Difference between revisions of "Os01g0952600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0952600| Description = Similar to LacZ (Fragment)| Version = NM_001051956.1 GI:115442282 GeneID:4325748| Length = 8103 bp| Definition = Or...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os01g0952600|
 
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Description = Similar to LacZ (Fragment)|
 
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Version = NM_001051956.1 GI:115442282 GeneID:4325748|
 
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Length = 8103 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0952600, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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Please input expression information here.
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AP = Chromosome 1:43749530..43757632|
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CDS = 43749844..43749976,43750076..43750312,43750590..43750739,43751385..43751463,43752096..43752279<br>,43752733..43752798,43753171..43753407,43753499..43753705,43753823..43754126<br>,43754200..43754359,43754454..43754562,43754967..43755102,43755212..43755267<br>,43755344..43755643,43755719..43755841,43756221..43756922,43757071..43757241<br>|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008394:43749530..43757632
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source=RiceChromosome01
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008394:43749530..43757632
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source=RiceChromosome01
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggctgtagcttctgccagtgcactgttttccgccaagaatcttccgcataaaccctgggaggacccgtcattctttaggtggagaaagcgggaggctcatgtgccgttgcgctcacatgacacacctgaaggagccctcaagtattggcatgaacggaggaatgtgaactatcttaattctgactctgctgtttggaatgatgacgcggttcgtggtgccctggaaagtgctgcgttttggtccaagggcttgccatatgtccagactctaagtggatactggaagttccttttggcttcctcgccagaatctgttccagagaaattctatgatgcctacttcaatgattcagattgggaggctttgccagttccctcaaactggcaaatgcatgggtttgaccgtccaatctacacaaatgtcacttatcctttcaccatgaacccgccatttgtgccaaatgataatcctactggctgttataggacggtttttcgcatcccaaaagagtggaaaggtcgaagaatcttgttgcactttgaagctgttgattcagcgttttttgcttgggtaaacggcgttcctgttggatatagccaggacagcaggcttcctgctgagtttgagatcacagatttctgccatccttgtgactcagaaaaggaaaatgttcttgctgttcaagtgatgaggtggagtgacggttcctatcttgaagaccaggaccattggtggctatctggtattcacagggatgttctactagtatcaaagccacagatctttattacagattattttttcaaagcaaccttggatgaaggcttccgtgtagctgatattgaggttgaggtggaaattgactcacaaaagcaggatcgggagcatgtctcaactttgtctattgaagcaacattgtatgacaattatggacctgctgatgttttaacttctgatatgtctgctgctagtgtggccaatttgaagttgaagccagcttcaagaccaaaacactgttatggttttcatggttatgttcttggtggaaaagtagaaaatccaaaactttggtctagtgaacatcccaacttatacactcttgttgttgtccttaaagattccaacgggaagctcattgagtgtgaatcatgccaagtaggaatccgtaatgtcgtcctggcacacaagcagatgcttgtcaatggatgtcctgttgtaataagaggtgtcaacagacatgagcatcatccacgtgttggaaagacaaatttagaagcttgcatgattaaggatctggttttgatgagacaaaacaacattaatgctgttagaaacagccattatccccaacatccaaggtggtatgagctgtgtgacatttttggactttatgtaattgatgaagccaacatcgagacgcatggctttgatgaatctagccatttcaaacatcctacacttgaacccttctgggcaagtgctatgcttgatcgtgttgttggtatggtggagagagacaagaatcatgcatgcattatagtatggtccttgggaaatgaatcttcgtatggaccaaatcactcagccatgtctggctggattcgtggaaaggacccgacaaggcccatccattatgaaggaggtggttctagaacatcctccactgatattgtatgcccaatgtacatgcgtgtctgggatattcttaagatcgcacaagacccttctgaaaataggcccctcattctttgcgaatattcacatgctatgggaaacagtaatggaaatattgatgcatattggatggccatagacaacactgttggactccaaggtggttttatatgggactgggtcgatcagggtttactaaaggaagatgctgatggatctaaaaactgggcatatggtggcgactttggagacactccaaatgacttgaatttttgtcttaatggcattgtatggcctgatcggacaattcacccagctgtgcatgaagttaaatatttataccagcctatcaaaataacaatgatggataacatgcttaagattgaaaacgtacatttttttgagacaacagaagctttggacttcagttggctacttcaaggagatggctgtgctttgggctctggttcacttaatgtcccatccatagcaccacagagtactcatctgatcaatatgaagtcatcaccttggtttactatttggagtacttgtgtcgtaaaagaaatatttttgtccattaacgtgaaattgaggtaccaaacacaatgggccaaagatggccatatcttggcttcagcacaaatttgtttacctccgaaaaaaggctttgtccctcatgcgatagcactgcccaggagctctttggtttcggaacgtgttggtgatcatgtactcatcagcaaaagtaatgcctggcaaatcaaagtaaacagtatttcaggaacaatcgatagttggaaggtcaacaacattgagcttatgagcaagggaatacacccatgcttttggcgaacaccaactgacaacgacaagggaggcttctacaccaagccctatgtttcaagatggagagaagcttctctcgacaacatctcgttctacagcagccagttttctctgaaggaattgccagaccaaaccgtcgagatctccaccatctactacggtcttcctgggaatcaaccaaagcctgatgaaacctctctctcagacgaatccgagtccgtcctcttccgggtgcagatgcgcggccggatctacgactccggcgacgtgatcctggactacgaggtgagccccaagaacgacctgcctcctcttcctcgcgtcggcgtcgtgttcaacgccgacaagtccctgagccgtgcaaaatggtacgggagggggccattcgagtgctacccggaccggaaggccgccgcgcacgtcggcgtgtacgagagcggcgtcgacgagctgcacgtgccgtacattgtccccggcgagtgcggcggccgggctgacgtccggtgggtggcgctccaggacgccgacgggttcggcctcttcgcgtcggcctacggcgagtcgccgccgatgcaggtgagcgccagctactatggcgccgcggagctcgaccgcgcgacgcataaccacaagctcgtcaagggagacgacatcgaggtgcatcttgatcacaagcacatggggctgggaggggacgacagctggtcgccgtgcgtgcacgagcagtacttgctgccgccggcgagatacgccttctcggtgaggctgtgcccgttgctgccgtcgtcgtcgtgccatgacatctaccactctcagctaccctgttga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MAVASASALFSAKNLPHKPWEDPSFFRWRKREAHVPLRSHDTPE                    GALKYWHERRNVNYLNSDSAVWNDDAVRGALESAAFWSKGLPYVQTLSGYWKFLLASS                    PESVPEKFYDAYFNDSDWEALPVPSNWQMHGFDRPIYTNVTYPFTMNPPFVPNDNPTG                    CYRTVFRIPKEWKGRRILLHFEAVDSAFFAWVNGVPVGYSQDSRLPAEFEITDFCHPC                    DSEKENVLAVQVMRWSDGSYLEDQDHWWLSGIHRDVLLVSKPQIFITDYFFKATLDEG                    FRVADIEVEVEIDSQKQDREHVSTLSIEATLYDNYGPADVLTSDMSAASVANLKLKPA                    SRPKHCYGFHGYVLGGKVENPKLWSSEHPNLYTLVVVLKDSNGKLIECESCQVGIRNV                    VLAHKQMLVNGCPVVIRGVNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYP                    QHPRWYELCDIFGLYVIDEANIETHGFDESSHFKHPTLEPFWASAMLDRVVGMVERDK                    NHACIIVWSLGNESSYGPNHSAMSGWIRGKDPTRPIHYEGGGSRTSSTDIVCPMYMRV                    WDILKIAQDPSENRPLILCEYSHAMGNSNGNIDAYWMAIDNTVGLQGGFIWDWVDQGL                    LKEDADGSKNWAYGGDFGDTPNDLNFCLNGIVWPDRTIHPAVHEVKYLYQPIKITMMD                    NMLKIENVHFFETTEALDFSWLLQGDGCALGSGSLNVPSIAPQSTHLINMKSSPWFTI                    WSTCVVKEIFLSINVKLRYQTQWAKDGHILASAQICLPPKKGFVPHAIALPRSSLVSE                    RVGDHVLISKSNAWQIKVNSISGTIDSWKVNNIELMSKGIHPCFWRTPTDNDKGGFYT                    KPYVSRWREASLDNISFYSSQFSLKELPDQTVEISTIYYGLPGNQPKPDETSLSDESE                    SVLFRVQMRGRIYDSGDVILDYEVSPKNDLPPLPRVGVVFNADKSLSRAKWYGRGPFE                    CYPDRKAAAHVGVYESGVDELHVPYIVPGECGGRADVRWVALQDADGFGLFASAYGES                    PPMQVSASYYGAAELDRATHNHKLVKGDDIEVHLDHKHMGLGGDDSWSPCVHEQYLLP                    PARYAFSVRLCPLLPSSSCHDIYHSQLPC</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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DNA = <dnaseqindica>315..447#547..783#1061..1210#1856..1934#2567..2750#3204..3269#3642..3878#3970..4176#4294..4597#4671..4830#4925..5033#5438..5573#5683..5738#5815..6114#6190..6312#6692..7393#7542..7712#ggcagcaacagatcgctcgcctccccgtctcctcgcccgccgccttcgccgatctccatccggcgagcatccctcccgccgccgtcctgctgctgcttccgccgccggtgagcacacgcacatcctctttctcatctcttcgccttaaccttagtactagaaacaaacaacagtctgttttcacctgaaaatagtttagggcgagtgaggtgaggtgttcttcttatcgagtttcatctccatgttgctgcaggaggggagggatatgtgcctgtgaaaaatcggaggaaagggggtataaatctttgaccataatggctgtagcttctgccagtgcactgttttccgccaagaatcttccgcataaaccctgggaggacccgtcattctttaggtggagaaagcgggaggctcatgtgccgttgcgctcacatgacacacctgaaggtagagattgcagcactgaacccagaaccactatgtaggtagatagaagatttggttgtacagtgattttcggattgatttgttttctcttgtcaataggagccctcaagtattggcatgaacggaggaatgtgaactatcttaattctgactctgctgtttggaatgatgacgcggttcgtggtgccctggaaagtgctgcgttttggtccaagggcttgccatatgtccagactctaagtggatactggaagttccttttggcttcctcgccagaatctgttccagagaaattctatgatgcctacttcaatgattcagattgggaggctttgccaggcatgcatgctactacatcattacttgcttttattagatgcctttagttgatattgttctcattttttagtcagtagtgttcagtgtttgcttatatagcatcagctattatttcagtctcactgtaaagcttctagcttctagtgttttatacacttgaaacaagacattttactgtcatttagtcaaaatgttccatgacaaatattctagaatttcctcttattgttcatatcgtttgaagtttatactcaaacgaacatgtgcttggttgcagttccctcaaactggcaaatgcatgggtttgaccgtccaatctacacaaatgtcacttatcctttcaccatgaacccgccatttgtgccaaatgataatcctactggctgttataggacggtttttcgcatcccaaaagagtggaaaggtatgatatgtacttatcattcgttttcttattcttctgttcttatgcacagcaagtcataaaggggccagtgaccatgttttaaagtccaaaatggattcccctttctgctatggttttccttgttgcattgcagctagcaaaaacatccttatctaagaagaataatacaaaatatgattgatatgctcaagaaagttagatttctttgtgccctgctgatggtaacgtcagggttcattaaattgaagttttgttagtgacaagtgccaacaacatcaagagaggattttaactatagttgcttcatcagcttaaaaataaaatgttaatagtgactaccctgtcgtcaagttccctatccaggacttaccaaatcctactgtgcatttgttgaagaatttattggtggtatagttattgattatcgccttggactctctcacatatttgattttctgacagagtatatgttgtgtgtatggtgcagtgtttgatgcttcttatgacatgctctaaacttttctcgtatgcatgcatagtgtcttttttttctctaataatcacagtaatgcagctggcatttgactgttgtcccctaatgttcctgttctatattaaacagttctgggttgattgtgataggtcgaagaatcttgttgcactttgaagctgttgattcagcgttttttgcttgggtaaacggcgttcctgttggatataggtatggcacaaacaatgcattgcattgatttattacttgtattttctcaatttctgaaaaatgttccagtgatctatcaagttagtaccatttataaaagaaaactacttcccttttcacgtgtttactgctaattggttttatcaagtctgttatcttcttcgattatatgattatcagactcaacatttgcttgtgctcactaaaagtttccttagatagcagaatggaatgcatgaatagttttggcagcacaaactacatggaataggatccataattttggtacatataggcctcttcaaatttttcatttatcatctttggaaattggaatcaccaaaatatacttattttcaagaatcctggatttcccctaaatcttctacttgtgtcttcctgttatcagaaatgacactctgttcttctgactatggtttagttggactatttagtagctcgattgtattgattttgtattttatgatggactatggactgctattctactgaatattacaaaattaaaggtgtttagacttcttgagggatgatgattttactaacatggtcatgtagaaaatagactgttcatctagagaataaacagtttgcttgatgtgttaatgcagccaggacagcaggcttcctgctgagtttgagatcacagatttctgccatccttgtgactcagaaaaggaaaatgttcttgctgttcaagtgatgaggtggagtgacggttcctatcttgaagaccaggaccattggtggctatctggtattcacagggatgttctactagtatcaaagccacaggttacttctctagttttgctcatgcaatattgaacgaattctttcccttttgcaatgaagtgaatggttagctgagcttatgacattttcttcgtctcagggttttagtactttaatataataacaactacataaccatgaatccactgtcatgtgctcactctaacaagaaaacacggtatacacagttacagtgaaaaaaaggggtgtcttaacttgttgaacttgattagacctgaatactcatggaagcaaatatttaagtcagaaaaagattgttattccactggcattggttgacaataggtcatattattaacatgttctttttgtcaaactcctgacatgcacactgcaacatcatttgtgattttctacatctgttttacttcttgaagagattccttatcatccatggaaatgctagttaacaagctaaaattttgtttacagatctttattacagattattttttcaaagcaaccttggatgaaggcttccgtgtagctgatattgaggtaattgtgctagctatgcgtgcagggttgtgcacttctgcagcatgatagtgcaaatacaggaatagtgtacaaggttgcaaaccttttttttgcttgccgtttcctatccattcttttgggtcagaatattaatgtaagcttcaagattatttattataataatgttattaattattaatagcaaactgcctatttcaatagtccagatggtatagtgctgactgatgcacgagtccagtaaacactcaatctcattgttctgtatttgtattcagttactgtacttctgaatcagcattcccaaaacaaaagtaagatagggttggcaattccactacttcaaaaggtttgtgccgttccatatgccaggttgaggtggaaattgactcacaaaagcaggatcgggagcatgtctcaactttgtctattgaagcaacattgtatgacaattatggacctgctgatgttttaacttctgatatgtctgctgctagtgtggccaatttgaagttgaagccagcttcaagaccaaaacactgttatggttttcatggttatgttcttggtggaaaagtagaaaatccaaaactttggtctagtgaacatgtaagagatctaatacaagggaaatatcattaatttttatttcaatcgtactgtttgaaactgtcttataactatattttctttccaacagcccaacttatacactcttgttgttgtccttaaagattccaacgggaagctcattgagtgtgaatcatgccaagtaggaatccgtaatgtcgtcctggcacacaagcagatgcttgtcaatggatgtcctgttgtaataagaggtgtcaacagacatgagcatcatccacgtgttggaaagacaaatttagaagcttgcatgattaaggtagctctcttctgtcaactgtcatatctgaagacatttcgtattactatctctttggctcgtttttttttctcccaggctgttttcaggtattaactatttatttatttgtgacaggatctggttttgatgagacaaaacaacattaatgctgttagaaacagccattatccccaacatccaaggtggtatgagctgtgtgacatttttggactttatgtaattgatgaagccaacatcgagacgcatggctttgatgaatctagccatttcaaacatcctacacttgaacccttctgggcaagtgctatgcttgatcgtgttgttggtatggtggagagagacaagaatcatgcatgcattatagtatggtccttgggaaatgaatcttcgtatggaccaaatcactcagccatgtctggtaaaatattcttcactgtgatagttcagttaatgatattttttgacgcatctaagagatcacattcttgtaggctggattcgtggaaaggacccgacaaggcccatccattatgaaggaggtggttctagaacatcctccactgatattgtatgcccaatgtacatgcgtgtctgggatattcttaagatcgcacaagacccttctgaaaataggcccctcattctttgcgagtatgttcaatgcagcctcacatgttaacttgttccccttttttgtattaaaattccagaaatgttaaagaaaattttccattttgttttcaagatattcacatgctatgggaaacagtaatggaaatattgatgcatattggatggccatagacaacactgttggactccaaggtggttttatatgggactgggtcgatcaggttacaaacaattttcacttcttaagccccttttatttgcattttagcatgccatcccctggaatttctgtttgcatgtttattgtttaagactgcaagggatccatatgcgaggtttcctaggtggagcggtaaatcaagttatggccaggttctttgattctttgtttattcgataaaatagatacatggccgtaaaagttaactttctttgtcttctgctacatagaggttgcatttgcataagacttttatcatagcataagtcaatgtcaaggctgtcaagctaatatagaacaatggtacacaaaagtgaagtgccaaaaaaattgaccgttgacttctacctgtttataaatgctgtaagctactttcacaatattattctccaatgttcatttcagggtttactaaaggaagatgctgatggatctaaaaactgggcatatggtggcgactttggagacactccaaatgacttgaatttttgtcttaatggcattgtatggcctgatcggacaattcacccagctgtgcatggtaactcgaaatacaatgtttattttgttaatatatgttgtgaacataagatccctatttcctatttctagatgtgatactaattactgaattgactctggttttgcagaagttaaatatttataccagcctatcaaaataacaatgatggataacatgcttaaggtaactctggttgccatttattgagctgttttcttgcatacgtagttgatctaaatgatttattattatcatgcagattgaaaacgtacatttttttgagacaacagaagctttggacttcagttggctacttcaaggagatggctgtgctttgggctctggttcacttaatgtcccatccatagcaccacagagtactcatctgatcaatatgaagtcatcaccttggtttactatttggagtacttgtgtcgtaaaagaaatatttttgtccattaacgtgaaattgaggtaccaaacacaatgggccaaagatggccatatcttggcttcagcacaaatttgtttacctccgaaaaaaggctttgtccctcatgtacgttcttcaacctcattttggttgctacttcttctgaattgtcttattcttccagctaactaccattttcaggcgatagcactgcccaggagctctttggtttcggaacgtgttggtgatcatgtactcatcagcaaaagtaatgcctggcaaatcaaagtaaacagtatttcaggaacaatcgatagttggaaggtgagactaaaatggatgggtttcctttgctttattgttctgtttgcatatttgtttgatcatctttgatctaggaagtaatacctttttgatctaagcaatttttctttgcaatctaacgaactgttttcccttttatggtttggtttaatccgcaatagctacatttgtctgaactccaaaattgttgatgtactagttttctgtttgaactgaaagtaactgcagacgagctttcccatcggcagtttctgcggagtcttgttactctgtcaaacttagccaagttttgaaatttgctccagactgtttatatacactgtcagttttaatttccttatcaaaatctggaactcattatacttcctctgaaccgtaggtcaacaacattgagcttatgagcaagggaatacacccatgcttttggcgaacaccaactgacaacgacaagggaggcttctacaccaagccctatgtttcaagatggagagaagcttctctcgacaacatctcgttctacagcagccagttttctctgaaggaattgccagaccaaaccgtcgagatctccaccatctactacggtcttcctgggaatcaaccaaagcctgatgaaacctctctctcagacgaatccgagtccgtcctcttccgggtgcagatgcgcggccggatctacgactccggcgacgtgatcctggactacgaggtgagccccaagaacgacctgcctcctcttcctcgcgtcggcgtcgtgttcaacgccgacaagtccctgagccgtgcaaaatggtacgggagggggccattcgagtgctacccggaccggaaggccgccgcgcacgtcggcgtgtacgagagcggcgtcgacgagctgcacgtgccgtacattgtccccggcgagtgcggcggccgggctgacgtccggtgggtggcgctccaggacgccgacgggttcggcctcttcgcgtcggcctacggcgagtcgccgccgatgcaggtgagcgccagctactatggcgccgcggagctcgaccgcgcgacgcataaccacaagctcgtcaagggagacgacatcgaggtgggttcgcatttgcactgtgtttagataaacaaaagctttattgaactcaacgaattacattaagatgatgatagaattgtaccgataacaacttttgattgtgatttggcgatgatttcagagagaaattgggtttgtgttgcaggtgcatcttgatcacaagcacatggggctgggaggggacgacagctggtcgccgtgcgtgcacgagcagtacttgctgccgccggcgagatacgccttctcggtgaggctgtgcccgttgctgccgtcgtcgtcgtgccatgacatctaccactctcagctaccctgttgatccgtctgagatgggcaagtgaggcaataaagcagagacgtatatatgctcctgtaaactaccggctgcaatgaccaggttgtttgtcgactgtgaaataagcgagcgagcttgatgctattcctcaatcttgactacagtgtcaatttctcctataaatggcaatggggacccatgaccctgatacccgatgggtttttactctattagaagctaattatgttctaactcttatacttatgggtctattgataggcgaaaattcttacccattgggtacgtgggtatggttatattctttacccacccatacccacaaacctgtgggtgaaaaatcccgtagattgagcctaaaactatgaataagataaatctcaactactattaaatc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051956.1 RefSeq:Os01g0952600]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 05:08, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

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Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information