Difference between revisions of "Os01g0872700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0872700| Description = Putative 5-3 exonuclease domain containing protein| Version = NM_001051482.1 GI:115441334 GeneID:4324952| Length = 7...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os01g0872700|
 
−
Description = Putative 5-3 exonuclease domain containing protein|
 
−
Version = NM_001051482.1 GI:115441334 GeneID:4324952|
 
−
Length = 7797 bp|
 
−
Definition = Oryza sativa Japonica Group Os01g0872700, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
+
Please input expression information here.
−
AP = Chromosome 1:39600841..39608637|
+
 
−
CDS = 39601233..39601899,39601981..39602087,39602176..39602251,39602335..39602439,39602639..39602796<br>,39602899..39602973,39603054..39603094,39603182..39603258,39603343..39603471<br>,39603578..39603648,39603825..39603920,39604077..39604172,39604269..39604541<br>,39605459..39605545,39605689..39605766,39605938..39606102,39606210..39606356<br>,39606509..39606571,39606670..39606789,39606940..39607131,39607260..39607336<br>,39607682..39607784,39608272..39608475|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008394:39600841..39608637
+
 
−
source=RiceChromosome01
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008394:39600841..39608637
+
 
−
source=RiceChromosome01
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atgggtgtgccggcgttctaccggtggctggcggagaagtacccgatggtggtggtggacgtggtggaggaggaggcggtggagatcgagggcgtcaaggtgcccgtcgacacctccaagcccaaccccaacggcctcgagttcgacaacctctacctcgacatgaacgggatcattcacccctgcttccaccccgaggataggccctctccgacaacattcgctgaggttttccagtgcatgtttgattatatcgataggctatttgtcatggttcgccctcggaagcttatgtatatggccattgatggtgttgctcctcgtgccaagatgaaccagcaacgctctagacgattcagagctgcaaaagatgctgctgatgcggccgcagaagaagagaggttgcgtgaagagtttgagagggaaggcagaaaacttccaccaaaacagcaatctcaaacatgtgattctaacgttattactccaggaacagagtttatggctgttttatcgattgctttgcagtactacatccatctcaggttgaattatgatcctggatggaaacaagttaaagttattctttctgatgccaatgttcctggtgaaggggaacataaaattatgtcctacattcgcggtcaacggaatctccctggatttaacccaaatactcgccattgtttgtatggcctggatgcagacctgatcatgttagctcttgcaacacacgaagtacatttctctatactgagagaggtagtttatacacctggacagcaggacaaatgcttcttgtgtggtcaggttggacatctagcagcaaactgtgaaggaaaggttaagagaaaagctggggagtttgatgaaaaaggtgaagctattgttccaaagaaaccttaccagttcttgaatatatggaccctccgggagtacttagaatatgagttcagaatgcagaatccacctttcccgattgactttgaacgcatcgttgatgatttcatcttcatgtgtttttttgttggcaatgattttcttccacatatgccaacattagagattcgtgagggagctattaacttgctaatggctgtatacaagaaggaatttccttccatgggtggctatctaactgatgcttgcacgccggatctgaataaagttgaacactttattcaagcagttggctcctacgaggataaaatatttcagaaaagagctcgtttgcatcagcgtcaagctgaaaggataaaacgagaaaaggcccaagcaaaacgaggggatgacctggatccccatgtcagggatgatcttattgtacctgttgcacgcttccaagggtctcgccttgcatctggacctgtgccttcaccatatgaacaaaatggatctgacaaaaacaatgggggaaaaaatagtcgtgctcggaaagctgcacgggtatcatcgtcaggttcaagcattgcggctgctattgttgaagctgaaaatgaccttgaagcacaggaacgcgaaaacaaggaagatttgaagacaatgcttaaagatgcacttcgtgagaaatctgatgtttttaattctgaaaatccagaggaggacaagataaaacttggagaaccaggatggagggaaaggtactatgaagagaagtttggagcaagaacacccgggcagattgaagaaatacgcagagatgtcgttctgaaatatactgaaggtttgtgttgggtaatgcactactattatgaaggtgtctgctcgtggcaatggttttacccttaccattatgctccttttgcttcggatttgagtggtctaggtcaactcaatataacttttgaacttgggtcaccattcaaaccgtttgatcaacttatgggagttttcccagctgctagctcccatgcactccctgtacagtatcggcaattgatgacagatgcaaattcaccaataattgatttttatccaactgattttgaagtagatatgaatgggaagaggtattcatggcaggggatagcaaaactgcccttcattgatgaagcccggttgctagctgaaattaaaaaagttgagcatactttgacgcctgaagaagcaaggagaaacagtatcatgttcaatatgctttttgtgaatggctcccatccactttcgccttatatctactccctcaacagcaaatttggacacctacctgacagagagcgaaatgaaattaaagaaaagattgatccttcttctagtggaggaatgaatggttacatctcactttgtagtggggatccgtgccctcctgtcttcaggtctcctgttgatgggttggaggatatcatggacaatcaagtgatatgtacaatctacaagcttccggattctcataagcacatcgctcgtccacctgttggtgtaatcatacccaagaagactgttgaagctactgacctgaaaccaccacctgtgctatggcatgaagacagtggtaggaggcctcatgataataacaacaggaggccttatgaaaacagcaacaggcaaaacccagctggagcaatatctggccgccaacttggggaagctgcccaccgacttgtggtgaacagcttgaatgctcggagtggcggacaatacaataccccatcgatgccatatcaaaccataatgaatggcatgccttatccaaatgggattccaccaaggatggagcagcctgctcctggctggcatgttcctggtgatctaccaaatggtcaggtaccaccagcttatgcatcatcatcaggtcattatcagaacgataggtctgggccttctcagtatggacgagataaccatggaaggtacccatatgcaagagacaaccaccatgattcaagaggaagggttccaccataccatcagagcggtggaaactcgtatcaatcacattctgctccatcagcaggtcctggacggtatgcgcaacccccaccatatgctggggggtatggtaggagctaccagcctgcaccgtatggaggtggtcagcagtggcagcagcagcagcaacaaccttatggctcctatgctgggtcagggccttatgggggtggggcacctcctgcaaggcctaattcacgaccacagcagtcgcagaaccgttacaataccttagataggaattctaacaggagacctccaccaggtcatgggcgacactaa</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPN                    GLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAI                    DGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVI                    TPGTEFMAVLSIALQYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNL                    PGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAAN                    CEGKVKRKAGEFDEKGEAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDD                    FIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPDLNKVEHF                    IQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSR                    LASGPVPSPYEQNGSDKNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENK                    EDLKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRD                    VVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFD                    QLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFID                    EARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERN                    EIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKH                    IARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRRPHDNNNRRPYENSNRQNPAGAISG                    RQLGEAAHRLVVNSLNARSGGQYNTPSMPYQTIMNGMPYPNGIPPRMEQPAPGWHVPG                    DLPNGQVPPAYASSSGHYQNDRSGPSQYGRDNHGRYPYARDNHHDSRGRVPPYHQSGG                    NSYQSHSAPSAGPGRYAQPPPYAGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPY                    GGGAPPARPNSRPQQSQNRYNTLDRNSNRRPPPGHGRH</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
