRAR1 and OsSGT1 Physically Interact and Function in Rice Basal Disease Resistance[J]. Molecular Plant-Microbe Interactions (2008) 21(3): 294-303.

Structured Information