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Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]] |
| − | GeneName = Os02g0133400|
| |
| − | Description = SMC protein, N-terminal domain containing protein|
| |
| − | Version = NM_001185859.1 GI:297720850 GeneID:9269307|
| |
| − | Length = 13250 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os02g0133400, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
| |
| − | AP = Chromosome 2:1766071..1779320|
| |
| − | CDS = 1766071..1766261,1766368..1766569,1766719..1766814,1767414..1767560,1767635..1767800<br>,1767907..1767973,1768963..1769290,1770152..1770168,1770235..1770352<br>,1770565..1770797,1772850..1772949,1773029..1773099,1773199..1773382<br>,1773784..1773929,1774484..1774663,1774737..1774824,1775634..1775838<br>,1775945..1776081,1776529..1776612,1776718..1776894,1777050..1777194<br>,1777642..1777763,1777846..1778091,1778571..1778789,1779016..1779094<br>,1779178..1779257,1779291..1779320|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008395:1766071..1779320
| |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008395:1766071..1779320
| |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgtatggcatgttattcatgctcctgattgtcgagaaaaaggtggtacgcttgcgcaggacagtagcttcaaagaaggatgaatactacttggatgggaagcatatcagtaaaactgaagtcatgaatctgttagagaatgctggattttctcgctcaaatccatattacgttgtccagcagggaaaggggacctcttgtaagtggacattgattcatgatttattagcagccaacaaaagaaagcagattgatcaagttgtccactacttggaggaaaggttgagagaacttgatgaagagaaagaagaaatgaagaagtaccagcagctggacaaacaaagaagatcacttgagtataccatactggaccatgaactaaatgatactaggaacgaattagctttgatggatgataaccgaagaaaaatttctgaaagaatgtcccatgcggataatgaagtggtagatgtacgtgagaagatcaggagttttgagaaagaaataaaattctcaaccaaggggataaatgagaacaaggctcaaaaggaagatgtagagaagaagtgtacagaggtgcttaaggtagttgctcaaattgagcttgatttgagagatataaaagatagaattttgaatgaaaaattggcaaaggatgaagctgcgagggattcacaaagtgtgaggatggagagtgaaaggtcaaagtctgaattagctgagactagtaaggtgcatcaaaccaaactgagggaagaggaagaaatatcaaaaagcataatggaccgtcagaagcagttaagtatattgtaccaaaagcaggggagggcaacccaatttgcaaacaaagctgccagagataagtggcttcaaaaggaaattgatgatcttgagtgtgtgcttttatcaaaccgaaagcagggaggtttactccaagaagaaatccagaagcttaaagacaaaattaataacttgaatagctattttgagttctacgaaagtgaatcaaacaaattagagtccgcacttgcaaagaagcacagtgattacaatgacttgaggaagcagagagacaagcttcaagaagaaaggaattacgaagctaatgtgacagctgaaaaagataggctcaaggaaaatcttgtgaatgcaaaggagaagctgggcaatgcaacacctggggatatcataagaggcttaaattgtgttagcagaattaccatggaacatggtattacaggagttgttggtcctatactagagctgattgattgtgatgagaagcttttcactgctgttgaggtcactgcagggaatagcctgttccatgtagttgttgagaatgacgacatatcaacgaaaatcattcaagtattgactcgagaaaaaggcggacgggtgacatttattccactgaatagagtgaaagttccagatgttagttatccacgaagtgacgattttgttccattgttagagagattagaatgtaataaggccaatcatcgccgtgcttttgaacaggtttttggcaggacagtaatatgcaaagacctggaaactgcgaccaaagttgcacgcgataacgggctaaattgcatcacgcttgatggtgatcaagttgccagaaaaggtcatatgacaggaggtttccatgactatagatgctcaaaactgaagtttgtaaaaacaattaagaacaatatgaaggcaattgaggaaaaggaggaacatctaaagaatgttgaaaggaatctaagtgatatcctttctccttgtttacatgacgctgataagaaaatgacagatttagttaccaaacagcagcaaatggatgctgaaagtgatcatgcaaaatcagagttggaacactttaaggttggcattgctagcactatgaagcaaataggatcacttgagaaggcactaggaaagaagatagaaacaaggaaagaagaattgaaagctaatctatcaactaatctcatgaggcgccagaaagagtttgaagcagtaatttcatccgcagattctaaaaccttgtctcttgaagctgaatcaaaagagcaagaattaaatagctctaagagcagtcttgatgatttgactgcgatgctgaaagctaatgtcgatgctatcaataactttacgataaagatagaggaactgaaaagacaaagggataatctgaagacacttgaagctaacctggaccagactgtgcgagatggtgccaaggatttggaacagctcatgagcagcaggagcatgcatttagctaagcaagaagagtgcgggggcacgggaccgcgcccgcccggtgtcgaagaaggcgatccgtgtgaggccgcagcatctgagggcggctgctcaacatccgagtgggatggagcgaccacgggcgtcgaggatggaagcccacctgcaacaacagtaggacaaggcaccgaaaccatatcgtcgtcgaggaggaagtctagggaagcggaggagggtgaggcggctaaggtggctgaaaagggaaagacgagtgtagggaatttcatgctgaatggaggaggatgggtgcctattatggaggtagcaggcggtcatgagcccctcggcccaatatgtgggtggcagggaggcatggaggagcatggggcaggagaggcgaagggcagcgatgaggccggctgcatcccaggtgctggtggaggtgttggagccgctggaggacgcctggagtggagcaaaggcggtgtgggcctgcggggaaggcccgaggatgccctggttgcgcccagccggggcaccaggacctccaggggcgccagaacctcccttgcggcgctgtccagggggggtgacgcgctctccaggggccacacgttcgccggtccagggattgaagccccagggaatgcgtttgttggtgccggggctgccggagttgttggagaagccgccggaggagtttgggaagggctgttgggcgccctttttgcagctgggatatccacagacggcatattctattgcctaacaccattgcctactgacgcttttgagacgtacagacagaaaaataagaggcagctgcagaagatgctttacgactgcaatgaacagttgcagcagttcagacatgttaagaaaaaacctcttgactgtgtgaacttcacagaacaacgtgaacaactagagagaagaagggctgaacttgatgctggtgatcagaaaatcagggaactcgtgtcaattttagaccaaaggaaggatgaatcaattgaacgtacatttaagggagttgcgaggcacttccgagaagtattttctgaactagtgcaaggtggccatggacatttggttatgatgaagaaaaaagatggtgatgcaggcgacgaggatattgataatgacgaggatgggcctcgtgaaccagattctgaagatagaatggagaagtacattggtgtaaaatttctaagagaggtactcgagtttcaggtttcctttactggccagggtgaaacccaatctatgaaacaattgtctggtgggcagaagacagtggtggcattgacactgatttttgccatccagcgttgtgatccagctccgttctatcttttcgatgagattgatgctgctctggatacacagtacagaactgctgttggcaatatgatccgccgtctttcggacatggctgacactcaatttatagcgacaacattcagaccggaaattgtaaaagttgctgataaaatctatggtgtgacatacaagaacagggtgagctacatcaatgtggtgtcaaaggagcaggctctggatttcattgggcatgaccagacacagaatgctatttga</cdnaseq>|
| |
