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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0872700|
| |
| − | Description = Putative 5-3 exonuclease domain containing protein|
| |
| − | Version = NM_001051482.1 GI:115441334 GeneID:4324952|
| |
| − | Length = 7797 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0872700, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:39600841..39608637|
| |
| − | CDS = 39601233..39601899,39601981..39602087,39602176..39602251,39602335..39602439,39602639..39602796<br>,39602899..39602973,39603054..39603094,39603182..39603258,39603343..39603471<br>,39603578..39603648,39603825..39603920,39604077..39604172,39604269..39604541<br>,39605459..39605545,39605689..39605766,39605938..39606102,39606210..39606356<br>,39606509..39606571,39606670..39606789,39606940..39607131,39607260..39607336<br>,39607682..39607784,39608272..39608475|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008394:39600841..39608637
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008394:39600841..39608637
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgggtgtgccggcgttctaccggtggctggcggagaagtacccgatggtggtggtggacgtggtggaggaggaggcggtggagatcgagggcgtcaaggtgcccgtcgacacctccaagcccaaccccaacggcctcgagttcgacaacctctacctcgacatgaacgggatcattcacccctgcttccaccccgaggataggccctctccgacaacattcgctgaggttttccagtgcatgtttgattatatcgataggctatttgtcatggttcgccctcggaagcttatgtatatggccattgatggtgttgctcctcgtgccaagatgaaccagcaacgctctagacgattcagagctgcaaaagatgctgctgatgcggccgcagaagaagagaggttgcgtgaagagtttgagagggaaggcagaaaacttccaccaaaacagcaatctcaaacatgtgattctaacgttattactccaggaacagagtttatggctgttttatcgattgctttgcagtactacatccatctcaggttgaattatgatcctggatggaaacaagttaaagttattctttctgatgccaatgttcctggtgaaggggaacataaaattatgtcctacattcgcggtcaacggaatctccctggatttaacccaaatactcgccattgtttgtatggcctggatgcagacctgatcatgttagctcttgcaacacacgaagtacatttctctatactgagagaggtagtttatacacctggacagcaggacaaatgcttcttgtgtggtcaggttggacatctagcagcaaactgtgaaggaaaggttaagagaaaagctggggagtttgatgaaaaaggtgaagctattgttccaaagaaaccttaccagttcttgaatatatggaccctccgggagtacttagaatatgagttcagaatgcagaatccacctttcccgattgactttgaacgcatcgttgatgatttcatcttcatgtgtttttttgttggcaatgattttcttccacatatgccaacattagagattcgtgagggagctattaacttgctaatggctgtatacaagaaggaatttccttccatgggtggctatctaactgatgcttgcacgccggatctgaataaagttgaacactttattcaagcagttggctcctacgaggataaaatatttcagaaaagagctcgtttgcatcagcgtcaagctgaaaggataaaacgagaaaaggcccaagcaaaacgaggggatgacctggatccccatgtcagggatgatcttattgtacctgttgcacgcttccaagggtctcgccttgcatctggacctgtgccttcaccatatgaacaaaatggatctgacaaaaacaatgggggaaaaaatagtcgtgctcggaaagctgcacgggtatcatcgtcaggttcaagcattgcggctgctattgttgaagctgaaaatgaccttgaagcacaggaacgcgaaaacaaggaagatttgaagacaatgcttaaagatgcacttcgtgagaaatctgatgtttttaattctgaaaatccagaggaggacaagataaaacttggagaaccaggatggagggaaaggtactatgaagagaagtttggagcaagaacacccgggcagattgaagaaatacgcagagatgtcgttctgaaatatactgaaggtttgtgttgggtaatgcactactattatgaaggtgtctgctcgtggcaatggttttacccttaccattatgctccttttgcttcggatttgagtggtctaggtcaactcaatataacttttgaacttgggtcaccattcaaaccgtttgatcaacttatgggagttttcccagctgctagctcccatgcactccctgtacagtatcggcaattgatgacagatgcaaattcaccaataattgatttttatccaactgattttgaagtagatatgaatgggaagaggtattcatggcaggggatagcaaaactgcccttcattgatgaagcccggttgctagctgaaattaaaaaagttgagcatactttgacgcctgaagaagcaaggagaaacagtatcatgttcaatatgctttttgtgaatggctcccatccactttcgccttatatctactccctcaacagcaaatttggacacctacctgacagagagcgaaatgaaattaaagaaaagattgatccttcttctagtggaggaatgaatggttacatctcactttgtagtggggatccgtgccctcctgtcttcaggtctcctgttgatgggttggaggatatcatggacaatcaagtgatatgtacaatctacaagcttccggattctcataagcacatcgctcgtccacctgttggtgtaatcatacccaagaagactgttgaagctactgacctgaaaccaccacctgtgctatggcatgaagacagtggtaggaggcctcatgataataacaacaggaggccttatgaaaacagcaacaggcaaaacccagctggagcaatatctggccgccaacttggggaagctgcccaccgacttgtggtgaacagcttgaatgctcggagtggcggacaatacaataccccatcgatgccatatcaaaccataatgaatggcatgccttatccaaatgggattccaccaaggatggagcagcctgctcctggctggcatgttcctggtgatctaccaaatggtcaggtaccaccagcttatgcatcatcatcaggtcattatcagaacgataggtctgggccttctcagtatggacgagataaccatggaaggtacccatatgcaagagacaaccaccatgattcaagaggaagggttccaccataccatcagagcggtggaaactcgtatcaatcacattctgctccatcagcaggtcctggacggtatgcgcaacccccaccatatgctggggggtatggtaggagctaccagcctgcaccgtatggaggtggtcagcagtggcagcagcagcagcaacaaccttatggctcctatgctgggtcagggccttatgggggtggggcacctcctgcaaggcctaattcacgaccacagcagtcgcagaaccgttacaataccttagataggaattctaacaggagacctccaccaggtcatgggcgacactaa</cdnaseq>|
| |
| − | AA = <aaseq>MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPN GLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAI DGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVI TPGTEFMAVLSIALQYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNL PGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAAN CEGKVKRKAGEFDEKGEAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDD FIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPDLNKVEHF IQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSR LASGPVPSPYEQNGSDKNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENK EDLKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRD VVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFD QLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFID EARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERN EIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKH IARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRRPHDNNNRRPYENSNRQNPAGAISG RQLGEAAHRLVVNSLNARSGGQYNTPSMPYQTIMNGMPYPNGIPPRMEQPAPGWHVPG DLPNGQVPPAYASSSGHYQNDRSGPSQYGRDNHGRYPYARDNHHDSRGRVPPYHQSGG NSYQSHSAPSAGPGRYAQPPPYAGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPY GGGAPPARPNSRPQQSQNRYNTLDRNSNRRPPPGHGRH</aaseq>|
| |
