|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0881000|
| |
| − | Description = Zinc finger, FYVE/PHD-type domain containing protein|
| |
| − | Version = NM_001051531.1 GI:115441432 GeneID:4324846|
| |
| − | Length = 8417 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0881000, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:39984659..39993075|
| |
| − | CDS = 39984659..39985296,39985383..39985410,39985538..39985658,39985794..39985906,39986012..39986094<br>,39986456..39986518,39986688..39986842,39986999..39987168,39987689..39987777<br>,39987892..39988084,39988243..39988367,39988657..39989063,39989443..39989507<br>,39990002..39990280,39990360..39990433,39990829..39990880,39990954..39991061<br>,39991459..39991560,39991688..39991761,39991850..39992023,39992255..39992359<br>,39992455..39992565,39992952..39993075|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008394:39984659..39993075
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008394:39984659..39993075
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgccgccggcgagaggcgggaggcgtgggagggggcgaggtaggcgaggtggacgcggaggcgccgcctctagggcgcgaggcgagaacgtcgtagacgtcgagccgatcaagctcggtgatgatgatgcgaaggtagatccacagacgaagtcacctaacgaagaaataacaagcgcggaggtttgcgaggtggagacctctgaggctagcccgcttggtgccccggaggaagatgaggggaagccaggttccactaggaacctgaagcgtcttcggaagacgatcacgatcgattccgcagccgctgaggagcatggggcagagagtgacgatgaagagtttgatgttcttgccacagcaagttgccaagagttggctccatgcagaaggtccaagcgcctaaggtgcaaaccaactaggaagaggtccaaaccaactgggaagagggatttgggtggcaaggagagtgaagatgatgtatttgcaaatagctcgagcagttcccaggatgacgccgggaagttagcttctagaagatcaaagcgtctcagggagaggcttacatctgattattttgatggtgatatgaaaattgttcggctccccgccgaggatcaaaacgccttcggaacagactgggccccagaaatatttcatatgctgatgatgatagcgacaccgatgatacatgttacattaactactgaaattaccacagatcgcaagaagattgtcccatgcaggagaacgtcaaagcgcctacaggagaagcggaaagctcatgatgtttcagaggagagttacactgaagcttcgtcttgcatgttgtcgacttcttcttcatcagatgatgaattattgcacaattctataaaacctggcagacgtaattcgggtggacctagttgttcgatctgtaagattggaattgcctgctctttcctcatcaaatgcaagaattccacttgttctcgtagcttccacaccttttgtcttgatcctcctttgcaagagattataggcacctgggaatgttcttggtgcaaaagcaatgcagcaccagcagtcaaggtgacagaagtgttaacatcaaaaaaaatccaaagacttgttggccacagacgaattcttcaggaggcagatttccagtatcaattcctcgtgaaatggcaatctctttctcatcatcatgactgctgggttccgcttgaatggcttcatgtatctgatcctttacgagtacagagctatctaaacaagaactgcttgcctaaggaagtttattcagaggatcaaaggaagcttgagtggtttgaagtagatcatgccattgcatgtcggaggaagttccatcatgaaggtttatgtgatgtcttggctactttccaggataaccaagatttcgacgggtatgagttccttgtgaaatggaagggccttgattactgtgaagctacatgggagccatgttgtaccgatggtgtgcaacaggctgtttctatgcttgtcaggaggcataaaaatgcttcaaaaagagttaacatcagccaaacatgtctagatggatcaaaaatagaagaggtgcactgtggtgctctatatgactatcaacttcaaggtttacaatggttaatagataacttcaaaactaggagaagcgttattcttgctgatgaaatgggtcttgggaaaaccgttcaagttgtttgctttctgtaccacattattaaggaaagtttgactgcatccccagcattgatccttgctccaaagagcatcctcctgcaatgggaaaaggaattttgccagtgggctagtgatcttaatgttattgtttatcaaggagacagagactctcgaaagtgtatccaagtccatgaaatgtactcttctgatgggaaacctttatttgatgctctagtgacgagttatgagtttgtccaaattgacaaggcagttctacagaaattcaagtggtctacaattgtcattgacgaggctcacagaatgaagaagcttgactgcaaccttgcagcttgcctaaaacgatactgctctgaatttcggttgctccttacgggaacaccgttacaaaataacatcatggaactgttttctttgcttcattatattgatccggatgagttctctgatccaaaggctgatggattgttctcaccaattgaatctggaagggatttgacaatggatgaaaaagttgctaggattcacaatattttaaagcccaggatgttgcggagaatgaaatctgatgttctaacagattctatgccagtaaagaagtgggttgaagttccatgtgcacttgcagattcccagagagaactttacattaatattttagagaggaattactcaaagcttaacagtgccattcggaatggcagaaaactttctctgaacaacatacttatggaactcagaaaatgctgcaatcatccagtaggacttgaagttggacagcaagcaactgaagatgtgtttttatcacttattgcttcatcaggcaaacttcaacttcttcataagttgctcccaagattgaaagaaaggggaaatcgtgtactgattttctcgcagatgaccaggatgcttgacattcttgaggattttctttgttccctgggatacaaatatgcacgcatcgatgggcagacatcactctctgctaggcaggagagcatagaagagtacaaaaacattgatagtgaaacatttattttcttgatgtcaactcgtgctggtggcatgggagttgacctgcctggtgcagatagggtaattatatacgatcctgacttcaatccatttatggacttgcaagcacaatctcgggctcatcggatcgggcagacaagaccagtggttgtttaccaactcattacaaagtgttctgtcgaggaaaagatactgcagaagtcaaagcagaagttggccatcgaaaatatgttgatgaactcttccaagaagccaagtgctgatgagttgcagtctatattactccatggagcaaagacaattgtggacaggaagatcagtgcaacatccatccattatgacaatgaagccattgagaatctcctcaagttagacccttccactggtgagaaatgctcgtcggatgataacggttatcttggcagcattgtgagctttgctcatggcgtcgaggatgaagcaccttcttccccaaaggttgaggatctgaaagttctcaagcctgctactcccaaggttgatctcggccgtgggaagaggcaaaggaaagtcgtgaactacgctgacgaggttgagaatgaagacagtgatgatatgtatgccccggaaggttcgtcgacttccgaattcagcagttcgtcctccgatgatgaaactgacagcgctctgcagctgcaaatagttacagtaccggacattgatgcagattag</cdnaseq>|
| |
| − | AA = <aaseq>MPPARGGRRGRGRGRRGGRGGAASRARGENVVDVEPIKLGDDDA KVDPQTKSPNEEITSAEVCEVETSEASPLGAPEEDEGKPGSTRNLKRLRKTITIDSAA AEEHGAESDDEEFDVLATASCQELAPCRRSKRLRCKPTRKRSKPTGKRDLGGKESEDD VFANSSSSSQDDAGKLASRRSKRLRERLTSDYFDGDMKIVRLPAEDQNAFGTDWAPEI FHMLMMIATPMIHVTLTTEITTDRKKIVPCRRTSKRLQEKRKAHDVSEESYTEASSCM LSTSSSSDDELLHNSIKPGRRNSGGPSCSICKIGIACSFLIKCKNSTCSRSFHTFCLD PPLQEIIGTWECSWCKSNAAPAVKVTEVLTSKKIQRLVGHRRILQEADFQYQFLVKWQ SLSHHHDCWVPLEWLHVSDPLRVQSYLNKNCLPKEVYSEDQRKLEWFEVDHAIACRRK FHHEGLCDVLATFQDNQDFDGYEFLVKWKGLDYCEATWEPCCTDGVQQAVSMLVRRHK NASKRVNISQTCLDGSKIEEVHCGALYDYQLQGLQWLIDNFKTRRSVILADEMGLGKT VQVVCFLYHIIKESLTASPALILAPKSILLQWEKEFCQWASDLNVIVYQGDRDSRKCI QVHEMYSSDGKPLFDALVTSYEFVQIDKAVLQKFKWSTIVIDEAHRMKKLDCNLAACL KRYCSEFRLLLTGTPLQNNIMELFSLLHYIDPDEFSDPKADGLFSPIESGRDLTMDEK VARIHNILKPRMLRRMKSDVLTDSMPVKKWVEVPCALADSQRELYINILERNYSKLNS AIRNGRKLSLNNILMELRKCCNHPVGLEVGQQATEDVFLSLIASSGKLQLLHKLLPRL KERGNRVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSLSARQESIEEYKNIDSETF IFLMSTRAGGMGVDLPGADRVIIYDPDFNPFMDLQAQSRAHRIGQTRPVVVYQLITKC SVEEKILQKSKQKLAIENMLMNSSKKPSADELQSILLHGAKTIVDRKISATSIHYDNE AIENLLKLDPSTGEKCSSDDNGYLGSIVSFAHGVEDEAPSSPKVEDLKVLKPATPKVD LGRGKRQRKVVNYADEVENEDSDDMYAPEGSSTSEFSSSSSDDETDSALQLQIVTVPD IDAD</aaseq>|
| |