| − | AA = <aaseq>MYGMLFMLLIVEKKVVRLRRTVASKKDEYYLDGKHISKTEVMNL LENAGFSRSNPYYVVQQGKGTSCKWTLIHDLLAANKRKQIDQVVHYLEERLRELDEEK EEMKKYQQLDKQRRSLEYTILDHELNDTRNELALMDDNRRKISERMSHADNEVVDVRE KIRSFEKEIKFSTKGINENKAQKEDVEKKCTEVLKVVAQIELDLRDIKDRILNEKLAK DEAARDSQSVRMESERSKSELAETSKVHQTKLREEEEISKSIMDRQKQLSILYQKQGR ATQFANKAARDKWLQKEIDDLECVLLSNRKQGGLLQEEIQKLKDKINNLNSYFEFYES ESNKLESALAKKHSDYNDLRKQRDKLQEERNYEANVTAEKDRLKENLVNAKEKLGNAT PGDIIRGLNCVSRITMEHGITGVVGPILELIDCDEKLFTAVEVTAGNSLFHVVVENDD ISTKIIQVLTREKGGRVTFIPLNRVKVPDVSYPRSDDFVPLLERLECNKANHRRAFEQ VFGRTVICKDLETATKVARDNGLNCITLDGDQVARKGHMTGGFHDYRCSKLKFVKTIK NNMKAIEEKEEHLKNVERNLSDILSPCLHDADKKMTDLVTKQQQMDAESDHAKSELEH FKVGIASTMKQIGSLEKALGKKIETRKEELKANLSTNLMRRQKEFEAVISSADSKTLS LEAESKEQELNSSKSSLDDLTAMLKANVDAINNFTIKIEELKRQRDNLKTLEANLDQT VRDGAKDLEQLMSSRSMHLAKQEECGGTGPRPPGVEEGDPCEAAASEGGCSTSEWDGA TTGVEDGSPPATTVGQGTETISSSRRKSREAEEGEAAKVAEKGKTSVGNFMLNGGGWV PIMEVAGGHEPLGPICGWQGGMEEHGAGEAKGSDEAGCIPGAGGGVGAAGGRLEWSKG GVGLRGRPEDALVAPSRGTRTSRGARTSLAALSRGGDALSRGHTFAGPGIEAPGNAFV GAGAAGVVGEAAGGVWEGLLGALFAAGISTDGIFYCLTPLPTDAFETYRQKNKRQLQK MLYDCNEQLQQFRHVKKKPLDCVNFTEQREQLERRRAELDAGDQKIRELVSILDQRKD ESIERTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDAGDEDIDNDEDGPREPDSED RMEKYIGVKFLREVLEFQVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFY LFDEIDAALDTQYRTAVGNMIRRLSDMADTQFIATTFRPEIVKVADKIYGVTYKNRVS YINVVSKEQALDFIGHDQTQNAI</aaseq>|
| |
| − | DNA = <dnaseqindica>13060..13250#12752..12953#12507..12602#11761..11907#11521..11686#11348..11414#10031..10358#9153..9169#8969..9086#8524..8756#6372..6471#6222..6292#5939..6122#5392..5537#4658..4837#4497..4584#3483..3687#3240..3376#2709..2792#2427..2603#2127..2271#1558..1679#1230..1475#532..750#227..305#64..143#1..30#atgtatggcatgttattcatgctcctgattgtgagtgaaagaaaaaaaactactttgctctaggtcgagaaaaaggtggtacgcttgcgcaggacagtagcttcaaagaaggatgaatactacttggatgggaagcatatcaggtatttcataaacccctaaacaggccaaccatgttacagcagtgttgcttgcttgtacccccttttaattctatgttgttcagtaaaactgaagtcatgaatctgttagagaatgctggattttctcgctcaaatccatattacgttgtccagcagggaaaggtaatattttttcacctgattgttgccatgtgctgttcagctataatgtaatgaaaattgttatgagtagattgcagcccttaccctaatgaaagattctgaacgactggaactcctgaaagagatcggtggtacgcgcgtttatgaagatagacggcgacagagtttgaaaatcatgcaggaaacaggcatgtttaagttatcataaatgtttatatatttgtaggggacctcttgtaagtggacattgattcatgatttattagcagccaacaaaagaaagcagattgatcaagttgtccactacttggaggaaaggttgagagaacttgatgaagagaaagaagaaatgaagaagtaccagcagctggacaaacaaagaagatcacttgagtataccatactggaccatgaactaaatgatactaggaacgaattagctttggtaagattctaccatttttgttgtgtacgtttagtttcaagatgcatttttcctgccatgcaagttggaatattcaaactaaaagaaatgaatgaccattgcaacaagtttggcaaacaaacctttaaaatttagcatttcctactcactgtgatgtcatatttttttggttgtgatggaagaaacttttgaattaaggcgttccctcaatgcatcaaccatatttgcattatacaaactgcgatgtgatatgtaaaattcactcttaaaaaaaccaaagaaaacacagtatttatggcttcatcagtaaccacccactataccactaaccctactgctctggatccgggcagcagttaaaaaaaaatgtttgtttcttcattggttggtgaaaacgagagtgacaagagttcatttttaatcattatagccaatggatcaattgttttactgcctgctttgattcctcttgttgttagatggatgataaccgaagaaaaatttctgaaagaatgtcccatgcggataatgaagtggtagatgtacgtgagaagatcaggagttttgagaaagaaataaaattctcaaccaaggggataaatgagaacaaggctcaaaaggaagatgtagagaagaagtgtacagaggtgcttaaggtagttgctcaaattgagcttgatttgagagatataaaagatagaattttgaatgaaaaattggcaaaggtatgccatagttcatatttgatatttctcatgattttttttgtttttttctttgctacacttaaaaaaaatctatttctaggatgaagctgcgagggattcacaaagtgtgaggatggagagtgaaaggtcaaagtctgaattagctgagactagtaaggtgcatcaaaccaaactgagggaagaggaagaaatatcaaaaaggtaaaaaatatgttgatgtataatctgggagtggattctaaactctcgagaggacatcccctcattgtttgcatgttatccaaattgttatgaaaatatttgaaaaaatttatcaagatagatattaatgtgatagatcactccacaaacatgcaagttaaaattcaacttctacaagttgcaacaaaaaaaaactatggcctgttaatgtatattcacagtcaattttttttgttgcaacttttagaagttaaatttgacattgcatgtttgtggagtgatttatcacatactaatctatctttttcatttttttcaattttttcataaccatttagaggacatgcaaacaatgaggggatgtcccctcgagagtttagaataatttccatgtataatcttttctttatgatagctcgttttgacacttgcactttgtggggatagcataatggaccgtcagaagcagttaagtatattgtaccaaaagcaggggagggcaacccaatttgcaaacaaagctgccagagataagtggcttcaaaaggaaattgatgatcttgagtgtgtgcttttatcaaaccgaaagcaggttatgttgtattatattttagcttggttaatacattatgtattatgttaagctgtattttttgctctcaacttgaccagtcatgtgattttttaatcacccttctgctgtttgatgaatttatatccaacttacctgccttgcaactactccagggaggtttactccaagaagaaatccagaagcttaaagacaaaattaataacttgaatagctattttgagttctacgaaagtgaatcaaacaaattagagtccgcacttgcaaagaagcacagtgattacaatgacttgaggaagcagagagacaagcttcaagaagaaaggaattacgtatatttcttaacagtcatggccttttgatttaatggaagatctattactttatacattacatactctgataatgaaaaatgtcctagatcgttttggatggaggaagctaatgtgacagctgaaaaagataggctcaaggaaaatcttgtgaatgcaaaggagaagctgggcaatgcaacacctggggtatggaaatgctacatttttttcacacctttttgttcatattactgactgctatgggtatattttctttgtaagtaattctacattataaaaaaagaagatattatcgttctattctaatagaagaatagtggtcaaagttgcacgccgaagaccaaataaagtgaacagtgtcatatatttaaatatagtggcagtatcaacaaacttacataatcattaaaaaatgatactactagtttgatttttatttttgattgataatttgacaaatgtttgctttgtttattgttaaatatttcttctgcttggtatgattgttcttgaaaggatatagtagccctataaacatcgagttttgccaactattgccatattatattatttttctgtcaggaaaatgcttgaaactttatttgcatgttgtgattttttttccttcctcaggatatcataagaggcttaaattgtgttagcagaattaccatggaacatggtattacaggagttgttggtcctatactagagctgattgattgtgatgagaagcttttcactgctgttgaggtcactgcagggaataggtcttgaattaaattgctatttaatacatctgacatgatccagatttttttttaactatttcactgtttctttagtaaatgatgtattctattctgttgtgagtagcctgttccatgtagttgttgagaatgacgacatatcaacgaaaatcattcaagtattgactcgagaaaaaggcggacgggtgacatttattccactgaatagagtgaaagttccagatgttagttatccacgaagtgacgattttgttccattgttagagagattagaatgtaataaggccaatcatcgccgtgcttttgaacaggtattaatccatgggccacatcttttgccctataacgtatatgacaatgtcaaaatttaaattttaaaaattaattttggagttgattttgagtttttttatcgtaatttctttttcaacattgacatttaattcgttaagaacacataggtaaaagttttaactataaattatttttttgtcgctaatacgccgattgacgtattatccgtaattggccaaccgatggtagcccacatttttctgtcatgctctttcaattgacatctacatattttattggctaccttggtaaatttaattgatgttttcgttctatcatgcccttcatctgcactgtcttactcatgcttcagttctgcatgtatacatcttgccttttgtctgcttggaggtttacacccagcaacatcagcttgggttcagtagccatggcagaccatcaaataatgtattattttttggcactgtgttgtattaagtctatgaatcatactaaccagactagagcataccctgtatttttagctgagactaatcttagagtaacgggttcttaggtgggtcataaattcatgattatgaacatctataacttatgtattgacatgcatcgcctatcctttccttcccatgctttcatacgtgcgtggggtcagagtgtatgtgtgcatggaacatttctttactttgagtgcatctttttagagtggtcgtttcgctgttatatgcttatctgggctagattgcatagcatctcttctgttgtcatatattttactttagtctaagttttgtatttctgttaggtttttggcaggacagtaatatgcaaagacctggaaactgcgaccaaagttgcacgcgataacgggctaaattgcatcacgcttgatggtagtttcaaactttttcacttgtcattagcagcattaattaatggtgtaatattaataagagtcgttatcaggtgatcaagttgccagaaaaggtcatatga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agcggagaatcacgcgtcccgtcctgagatccttaacagaaaaaccatgggcgtcaaattcaaaggaacaactattgtcgcaagtgaattggcgaacggataacaggttgcggactatggatggtgcgacaagaatattattaagagcgaaatttgtggtaggtgtaggaaggatggaatgacctctagacgtaacaggaatactagtgccattacctactgttattgaggagatggaggggggaaggcgttgggtaagcataccatccgaggacgtcatgtgcgtagaggcgccggagtcaacgacccagggcgagttgccatgcagttgcatgttctgcagggcagcgatgaggccggctgcatcccaggtgctggtggaggtgttggagccgctggaggacgcctggagtggagcaaaggcggtgtgggcctgcggggaaggcccgaggatgccctggttgcgcccagccggggcaccaggacctccaggggcgccagaacctcccttgcggcgctgtccagggggggtgacgcgctctccaggggccacacgttcgccggtccagggattgaagccccagggaatgcgtttgttggtgccggggctgccggagttgttggagaagccgccggaggagtttgggaagggctgttgggcgccctttttggtgttagggcgccggccaccctgctgctgcggctgctggaaaccgccattagaggaggcagcagccaggagggcggcggcagcacgcgtcttctcgtcgttttgcagccgcagctccttgaggaggagctgatggcgtgcggtggcgagggtgaggggctgctgtccggcgatgttgtcggcgacgccggagtagacctcgttgagtccgcgcaggaggttgaggacgaggttgggctcagatacgggctgcccgacgtcgcgcagttcgtcggccttctccttcatgcgaatgcagtaggcgtcaatggacaggtccccctgagtcatcgagtgaaactcgtgattcaggaagatggcgcgaggagctttgtttgcctggaacaccccgccgatggccgtccaaagaacgctcgctgtctgcgtgtcgtcggtcatggcaaggttgaggacggcgtcggagacggtgctgtacatccatccgcggacgcagaagtcagcctgtttccaggcctcgtcggtggggcgcgaggtggaggcggtggcgagatgatgcagcagcccgaacttcccacacgtggcctggaacgctgttgaccacttggtgaagttggagggcttcaactcgagggtcatggggacgtggagcttgatgttgatggtggcgaaggggcagatcacaggggcagaatcggccccaagggcgccgctagtggcagagaggaggtccgattgggttcccatggggagggagggaggaagggggcggcgctggaggagaggatctcgaggttagatggggatcgggacccggagctctgataccatgtagagaattggattagggggcaattggccacacctcaatgggagggggcgccttctgttatatagggccggctggcctgctgtacaaggcaaggataattcccttgatttacatctgctatctatagtagctaatccctgatttacatctgctatctatagcagctgggatatccacagacggcatattctattgcctaacaccattgcctactgacgcttttgagacgtattgcatttttcatggctacctagttttgtttccatataaatgagtgaactggctgaacagtccagaatgcataccaatcctatttgtatggccaatgctacaggtacagacagaaaaataagaggcagctgcagaagatgctttacgactgcaatgaacagttgcagcagttcagacatgttaagaaaaaacctcttgactgtgtgaacttcacagaacaacgtgaacaactagagagaagaagggctgaacttgatgctggtgatcaggtgaaattttcccctggtacagctgccttttgtttcgcttgaatcctaaacactgtatctcataaaaaatgcagaaaatcagggaactcgtgtcaattttagaccaaaggaaggatgaatcaattgaacgtacatttaagggagttgcgaggcacttccgagaagtattttctgaactagtgcaaggtggccatggacatttggttatgatgaagaaaaaagtatattttccttgctttccgactgatcttgcttccatggcatgcacttttaggcttttagccctattacccagtaatgtgcttttagttgtgctaaattcacaattcaccttcactgggtttacttggatttcatctatagcctaccacaattttctggggactaaaagctgatattgttgtcaccttcattggctaacctatgctatctcacctatttccatgaattggcattactccggtcttatattttgttttgaaaatctgggttattcttcaatgcaaagctagcgccaagtttgaatacagtgcaaatcgacacattttagaatttccaactttgggtgtgtttagttcacgccaaaattggaagtttggttgaaattggaacgatgtgacggaaaagttggaagtttatgtgtgtaggaaagttttgatgtgatggaaaagttggaagtttaaagaaaaagtttggaactaaacaagggctttgttttattgcctttgcctggagttctcttaaagttccttccatgcgtgctatttcgaaagtgatatctcttcttgaaagttaatgcttatgcttttctttctggtaggatggtgatgcaggcgacgaggatattgataatgacgaggatgggcctcgtgaaccagattctgaagatagaatggagaagtacattggtgtaaaagtcaaggcatgtcctatttgcatatgcttttttacgtatctgcgcttgtatactattcattcaaccaaaaaaatcaagtgatgttagataatgctggcgagttgttatattccttctgaattatattatgtataaaatatttcctgaagtttctaagagaggtactcgagtttcaggtttcctttactggccagggtgaaacccaatctatgaaacaattgtctggtgggcagaagacagtggtggcattgacactgatttttgccatccagcgttgtgatccagctccgttctatcttttcgatgagattgatgctgctctggatacacagtacagaactgctgttggcagtatcctttgtatttcttccctctatctctctcgtgcccgttacaaaagaatctttgaacattacaagcataattttacatctgttttccttaagctatgtttcagatatgatccgccgtctttcggacatggctgacactcaatttatagcgacaacattcagaccggaaattgtaaaagttgctgataaaatctatggtgtgacatacaagaacagggtgagctacatcaatgtggtgtcaaaggagcaggctctggatttcattgggcatgaccagacacagaatgctatttga</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001185859.1 RefSeq:Os02g0133400]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 2]]
| |
| − | [[Category:Chromosome 2]]
| |
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Annotated Information
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Structured Information