−
DNA = <dnaseqindica>6739..7405#6551..6657#6387..6462#6199..6303#5842..5999#5665..5739#5544..5584#5380..5456#5167..5295#4990..5060#4718..4813#4466..4561#4097..4369#3093..3179#2872..2949#2536..2700#2282..2428#2067..2129#1849..1968#1507..1698#1302..1378#854..956#163..366#cctcccctccccgcccgcgtggcctacccccttcgttagggtttcgcgccctcttccctctctcccttcccctcggccgtcggcccggctcctcgcggcggcggcggcggcggctcgctttctagggttagggttagggttccggcggcggaggaggaggagatgggtgtgccggcgttctaccggtggctggcggagaagtacccgatggtggtggtggacgtggtggaggaggaggcggtggagatcgagggcgtcaaggtgcccgtcgacacctccaagcccaaccccaacggcctcgagttcgacaacctctacctcgacatgaacgggatcattcacccctgcttccaccccgaggatagggtacgtcgatgttttttttttgggcgtttctgtttgcgtagctctggggtttgtttgggtgttcgtatggtgtccctccgctgtacaggtgatggatttgtgtatgcctgattgatgtacgacggagctgtggcagaggagatagtttggtgaaatgattttgtagcttcctgttttgtaatttacctgagcgttaaacataattttgcaaataaccacaaactgctaaattgccacatgagccatcttaggatgaggatgctgctgtagtttaatcttcaaactctgcatcgcaaatttgttaatttgcctttttgagttatgtttattttcattcggtggacgcaccagtttagactgcatgatgctactctgtcattgccctgcatttctcttcgaacaaatattttaatgtttactgattgctcaagtgctttctgatttctctgctgaccatgatttcttgctattgtgttatcttttacagccctctccgacaacattcgctgaggttttccagtgcatgtttgattatatcgataggctatttgtcatggttcgccctcggaagcttatgtatatggccattggtacgtataacatctgatgtgtaggaattctcttactacctttttccttcctaaaggattaggagtgtttagtgtcattgctcttttacctgttggtcatcatcatagaacagcttgccatactgccaactaatgcctttgttgaagttagctatatactatgacgagtcatttacatgagttttgaatcaggcataatcctcacccgtaaactatttatttggcagcatagtacctgtgcttgtaaacttttgctgtccagggtcctgttttttaccacatatgttttgttcttgtcgatggtttcttgttgatattttgtattatcttacaatggttttacagatggtgttgctcctcgtgccaagatgaaccagcaacgctctagacgattcagagctgcaaaagatgctgctgatgcggtcagtattctagtgaaattatcttcctttatgcagtgtatgataatatgtcgacatttaaattcccattcatcgacggcttcaaggggtagaattgcatttatggcttattatttttctatctccaggccgcagaagaagagaggttgcgtgaagagtttgagagggaaggcagaaaacttccaccaaaacagcaatctcaaacatgtgattctaacgttattactccaggaacagagtttatggctgttttatcgattgctttgcagtactacatccatctcaggttgaattatgatcctggatggaaacaagttaaagtaagcatggttttaagcctatcagttttgttttggcattacattctgtcagtatgttccatatgttaacttcacaaactctaaggtttacattgattggaaaggcaagtatgaaaaagtcatgtgtgttctggttaaattcttttgaaggttattctttctgatgccaatgttcctggtgaaggggaacataaaattatgtcctacattcgcggtcaacggaatctccctggatttaacccaaatactcgccattgtttgtatggcctggtatgttctataaacctattttttatatattttaattgggcaatgtttcttctgttggtcctgctaatgcatttttttatatatactcttgaatgcaggatgcagacctgatcatgttagctcttgcaacacacgaagtacatttctctatactgagagaggttagctctcctcaggacctagaatcaatgcctttttgtgtaaatacattttaccatgttatgctaactaaaagagcggattagttccttatgctttcttgtttatgttatttgttttctctctcttctgactatattttggtttcttgcaggtagtttatacacctggacagcaggacaaatgcttcttgtgtggtcaggttggacatctagcagcaaactgtgaaggaaaggttaagagaaaagctggggagtttgatgaaaaaggtgaagctattgttccaaagaaaccttaccaggtaatattgtctctttcctttgttgcaatttgtggtctaataagtacactttatgaatttgctgaggaccttgttttattttaattgctccttgtgtgacattgcagttcttgaatatatggaccctccgggagtacttagaatatgagttcagaatgcagaatccacctttcccgattgactttgaacgcatcgttgatgatttcatcttcatgtgtttttttgttggcaatgattttcttccacatatgccaacattagagattcgtgaggtttgttacctgttgtaaagctaaatgttttactggatatcttcgtttgaagctagtagctatgaaattatcagattactacttactagtaaattggatatttattttattcctgcttacagttctcttgtagatttgttattgcatgatgttaacttggcttttctgcagggagctattaacttgctaatggctgtatacaagaaggaatttccttccatgggtggctatctaactgatgcttgcacggtaattaaaaagccactcctattgaagttacccatttgtgtgtgtgtgtgtgtgtgtgtgtttgtttgcagaaagtagtattttattccaactgatccaagttggtatttcagtattaacatgtttttcatctgttacattagccggatctgaataaagttgaacactttattcaagcagttggctcctacgaggataaaatatttcagaaaagagctcgtttgcatcaggtgattttattttattttactccttagccttttcaattcccttgttatcatgttatcatctggcacctaatctttatttttactccatgccactatgcgccaaggggttcaccattagctatcagttgaaatttctgtttgtatttggcaatgtaatttccttatttgcaaagttcattgagtgtttattttgatatactggtaatttcagcctgatgtactgcgttatatcttctatgacatgttgtctataaacttccttcaaattggaggtagtgattgtgaatttgccacctgccaccaatagtccaacacactgcatttcttactaattgctccgtgtattgttttaatattacaccgtatatcttctctatgctgctttcttcttagctagccttgtaaattcacaatataacatggaaaggttcacaatgaccagataatccttgacatgtaggttagtgtttttttttttacaatacctctaaagaagttaattctacaattagcatgtgtgaacactgccaatccttgaaaagaagtaaatgctatgctccgtagaaatcacattatgttttgaacaatattgagacatttttgattcccatttagctagtaaaatcagaaaaaccagttgattgttcaagtatcttctaaactagttatttgttcaaggttttctcccccatactttcccctagaatttaaatgttacccatggaaaacttctgcatgcagcgtaccacgtccgtatggcttaggcatgttccatcattatttatccttagttatgcaaagccttctgatatgatcaacatgaactcttgagaaataaatgtttgcaacactattctatatatctggcggtcaaatattcaacaagtcattgatgttaagttcatatccttgtgtagcgtcaagctgaaaggataaaacgagaaaaggcccaagcaaaacgaggggatgacctggatccccatgtcagggatgatcttattgtacctgttgcacgcttccaagggtctcgccttgcatctggacctgtgccttcaccatatgaacaaaatggatctgacaaaaacaatgggggaaaaaatagtcgtgctcggaaagctgcacgggtatcatcgtcaggttcaagcattgcggctgctattgttgaagctgaaaatgaccttgaagcacaggtagctcatttcatctggctccaggagaatttatatttgtttttgaagaaacatttttgtgattttatctgacacttgttcctgtatctttcttaggaacgcgaaaacaaggaagatttgaagacaatgcttaaagatgcacttcgtgagaaatctgatgtttttaattctgaaaatccagaggaggacaaggttagtgtttacacacaagtcatgccactgctgtgctggaccttattatacgtttaattaaagtgtttactttccttttattttaactcatttactttctattagctatttgtttaaatgttttcaatttagtcataacattgtttgtcttctcagataaaacttggagaaccaggatggagggaaaggtactatgaagagaagtttggagcaagaacacccgggcagattgaagaaatacgcagagatgtcgtaagtgtcttgaatacctttgaattactgcattgcctgataatggtgtcatgatgatctattgctgttaatatatagttgtacaaacttccataaaagatgccatttcatcgctatttgagcatgtactcatttattatcttatatgtatgatgtgccctattcatcttcttcaggttctgaaatatactgaaggtttgtgttgggtaatgcactactattatgaaggtgtctgctcgtggcaatggtaatttagcttgagttggtcaatataggttgaattgtgtaaaggtttattttcaactctttgtcaatggccttaaattgttatctgtctacctcaccatgcacaggttttacccttaccattatgctccttttgcttcggatttgagtggtctaggtcaactcaatataacttttgaacttgggtcaccattcaaaccgtttgatcaacttatgggagttttcccagctgctaggtgaatacactaagataatgttccctagatcccagttccttaatgttgtggattttttgtaaaggttgtggcattacatttcagctcccatgcactccctgtacagtatcggcaattgatgacagatgcaaattcaccaataattgatttttatccaactggtatgcttatatttgtgatgtttgatatattttttattacctttccactttataattttacactgttttcacccatttgtgatgcagattttgaagtagatatgaatgggaagaggtattcatggcaggtaaattgattataatagggcatatatttatgtaatgtaagtataccttcatgtttaatctatatacttgaatttggcaggggatagcaaaactgcccttcattgatgaagcccggttgctagctgaaattaaaaaagttgagcatactttgacggtatggcaacaaaacagattgtcattcagttgtgcttttataatccatggaataggagatcttgttctaagatatgcatcgcttttcttaccttctgtacagcctgaagaagcaaggagaaacagtatcatgttcaatatgctttttgtgaatggctcccatccactttcgccttatatctactccctcaacagcaaatttggacacctacctgacagagagcgaaatgaaattaaagaaaagattgatccttcttctaggttagctaaccctattaggatccttgatttactgcaaatgctatttttattagtttaaaagcatatggcatttgcactgaccagtgttgtagattctgtaatgccttctgtgtcaggcaaaagttctggctagcataggccactgaattgtttttttcttcttattatttccttaacgcagctgccttgttttgtgcagtggaggaatgaatggttacatctcactttgtagtggggatccgtgccctcctgtcttcaggtctcctgttgatgggttggaggatatcatggacaatcaagtgatgtaagttcaatcccttctgggaaattaagataatatgatttattggcaatctaatttaccatcatgtcatctgtcttaattagatgtacaatctacaagcttccggattctcataagcacatcgctcgtccacctgttggtgtaatcatacccaagaaggtacatctctatcatttttgtctagtatcaacactagtaacatctttccacttgagaaatggtaataacaaataagtaaactctgcagactgttgaagctactgacctgaaaccaccacctgtgctatggcatgaagacagtggtaggaggcctcatgataataacaacaggaggccttatgaaaacagcaacaggtacactatctaccttttgtgttattttgtcaatccttgcaacgtcattgaaaatcctaaccttctggtgaaattgtttaggcaaaacccagctggagcaatatctggccgccaacttggggaagctgcccaccgacttgtggtgaacagcttgaatgctcggagtggcggacaatacaataccccatcgatgccatatcaaaccataatgaatggcatgccttatccaaatgggattccaccaaggatggagcagcctgctcctggctggcatgttcctggtgatctaccaaatggtcaggtaccaccagcttatgcatcatcatcaggtcattatcagaacgataggtctgggccttctcagtatggacgagataaccatggaaggtacccatatgcaagagacaaccaccatgattcaagaggaagggttccaccataccatcagagcggtggaaactcgtatcaatcacattctgctccatcagcaggtcctggacggtatgcgcaacccccaccatatgctggggggtatggtaggagctaccagcctgcaccgtatggaggtggtcagcagtggcagcagcagcagcaacaaccttatggctcctatgctgggtcagggccttatgggggtggggcacctcctgcaaggcctaattcacgaccacagcagtcgcagaaccgttacaataccttagataggaattctaacaggagacctccaccaggtcatgggcgacactaagcccaacctctgtttgttgtacctgtggttttgttgttagaaaacctgcgtactaaaatagagaacctcagcctagtaaaacagagaacctcagcttagagatatatatagagcaatttgcatagtctcgtgatcgacaagctgttatagcatcaaaggttctaagaggcatgtgttgtacaatagaattgtcagttcatcagatactggtggctgactgccgtttttcatttgtggcactcattattttagccccctaaggttgggaatatgtttaacaagttttgtatttttaagataataatgttctaggttaaatttcagttttggtggatatatgtcaaaatcttgtattcttttcttatttataatggaattgtggttttccctct</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051482.1 RefSeq:Os01g0872700]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 1]]
 
−
[[Category:Chromosome 1]]
 

Latest revision as of 05:03, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information