| − | DNA = <dnaseqindica>6739..7405#6551..6657#6387..6462#6199..6303#5842..5999#5665..5739#5544..5584#5380..5456#5167..5295#4990..5060#4718..4813#4466..4561#4097..4369#3093..3179#2872..2949#2536..2700#2282..2428#2067..2129#1849..1968#1507..1698#1302..1378#854..956#163..366#cctcccctccccgcccgcgtggcctacccccttcgttagggtttcgcgccctcttccctctctcccttcccctcggccgtcggcccggctcctcgcggcggcggcggcggcggctcgctttctagggttagggttagggttccggcggcggaggaggaggagatgggtgtgccggcgttctaccggtggctggcggagaagtacccgatggtggtggtggacgtggtggaggaggaggcggtggagatcgagggcgtcaaggtgcccgtcgacacctccaagcccaaccccaacggcctcgagttcgacaacctctacctcgacatgaacgggatcattcacccctgcttccaccccgaggatagggtacgtcgatgttttttttttgggcgtttctgtttgcgtagctctggggtttgtttgggtgttcgtatggtgtccctccgctgtacaggtgatggatttgtgtatgcctgattgatgtacgacggagctgtggcagaggagatagtttggtgaaatgattttgtagcttcctgttttgtaatttacctgagcgttaaacataattttgcaaataaccacaaactgctaaattgccacatgagccatcttaggatgaggatgctgctgtagtttaatcttcaaactctgcatcgcaaatttgttaatttgcctttttgagttatgtttattttcattcggtggacgcaccagtttagactgcatgatgctactctgtcattgccctgcatttctcttcgaacaaatattttaatgtttactgattgctcaagtgctttctgatttctctgctgaccatgatttcttgctattgtgttatcttttacagccctctccgacaacattcgctgaggttttccagtgcatgtttgattatatcgataggctatttgtcatggttcgccctcggaagcttatgtatatggccattggtacgtataacatctgatgtgtaggaattctcttactacctttttccttcctaaaggattaggagtgtttagtgtcattgctcttttacctgttggtcatcatcatagaacagcttgccatactgccaactaatgcctttgttgaagttagctatatactatgacgagtcatttacatgagttttgaatcaggcataatcctcacccgtaaactatttatttggcagcatagtacctgtgcttgtaaacttttgctgtccagggtcctgttttttaccacatatgttttgttcttgtcgatggtttcttgttgatattttgtattatcttacaatggttttacagatggtgttgctcctcgtgccaagatgaaccagcaacgctctagacgattcagagctgcaaaagatgctgctgatgcggtcagtattctagtgaaattatcttcctttatgcagtgtatgataatatgtcgacatttaaattcccattcatcgacggcttcaaggggtagaattgcatttatggcttattatttttctatctccaggccgcagaagaagagaggttgcgtgaagagtttgagagggaaggcagaaaacttccaccaaaacagcaatctcaaacatgtgattctaacgttattactccaggaacagagtttatggctgttttatcgattgctttgcagtactacatccatctcaggttgaattatgatcctggatggaaacaagttaaagtaagcatggttttaagcctatcagttttgttttggcattacattctgtcagtatgttccatatgttaacttcacaaactctaaggtttacattgattggaaaggcaagtatgaaaaagtcatgtgtgttctggttaaattcttttgaaggttattctttctgatgccaatgttcctggtgaaggggaacataaaattatgtcctacattcgcggtcaacggaatctccctggatttaacccaaatactcgccattgtttgtatggcctggtatgttctataaacctattttttatatattttaattgggcaatgtttcttctgttggtcctgctaatgcatttttttatatatactcttgaatgcaggatgcagacctgatcatgttagctcttgcaacacacgaagtacatttctctatactgagagaggttagctctcctcaggacctagaatcaatgcctttttgtgtaaatacattttaccatgttatgctaactaaaagagcggattagttccttatgctttcttgtttatgttatttgttttctctctcttctgactatattttggtttcttgcaggtagtttatacacctggacagcaggacaaatgcttcttgtgtggtcaggttggacatctagcagcaaactgtgaaggaaaggttaagagaaaagctggggagtttgatgaaaaaggtgaagctattgttccaaagaaaccttaccaggtaatattgtctctttcctttgttgcaatttgtggtctaataagtacactttatgaatttgctgaggaccttgttttattttaattgctccttgtgtgacattgcagttcttgaatatatggaccctccgggagtacttagaatatgagttcagaatgcagaatccacctttcccgattgactttgaacgcatcgttgatgatttcatcttcatgtgtttttttgttggcaatgattttcttccacatatgccaacattagagattcgtgaggtttgttacctgttgtaaagctaaatgttttactggatatcttcgtttgaagctagtagctatgaaattatcagattactacttactagtaaattggatatttattttattcctgcttacagttctcttgtagatttgttattgcatgatgttaacttggcttttctgcagggagctattaacttgctaatggctgtatacaagaaggaatttccttccatgggtggctatctaactgatgcttgcacggtaattaaaaagccactcctattgaagttacccatttgtgtgtgtgtgtgtgtgtgtgtgtttgtttgcagaaagtagtattttattccaactgatccaagttggtatttcagtattaacatgtttttcatctgttacattagccggatctgaataaagttgaacactttattcaagcagttggctcctacgaggataaaatatttcagaaaagagctcgtttgcatcaggtgattttattttattttactccttagccttttcaattcccttgttatcatgttatcatctggcacctaatctttatttttactccatgccactatgcgccaaggggttcaccattagctatcagttgaaatttctgtttgtatttggcaatgtaatttccttatttgcaaagttcattgagtgtttattttgatatactggtaatttcagcctgatgtactgcgttatatcttctatgacatgttgtctataaacttccttcaaattggaggtagtgattgtgaatttgccacctgccaccaatagtccaacacactgcatttcttactaattgctccgtgtattgttttaatattacaccgtatatcttctctatgctgctttcttcttagctagccttgtaaattcacaatataacatggaaaggttcacaatgaccagataatccttgacatgtaggttagtgtttttttttttacaatacctctaaagaagttaattctacaattagcatgtgtgaacactgccaatccttgaaaagaagtaaatgctatgctccgtagaaatcacattatgttttgaacaatattgagacatttttgattcccatttagctagtaaaatcagaaaaaccagttgattgttcaagtatcttctaaactagttatttgttcaaggttttctcccccatactttcccctagaatttaaatgttacccatggaaaacttctgcatgcagcgtaccacgtccgtatggcttaggcatgttccatcattatttatccttagttatgcaaagccttctgatatgatcaacatgaactcttgagaaataaatgtttgcaacactattctatatatctggcggtcaaatattcaacaagtcattgatgttaagttcatatccttgtgtagcgtcaagctgaaaggataaaacgagaaaaggcccaagcaaaacgaggggatgacctggatccccatgtcagggatgatcttattgtacctgttgcacgcttccaagggtctcgccttgcatctggacctgtgccttcaccatatgaacaaaatggatctgacaaaaacaatgggggaaaaaatagtcgtgctcggaaagctgcacgggtatcatcgtcaggttcaagcattgcggctgctattgttgaagctgaaaatgaccttgaagcacaggtagctcatttcatctggctccaggagaatttatatttgtttttgaagaaacatttttgtgattttatctgacacttgttcctgtatctttcttaggaacgcgaaaacaaggaagatttgaagacaatgcttaaagatgcacttcgtgagaaatctgatgtttttaattctgaaaatccagaggaggacaaggttagtgtttacacacaagtcatgccactgctgtgctggaccttattatacgtttaattaaagtgtttactttccttttattttaactcatttactttctattagctatttgtttaaatgttttcaatttagtcataacattgtttgtcttctcagataaaacttggagaaccaggatggagggaaaggtactatgaagagaagtttggagcaagaacacccgggcagattgaagaaatacgcagagatgtcgtaagtgtcttgaatacctttgaattactgcattgcctgataatggtgtcatgatgatctattgctgttaatatatagttgtacaaacttccataaaagatgccatttcatcgctatttgagcatgtactcatttattatcttatatgtatgatgtgccctattcatcttcttcaggttctgaaatatactgaaggtttgtgttgggtaatgcactactattatgaaggtgtctgctcgtggcaatggtaatttagcttgagttggtcaatataggttgaattgtgtaaaggtttattttcaactctttgtcaatggccttaaattgttatctgtctacctcaccatgcacaggttttacccttaccattatgctccttttgcttcggatttgagtggtctaggtcaactcaatataacttttgaacttgggtcaccattcaaaccgtttgatcaacttatgggagttttcccagctgctaggtgaatacactaagataatgttccctagatcccagttccttaatgttgtggattttttgtaaaggttgtggcattacatttcagctcccatgcactccctgtacagtatcggcaattgatgacagatgcaaattcaccaataattgatttttatccaactggtatgcttatatttgtgatgtttgatatattttttattacctttccactttataattttacactgttttcacccatttgtgatgcagattttgaagtagatatgaatgggaagaggtattcatggcaggtaaattgattataatagggcatatatttatgtaatgtaagtataccttcatgtttaatctatatacttgaatttggcaggggatagcaaaactgcccttcattgatgaagcccggttgctagctgaaattaaaaaagttgagcatactttgacggtatggcaacaaaacagattgtcattcagttgtgcttttataatccatggaataggagatcttgttctaagatatgcatcgcttttcttaccttctgtacagcctgaagaagcaaggagaaacagtatcatgttcaatatgctttttgtgaatggctcccatccactttcgccttatatctactccctcaacagcaaatttggacacctacctgacagagagcgaaatgaaattaaagaaaagattgatccttcttctaggttagctaaccctattaggatccttgatttactgcaaatgctatttttattagtttaaaagcatatggcatttgcactgaccagtgttgtagattctgtaatgccttctgtgtcaggcaaaagttctggctagcataggccactgaattgtttttttcttcttattatttccttaacgcagctgccttgttttgtgcagtggaggaatgaatggttacatctcactttgtagtggggatccgtgccctcctgtcttcaggtctcctgttgatgggttggaggatatcatggacaatcaagtgatgtaagttcaatcccttctgggaaattaagataatatgatttattggcaatctaatttaccatcatgtcatctgtcttaattagatgtacaatctacaagcttccggattctcataagcacatcgctcgtccacctgttggtgtaatcatacccaagaaggtacatctctatcatttttgtctagtatcaacactagtaacatctttccacttgagaaatggtaataacaaataagtaaactctgcagactgttgaagctactgacctgaaaccaccacctgtgctatggcatgaagacagtggtaggaggcctcatgataataacaacaggaggccttatgaaaacagcaacaggtacactatctaccttttgtgttattttgtcaatccttgcaacgtcattgaaaatcctaaccttctggtgaaattgtttaggcaaaacccagctggagcaatatctggccgccaacttggggaagctgcccaccgacttgtggtgaacagcttgaatgctcggagtggcggacaatacaataccccatcgatgccatatcaaaccataatgaatggcatgccttatccaaatgggattccaccaaggatggagcagcctgctcctggctggcatgttcctggtgatctaccaaatggtcaggtaccaccagcttatgcatcatcatcaggtcattatcagaacgataggtctgggccttctcagtatggacgagataaccatggaaggtacccatatgcaagagacaaccaccatgattcaagaggaagggttccaccataccatcagagcggtggaaactcgtatcaatcacattctgctccatcagcaggtcctggacggtatgcgcaacccccaccatatgctggggggtatggtaggagctaccagcctgcaccgtatggaggtggtcagcagtggcagcagcagcagcaacaaccttatggctcctatgctgggtcagggccttatgggggtggggcacctcctgcaaggcctaattcacgaccacagcagtcgcagaaccgttacaataccttagataggaattctaacaggagacctccaccaggtcatgggcgacactaagcccaacctctgtttgttgtacctgtggttttgttgttagaaaacctgcgtactaaaatagagaacctcagcctagtaaaacagagaacctcagcttagagatatatatagagcaatttgcatagtctcgtgatcgacaagctgttatagcatcaaaggttctaagaggcatgtgttgtacaatagaattgtcagttcatcagatactggtggctgactgccgtttttcatttgtggcactcattattttagccccctaaggttgggaatatgtttaacaagttttgtatttttaagataataatgttctaggttaaatttcagttttggtggatatatgtcaaaatcttgtattcttttcttatttataatggaattgtggttttccctct</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051482.1 RefSeq:Os01g0872700]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
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Annotated Information
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Structured Information
