Difference between revisions of "Os01g0842600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0842600| Description = Similar to AAA-metalloprotease FtsH| Version = NM_001051309.1 GI:115440988 GeneID:4327502| Length = 5416 bp| Defini...")
 
 
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{{JaponicaGene|
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This gene encodes FtsH protease 3 (OsFtsH3), homologue of AtFtsH3/10.
GeneName = Os01g0842600|
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==Annotated Information==
Description = Similar to AAA-metalloprotease FtsH|
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===Function===
Version = NM_001051309.1 GI:115440988 GeneID:4327502|
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Please input function information here.
Length = 5416 bp|
 
Definition = Oryza sativa Japonica Group Os01g0842600, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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===Expression===
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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Please input expression information here.
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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===Evolution===
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Please input evolution information here.
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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AP = Chromosome 1:37938310..37943725|
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You can also add sub-section(s) at will.
CDS = 37938596..37939060,37939135..37939362,37939901..37940668,37940838..37941320,37942471..37942598<br>,37943127..37943195,37943276..37943480,37943593..37943655|
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GCID = <gbrowseImage1>
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==Labs working on this gene==
name=NC_008394:37938310..37943725
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Please input related labs here.
source=RiceChromosome01
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preset=GeneLocation
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==References==
</gbrowseImage1>|
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Please input cited references here.
GSID = <gbrowseImage2>
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name=NC_008394:37938310..37943725
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==Structured Information==
source=RiceChromosome01
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgagcctctcctccctctcccgcgccctcgcccggtccgcgcgctcctcccggcagcgccagggttctctgctcggggggcatggcgggctccgtgcttcgtcgccgccgctgccctgcggcgagttgggttttctgcgcagctatgtgacgtcagttatcgggaatcgggcagcggtggcctccggggcagggaagggtggggactggaggttcctgcttgctagccggcagttccggcggctattctccgacaagtcgaagaaaaaccacgggaagcattcggaggaggagaataaaggtaaaggggatgagagtgacaagtccgactcaaagaagcaatccagttcaggtgatcaatggaatttcgaggagagcattaaacaattcaaggacatgattgctcctttattcctttttggcctattattgttatctgcatcagcatcttcatcagagcaggagataagcttccaagaattcaagaataagttgttggaacctggtttagttgaccacattgttgtttcaaacaagtcaattgctaaggtttacgtcaggagttcaccttcaattgatcgaattcaggatagtgatatccatataactacaagtcatcttcctgggatagagtctcctagcagctacaagtattacttcaatattggaagtgttgactcctttgaagagaagttacaagaggcccagaaagcattggagatagatccacactattatgtcccaatcacttacactactgaagcaaaatggtttgaggaagtaatgaagtatgtcccaaccgttctaattattggattaatatatttgcttgggaaaaggatacaaaatggatttactgttgggggtggtcctgggaaaggaggccgtagcattttcagtattggaaaagttcaagtgacaaaattggataaaaactccaaaaataaggtgttctttaaggatgtagctggctgtgatgaagccaaacaagaaattatggaatttgttcatttcctgaaaaatcccaagaaatatgaagaactgggagcaaaaataccaaagggtgctcttcttgttggtcccccaggcacaggaaagactctccttgctaaagctactgcaggagagtctggtgtgcccttcttgtctatttctggttcagacttcatggaaatgtttgttggtgttggaccatccagggtgcggaacttatttcaagaagctcggcagtgttcacctagtattgtattcattgatgaaattgatgcaatcggccgtgctagaggccgtggaggtttttctggtggacatgatgagcgtgaaagcacattgaaccagttacttgtagagatggatgggtttggaactacatctggtgttgttgttcttgctggtaccaataggcctgacatcctggataaggctttgctaagaccaggaagatttgatcgtcagataagtattgataaaccagacataaagggtcgtgatcaaatatttcgcatctaccttaaaaagctgaaactggacaaggaaccatcattttattcacaaagattagctgctttgacacctggatttgctggagctgacattgccaatgtttgtaatgaggcagctttaattgctgcaagaagtgagggcacactcattacaatgcaacattttgaatctgcaattgatagggttatcggaggcttggaaaagaaaaacaaggtgattagcaagttggagcggcgaactgttgcttaccatgaatctggtcatgctgttgctggatggtttttggagcatgccgagccactactgaaggtcacaattgttcctcgtggaacagctgctttaggttttgctcagtatgtgccaaatgacaatcttttgatgactaaagagcagctttttgacatgacctgcatgacactaggtggccgagctgctgaggaggtcttgattggaaagatctcgactggtgcacagaatgatctggagaaagttactaagatgacttatgcccaggttgcagtatatggcttcagcgaaaaggttggccttctttctttccctcaaagggaggatggttttgagatgagcaaaccatatagcagccagacggcatccatcattgacactgaggtgagggaatgggtcgctaaggcctatgaaaaaactgttgagcttataaaacaacataaagatcaagttgcacaaatcgccgagctgctgcttgagaaagaggttctccaccaggatgatcttgtccaggttctaggggaacgcccattcaagacactcgagccaactaattatgatcgattcaaacaaggttttcaagatgaagacagcaataggaatgctgaattgtcaaatgcagatggagcatcatcccttggagaggctgtggcatcataa</cdnaseq>|
 
AA = <aaseq>MSLSSLSRALARSARSSRQRQGSLLGGHGGLRASSPPLPCGELG                    FLRSYVTSVIGNRAAVASGAGKGGDWRFLLASRQFRRLFSDKSKKNHGKHSEEENKGK                    GDESDKSDSKKQSSSGDQWNFEESIKQFKDMIAPLFLFGLLLLSASASSSEQEISFQE                    FKNKLLEPGLVDHIVVSNKSIAKVYVRSSPSIDRIQDSDIHITTSHLPGIESPSSYKY                    YFNIGSVDSFEEKLQEAQKALEIDPHYYVPITYTTEAKWFEEVMKYVPTVLIIGLIYL                    LGKRIQNGFTVGGGPGKGGRSIFSIGKVQVTKLDKNSKNKVFFKDVAGCDEAKQEIME                    FVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEM                    FVGVGPSRVRNLFQEARQCSPSIVFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVE                    MDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLK                    LDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEGTLITMQHFESAIDRVIGG                    LEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPND                    NLLMTKEQLFDMTCMTLGGRAAEEVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSEKV                    GLLSFPQREDGFEMSKPYSSQTASIIDTEVREWVAKAYEKTVELIKQHKDQVAQIAEL                    LLEKEVLHQDDLVQVLGERPFKTLEPTNYDRFKQGFQDEDSNRNAELSNADGASSLGE                    AVAS</aaseq>|
 
DNA = <dnaseqindica>4666..5130#4364..4591#3058..3825#2406..2888#1128..1255#531..599#246..450#71..133#gggatcaaaaccctaatacggcccgcccccgcctcgatctccgtccaatgcgctcgccgccgccgccgccatgagcctctcctccctctcccgcgccctcgcccggtccgcgcgctcctcccggcagcgccaggtgagtgcccgagccgcaccccctccccttcccctctccgattggtgtggcttcttcctgcgcgtcctcgccctaatggctcgggcggcgtgtgcggatgtcgttgccgtagggttctctgctcggggggcatggcgggctccgtgcttcgtcgccgccgctgccctgcggcgagttgggttttctgcgcagctatgtgacgtcagttatcgggaatcgggcagcggtggcctccggggcagggaagggtggggactggaggttcctgcttgctagccggcagttccggcggctattctccgacaagtcgaagaaaagtaagctttctggctggttaggtggtttttggggatatctggtgactctgttaatatttaacgttgccttttttattcagaccacgggaagcattcggaggaggagaataaaggtaaaggggatgagagtgacaagtccgactcaaagagtaagtgcttattttaacctgcattcctcgctcttgtgttggatatggtttattaaggtgttgagctttgcaaaatattttgaaagagagtagacttttacataccagtggcgacttaaccttccgagtgctgccctaaaatcatgctatatcataacttgtgatttctagttttagtatactgataatagaaaacaatgttaagaagatgatatgcagagcttttgtaagtggcaatacatgttaaacagagtggggctagttgatgttttattttattgcacaaatacccctaacagtatgtaagtatcatgtatagctgaaaatgctaatatttgagttttagtgcctcataaactgcccgctcacctttaagggagaggtactagcatgagtattgtggaatacgacaacatgagcctttagcccaaagcaagttggttgcgtacaatttgtaaagtttgatgcatccgtatatagcattatactgcaaaccacatacttaatgtggtcatttctggtgtgcagagcaatccagttcaggtgatcaatggaatttcgaggagagcattaaacaattcaaggacatgattgctcctttattcctttttggcctattattgttatctgcatcagcatcttcatcagagcaggaggtctgttcctactgaaaaaccgactgttaaacatgagcaacagtagtggcttgtgtgtttcattgtcattttacctgttcacacttgtggatagaagatagctgttatcaaaatccccatttactttactgaaggtcctcgcctttggtcagccttataaatttcagaaaagaatcattccaattctgtgtggtatataaattttgtcagtgttcattttgctgcagtccaattagagaggtgatatgaggttatatataaggttactttttttatcttgaaaaaaatatttggtggtttcgctggcctagcaaagtggtaaggaaaaaaaaattatgctttcacatgtagtccttagtttatgttttatttgtacataacacaattgatgataattaattagctgcccccctccattcctaaataattttcactatactattcatatcctaagtttgacttctcatattttatcaagaaacttgtaaatatttaaaagtatactccctccatccctagatgtaagggattctagctatgaatctggacacgtgcatgtccagatccatatatttatagccagaattccttaaatttagagacagagggagtactatattatgaaattatattacatgctaaatatgatcatactgttttcattcatcaaaacatgatatatatatatatttttaaaaaagttgtggtcaaagttgtaacagcaccggttaatggtgacaagcaaatgtaaacagagggagtatgactgaagttatggttgactgaaaagatttaaatcacatagttgtactgatggagatggtatgcttttgctcgagagcattaatgtgattatttggtgcagcatgtgaccctagctacagtacttcattactgatggcatatcatatcctatcctaagagtttgatatagggcattttagcatgagcttcgtatgttgttagtgccatgttggtatgaaatgcaatatggttggtattctacatcctattaatcatctaatcctgtataactatatcatatatccacacttcagttccctaccagtttctttttctgtgcgacacatacattcatttcctagtccattataacttgtgatacccacttaattgtaattcttttcagataagcttccaagaattcaagaataagttgttggaacctggtttagttgaccacattgttgtttcaaacaagtcaattgctaaggtttacgtcaggagttcaccttcaattgatcgaattcaggatagtgatatccatataactacaagtcatcttcctgggatagagtctcctagcagctacaagtattacttcaatattggaagtgttgactcctttgaagagaagttacaagaggcccagaaagcattggagatagatccacactattatgtcccaatcacttacactactgaagcaaaatggtttgaggaagtaatgaagtatgtcccaaccgttctaattattggattaatatatttgcttgggaaaaggatacaaaatggatttactgttgggggtggtcctgggaaaggaggccgtagcattttcagtattggaaaagttcaagtgacaaaattggataaaaactccaaaaataaggttagtttttatttgctatttccatctcttgctattttgaacaaaacatgaaattcatatccttttttgtaaatgtttgttctgtagctttattcaccattgacaaagaacatacaataacatattcatataattctactgaagtaaccttgtttcttgtgtgctacaggtgttctttaaggatgtagctggctgtgatgaagccaaacaagaaattatggaatttgttcatttcctgaaaaatcccaagaaatatgaagaactgggagcaaaaataccaaagggtgctcttcttgttggtcccccaggcacaggaaagactctccttgctaaagctactgcaggagagtctggtgtgcccttcttgtctatttctggttcagacttcatggaaatgtttgttggtgttggaccatccagggtgcggaacttatttcaagaagctcggcagtgttcacctagtattgtattcattgatgaaattgatgcaatcggccgtgctagaggccgtggaggtttttctggtggacatgatgagcgtgaaagcacattgaaccagttacttgtagagatggatgggtttggaactacatctggtgttgttgttcttgctggtaccaataggcctgacatcctggataaggctttgctaagaccaggaagatttgatcgtcagataagtattgataaaccagacataaagggtcgtgatcaaatatttcgcatctaccttaaaaagctgaaactggacaaggaaccatcattttattcacaaagattagctgctttgacacctggatttgctggagctgacattgccaatgtttgtaatgaggcagctttaattgctgcaagaagtgagggcacactcattacaatgcaacattttgaatctgcaattgatagggttatcggaggcttggaaaagaaaaacaaggtattttttacggtgccaattttcatttgcctctactagttgatttatcaaattttacataagaattttgcaacctggctgccaaactatccagtatccacaatgctgctaggctacgagtacataaataaacaaaattgttgcaaatactttgttgttgggctgccatactttttgttttatcaattcaggaggtagcaaattttattatatatatgttaaacaatatcggcttggtcaatgttgtcaattctatatgagaactgcttataactgttttttcttaaattgcaaataattgctatattttattcttgatgtgactgaggcgcactttgaaaccttcacatttgctttgagagcctaggttggtttgtacaattttaaaagtgatttcagtgttctctttgttacttgttacagcagaaatcattgcataattaagtgctgttgcattggatgtaaagtattatatggggcatgaacaattggacattcatgtgtagcggttatgtacttatcaatctgtccaccacaggtgattagcaagttggagcggcgaactgttgcttaccatgaatctggtcatgctgttgctggatggtttttggagcatgccgagccactactgaaggtcacaattgttcctcgtggaacagctgctttaggttttgctcagtatgtgccaaatgacaatcttttgatgactaaagagcagctttttgacatgacctgcatgacactaggtggccgagctgctgaggaggtacacaacattttctaacttatcagtagagtttattcttaagcaaatgacttaattatgtgattttttttcaggtcttgattggaaagatctcgactggtgcacagaatgatctggagaaagttactaagatgacttatgcccaggttgcagtatatggcttcagcgaaaaggttggccttctttctttccctcaaagggaggatggttttgagatgagcaaaccatatagcagccagacggcatccatcattgacactgaggtgagggaatgggtcgctaaggcctatgaaaaaactgttgagcttataaaacaacataaagatcaagttgcacaaatcgccgagctgctgcttgagaaagaggttctccaccaggatgatcttgtccaggttctaggggaacgcccattcaagacactcgagccaactaattatgatcgattcaaacaaggttttcaagatgaagacagcaataggaatgctgaattgtcaaatgcagatggagcatcatcccttggagaggctgtggcatcataacttggacagaattgtaggtgtatatcgcatgtttgctgaacagattattaatatttctgaggcatgagaagctgtataaaggtgttcatatgccaagttatggctattttgctagattgcgatttccacttcgcgcaggcgttcaatctgttgaatctgccgataactagtggttcagttcatgaattttcagaaatttacttgacgatttgatctctgttcctgtaaggctgtaacctagcactagggcatgagaagttgtataaaggtgttcgtggtttttctg</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051309.1 RefSeq:Os01g0842600]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 05:01, 14 May 2015

This gene encodes FtsH protease 3 (OsFtsH3), homologue of AtFtsH3/10.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information