| − | DNA = <dnaseqindica>7780..8417#7666..7693#7418..7538#7170..7282#6982..7064#6558..6620#6234..6388#5908..6077#5299..5387#4992..5184#4709..4833#4013..4419#3569..3633#2796..3074#2643..2716#2196..2247#2015..2122#1516..1617#1315..1388#1053..1226#717..821#511..621#1..124#atgccgccggcgagaggcgggaggcgtgggagggggcgaggtaggcgaggtggacgcggaggcgccgcctctagggcgcgaggcgagaacgtcgtagacgtcgagccgatcaagctcggtgatggtgagtaggctggatctgggttctggacgcgatcggttttgggggattttgttcgggctagtgatcgatctgggggttttgggggtttttgttactgtgcgtttggttggttcgagagtttgtaaaatcaaaccgttggggattcggattttattaggggatttctggtggattttttttgggttcaggattgtaaggaagtagcattgctgtttttacgtcctccgatcggttcttgatgaggctgggaacggtttcccccctccatttgtgtgctcttcgcgtatttggaggagagcgctatattctgtggcggaagtatgaaatacatttttgatcaaggcgttcgaaactccgtaacattctgatccccacatatttggcagatgatgcgaaggtagatccacagacgaagtcacctaacgaagaaataacaagcgcggaggtttgcgaggtggagacctctgaggctagcccgcttggtgccccggaggaaggtgagattgaaagttcaaacttctcggacggcacggggttggtaatttgttatacccttatcgtttcggcttaatcccggtttcgatttatgcagatgaggggaagccaggttccactaggaacctgaagcgtcttcggaagacgatcacgatcgattccgcagccgctgaggagcatggggcagagagtgacgatgaaggtgagtgacggagtttgcttagctgacaatttctcggaattacgggtgccgcttgtcctgttaatgtgtagtacggttgtttgcattgtgttcaccttggttgtgctcagttttgatttgttttggcaaaatgaacactatataaaactccagatgttggtatttgcaatattagtctagaatgttgtatagctagtcattattattgtttgttttgacctgttgatttagagtttgatgttcttgccacagcaagttgccaagagttggctccatgcagaaggtccaagcgcctaaggtgcaaaccaactaggaagaggtccaaaccaactgggaagagggatttgggtggcaaggagagtgaagatgatgtatttgcaaatagctcgagcagttcccaggatggtaacagtgttatttacaatatattctgtcttgctgatcctaataaatttgtttggttgaagatttattccagattgatattttacagacgccgggaagttagcttctagaagatcaaagcgtctcagggagaggcttacatctgattattttgatggtgatgtgggtgaagacagacaccctgggaagtagctctgatgattatggtattgttacaattctcaactattgcatgatttctgatatgctgccagtctgctactacaaatgtaaaatttgcattatgtagatgaaaattgttcggctccccgccgaggatcaaaacgccttcggaacagactgggccccagaaatatttcatatgctgatgatgatagcgacaccgatgatagtaagtgggcaccctttgttatggcttgacataattgacccttttgtttgcagatcatgtgattttgtaattaacttcaatccagtttatttgggaaattggataacttgtagtttctcttctgctagaaagtcttaattgacataattaaaaaatactttgaaatattgtttaaccaaggatgcatttaaaacaatgtgaatagagtttttttacggaatggaagaaactatctattttcctcaatgcattctttttcaatatatatcttcattgatttgtgcactatgtgaaacttgcacctttcctatttacacgagcagaaagattaggacctaacagttgaatttattcccttctgtatagctaatatacaaataacataaccttgtttaagcatgttacattaactactgaaattaccacagatcgcaagaagattgtcccatgcaggagaacgtcaaagcgcctacaggagaagcggaaagctcatgatgtttcagaggtaagttaactaacaaaagaactcgacctactgttcttcatgaagtaataaatatctcatcgaaccttttcaggagagttacactgaagcttcgtcttgcatgttgtcgacttcttcttcatcaggtaataactaatcattttatgatcgataaatgtatcacctactttataatttaatatgattttgtggtcaagagattattgcaatcttgcattgtgcacaattaattaatatcaccgtacaaatatgtaaaatacctaggaaatattttgttttttactcctacctgttatacatggaagtgcgaagcatcaatgatccagagtcacatctaaacacattcaatattgttgatcacctttattcaatgcatttgttgttgcttgcatctataatatcgcatgaattgacaaccattccttctgtgcttcttaatgatttgtgtggaacctcagaatgcttgtcgtaaagttgatattacgtcgtgcatgtttcgctaatgacttgtgtctttcagatgatgaattattgcacaattctataaaacctggcagacgtaattcgggtggacctagttgttcgatctgtaaggtttgtcagcagttctgatttattaattttctacccccccccaatctttacatgaaatcctaactgattttttttgcagattggaattgcctgctctttcctcatcaaatgcaagaattccacttgttctcgtagcttccacaccttttgtcttgatcctcctttgcaagagattataggcacctgggaatgttcttggtgcaaaagcaatgcagcaccagcagtcaaggtgacagaagtgttaacatcaaaaaaaatccaaagacttgttggccacagacgaattcttcaggaggcagatttccagtatcaattcctcgtgaaatggcaatctctttctcatcatcatgactgctgggtatgttaaccttcttgctcaatctatatttggtgtctttttgaatgacttatctttgctgtctttttttttctttttctgtaaggcaataggtgtttgacttttcctttttctgtaaggcatacttgctagggaacctccctctaccaacacctttcttgtttgtagcagtacattatattgagtttctttgaactggtaccttgcattgtatatttcatttctttcaagtcatgaaactttgtattagcccttgctgctacaactaaaaaaatgtcatgctgcagctgctacactttgatttctattttaatgcaaacatacacatatttggcgtattcacaaaaaaaaaaacggcatcttcctaatgtttgtttatgatgttagaattgtatcctgccacactttgcctaatatttattatgtaattgctatacttgatgtggaccatgcaaatattgttccctagacacttaattatctactctctgtaggttccgcttgaatggcttcatgtatctgatcctttacgagtacagagctatctaaacaagaactggtaaatcttctcagtttcatgtttttctgtctaccgcctccagtgtaaagtttcttgtgttattttcttgttacatgtatttatcttttataattttttttgtgttcgtcaatgttgctaaattttttcttggatatactagttgcacataatctcgtacctgagtaatcgttgttcatatcattagcaaattaataatatgagcccctactaattttctaccttttttttcattaatcattactgagctattctggttgaacaccatgttgatgtttgccatttttaaaacaatcttgtttgtttataatcttaccagctgtgttctctagtgcaccatagtgcttatttttgttcttgtttgtgaacattgcaacagcttgcctaaggaagtttattcagaggatcaaaggaagcttgagtggtttgaagtagatcatgccattgcatgtcggaggaagttccatcatgaaggtttatgtgatgtcttggctactttccaggataaccaagatttcgacgggtatgagttccttgtgaaatggaagggccttgattactgtgaagctacatgggagccatgttgtaccgatggtgtgcaacaggctgtttctatgcttgtcaggaggcataaaaatgcttcaaaaagagttaacatcagccaaacatgtctagatggatcaaaaatagaagaggtgcactgtggtgctctatatgactatcaacttcaaggtttacaatggttaatagataacttcaaaactaggagaagcgttattcttgctggtatgtacataaactctaaatacataatccatgatgcacttgtacagttgtaccttaccaaattataatgcaccaataatacacatgtaaagaattatgctgatcagtttttattttgttgttttgagataatctgatttatcatgatgcttgtgaactgtataattatgtagcgtctctttgatgttttctttatttgtttggcattgtcttgatggaaaaatagcttgtacaactcttatttcatgacaaaactatgataatggggtatgttctgctctattggcagatgaaatgggtcttgggaaaaccgttcaagttgtttgctttctgtaccacattattaaggaaagtttgactgcatccccagcattgatccttgctccaaagagcatcctcctgcaatgggaaaaggtttgtatatagttatgtgatattctgccatattatactgtatattatataaatgaatttaaaattttaccctgaatcctttttttgatattgcatttcagtttacatcaaatatgttgcattaatcctattttttggatgcatgttttgtgctctaggaattttgccagtgggctagtgatcttaatgttattgtttatcaaggagacagagactctcgaaagtgtatccaagtccatgaaatgtactcttctgatgggaaacctttatttgatgctctagtgacgagttatgagtttgtccaaattgacaaggcagttctacagaaattcaagtggtctacaattgtcagtaagttttttcttagatgaagtcccccattatttggtgttcacttgccggcattagtgtattgtctctgttcttttcttgtaacacttgagcatttccccactttcacttcagttgacgaggctcacagaatgaagaagcttgactgcaaccttgcagcttgcctaaaacgatactgctctgaatttcggttgctccttacggtatgtactgcctacttgacctgtaatttcttgtccttaattatttcttggaattttagaattggtttgttccttgtcactagtttgattattagtagtcatctgggcatgaggttttgaaagtgagatgcctggtatagccagcattcaaccatagtgagtgcccataatactttaaaaggggtgtgcattactgtagctgaggcatggctcgctcctactgctccatgcatcgtatgatttggggactaggattttaaatccattatctgaaaatggttcgcttctgtggtctttctgaagcaacttaatcctgtgctagagcctaatcaagtgctatatagccgctagagcctatataacatagagagatctggttagccctttttacagatatcatatatagccgattctttctccttggctgtcagcgtagtaattcttacgaagtgctttacaattgccctttctttaaaagaactatgttctgatcctggttcctcttcctttcactgtacagggaacaccgttacaaaataacatcatggaactgttttctttgcttcattatattgatccggatgagttctctgatccaaaggctgatggattgttctcaccaattgaatctggaagggatttgacaatggatgaaaaagttgctaggattcacaatattttaaagcccaggtgaatactctgaaataagtactatatatgtttaatatcttggacacggatatttttttgccgggttggccggaaggtttggtcgaccaatttcattattaaagaagggtattaaaaacaattgaacacggatcttaagtttcttgtttttgctaggatgttgcggagaatgaaatctgatgttctaacagattctatgccagtaaagaagtgggttgaagttccatgtgcacttgcagattcccagagagaactttacattaatattttagagaggaattactcaaagcttaacagtgccattcggaatggtgagttaagcgttctgctcttttttcatgctctggtaaaattttaagtcagattcactttgtaaaagcatatttgtccctatgaattacgtatgggaatatgaggtttttcaaatccctttaattacgtatggaaataacactgttagtcttgtttgtacttttgcaggcagaaaactttctctgaacaacatacttatggaactcagaaaatgctgcaatcatccagtaggttttactttctgttttgttgatcagatgcagaacttggtctcttttctcttagatgtaggaattgggtgtttttgcttttccgagtctctcattttgacagtgatttgtgtgcagtggttacagaaaatttgtagcaaacgagaagcttaaaattggctttaatgtatcagtttgttaaactccattcttacaatcctgccttctatacaaggaccactagaccaggccttgctccctccgatcacccacaagctcacaacaaagagccctttttaagtagatgtgctgtttgttgtgcatgttaaatttttctgctgtcctaagatgctaagattttgcctttcagtatctatttccaggacttgaagttggacagcaagcaactgaagatgtgtttttatcacttattgcttcatcaggcaaacttcaacttcttcataaggttctttcgagacttcatattggaccttatattgctatcatatcttagcactgcacctgaagtttaaactgctagaaataacactgctcaattgctaaattgcagttgctcccaagattgaaagaaaggggaaatcgtgtactgattttctcgcagatgaccaggatgcttgacattcttgaggattttctttgttccctgggatacaaatatgcacggtatgcttcattcgtctaccttctatcaattctctaaattatatgcttcagactttcgctgctcttttccttgtatatctagtaattgaatgacacttcttttggccatttcatggctgtgttaacacttggcagcatcgatgggcagacatcactctctgctaggcaggagagcatagaagagtacaaaaacattgatagtgaaacatttattttcttgatgtcaactcgtgctggtggcatgggagttgacctggtaatgtattatcatatcaacttagttctttcagttgaaactgttagcctgtagggcaagctcttaaccagcaactgcaatagtatgattatgcctctggactgacaaacatcattataatttgcagcctggtgcagatagggtaattatatacggtaagtggttttaaatgttttcattcactgctaattatataatttgcaagtggatacttgcactgatttggccttcctatttccagatcctgacttcaatccatttatggacttgcaagcacaatctcgggctcatcggatcgggcagacaagaccagtggttgtttaccaactcattacaaagtgttctgtcgaggaaaagatactgcagaagtcaaagcagaagttggccatcgaaaatatgttgatgaactcttccaagaagccaagtgctgatgagttgcagtctatattactccatggagcaaagacaattgtggacaggaagatcagtgcaacatccatccattatgacaatgaagccattgagaatctcctcaagttagacccttccactggtgagaaatgctcgtcggatgataacggttatcttggcagcattgtgagctttgctcatggcgtcgaggatgaagcaccttcttccccaaaggttgaggatctgaaagttctcaagcctgctactcccaaggttgatctcggccgtgggaagaggcaaaggaaagtcgtgaactacgctgacgaggttgagaatgaagacagtgatgatatgtatgccccggaaggttcgtcgacttccgaattcagcagttcgtcctccgatgatgaaactgacagcgctctgcagctgcaaatagttacagtaccggacattgatgcagattag</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051531.1 RefSeq:Os01g0881000]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
