Difference between revisions of "Os02g0143200"

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(Created page with "{{JaponicaGene| GeneName = Os02g0143200| Description = Armadillo-like helical domain containing protein| Version = NM_001052402.1 GI:115444174 GeneID:4328275| Length = 750...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os02g0143200|
 
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Description = Armadillo-like helical domain containing protein|
 
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Version = NM_001052402.1 GI:115444174 GeneID:4328275|
 
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Length = 7504 bp|
 
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Definition = Oryza sativa Japonica Group Os02g0143200, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
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Please input expression information here.
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AP = Chromosome 2:2397459..2404962|
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CDS = 2397648..2397812,2398367..2398441,2398860..2398975,2399155..2399269,2399360..2399488<br>,2399809..2399856,2400369..2400550,2400628..2400824,2400916..2401202<br>,2401389..2401538,2401633..2402094,2402201..2402350,2402612..2402687<br>,2402851..2402978,2403244..2403435,2403559..2403690,2403767..2403889<br>,2404128..2404346,2404518..2404679|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008395:2397459..2404962
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source=RiceChromosome02
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008395:2397459..2404962
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source=RiceChromosome02
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgggcagcgtggggctgaacgacacggtgtcaggggtggtgtcgaggaaggtgctcccggcgtgcggtggcctctgctacttctgcccgggcctgcgcgcccgatccaggcagcccgtcaagcgctacaagaagatcatcgccgacatcttccccgccactcaggacgaggaaccgaatgagaggaggatcgggaagctgtgtgagtatgttgctagaaaccatcatcgcgtgccaaagattacagcttacttagagcaaaggtgctacaaggagttgagaaatgagcagtatggctttgtgaaagtagttgtgctaatataccgcaaactacttgtctcctgtaaaaagcagatgccattactggcaagtagcgcattgagcatcatatgcactcttttggatcaaacaagacgggatgacatgcggattataggttgtgaaaccttgtttgattttaccgtctctcaggtggacggcacatatcaattcaatttggaagaacttgttccaaaactctgtgaattagctcagatagtaaaggcagaggagaaggataacatgctccgtgcatcaaccttgcaagccctttcagctatgatttggtttatgggcgagttttctcacatatcctccgcgtttgataatgttattcaagtagtgctggaaagctataaccttcaaaagatgcaaaatgacaatatagacagtgaagctccaggcaatcggtgggtggaacaagttcttaaagcagagggcaacgccaccatctctaggataccttcttggaagagcatagttgatgacaagggagagcttcatctacctgcggaagatgccaaggatcctaacttttggtcacgagtctgtgtgcacaacatggccaagctgtccagggaggcaacaacattccgtcgtgttttggagtccctatttcgtcactttgataataataattcatggtcttcccagaacacacttgccttttgtgttcttttggacatgcaaatattaatggaaaaccaagggcaaaacattgacttgatgatatcaatactggttaagcaccttgaacacaagtctgtactgaagcagccagagatgcaactcagtgtcgtggaggttatagcttcccttgcagaacaatcaagagctgaagcatcagccgcaaccataggtgctataagtgatcttattagacatatgaagaagacattgcatgtcgctcttggcagcagagatttggaggtcataaagtggaacgacaaactccggaatgctgttgatgaatgcatactccaactgtcaaagaaggttggtgatgctggacctgttcttgacatgatgtctgtgatgctagagaacatctcccgcactccccttgttgctatagcaaccacatctgccgtttatcgtacagcccagataattacttctatcccgaatttgtcatataggaataaggtatttccagaagcactctttcatcagttactcttagcaatggttcaccctgatcatgaaactcgtgtttctgcacaccgcatattttctgttgtccttgtcccgtcttctgtttctcccttctctaaatcaacatctccaaatcagcttgtgaagcatgatattaagaggactctctcaagagctgtctccgtcttctcgtcttcagctgctttgtttgataaattaaaaagggacaaagagtccttcagagaaaaaccacaggatggaagcatgaacagactttcgcatgctgctgacaatgatacttctacagtcaaggacatgccaagctcgcgaagtcgaaggcacagcttcaaagttcctaatttttctatgaaaagggttgcttcattgtctctgaaatctcccatgtccccaaaggaatgccaaaatacctcggccgaatcatgtagtgaaacggaatcaactttgttgagactaagcagtcgtcaggccacacttttgctgtcatctatttgggctcaagcaatttctcctaaaaatactcctcaaaattatgaagctattgctcatacttacagtttgcttctgttgttctcgggatcaaaggcatcaatctttgaggctcttgctccaagttttcaggtggcgttttccttaatgagttattcactagaaggaacagattcattgctgccatctcgccgtcgatccttgtttactctggctacatctatgattatgttcttttcaagggctttcaatgtggcacctcttatcccgatctgtaaatcaatgctcaatgaaagaacaatggatccattccttcatttagtacaagacaccaaacttcaggctgtgaaggactgctcagaagaaacctatggatcaccagaggatgataataatgcactgaagtctctttcagcagtagaactaactcagagtcaatccagagaatccatggcctctacaatcatgaacaacataagagatttaccagattcagaattacaaactataagaagtcaactgctaagtgacttctcccctgatgacatgtgtccaacaagtgctctcttttttgaattaactgtcagaaatccaggttgtgatgaggattctagcaatcaagaggatgtgctgatcaatatggcaaatgacaatgacacctttggggaagtctacgaaaatacagaagctactacagcatctgtgcccacagcaaatcttctgggtatcgatgagcttctagaatcagttgtcactgatgcaccatctcagactgcaagatgctcggtgtcaacggcccccaacatcccattcaaggagatgactaaccaatgcgaggttctttcgatggagaaacagcaaaagatgtccgtgctcctgagcttcaaacacaaaaaccaatcaaatgtcctgccgatcaatcaagctgacaacacgggagcagtccatatttcctctgacgaccagaatacgaacccttttctccagcaaagccttgatggctaccccaaatatgttgctgatggtgaggcactacaggtagcagctgatgatgtgttccagcagcaattcttgaagctgccagcatcaagcccttacgacaccttcctcaaggccgctggctgttga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MGSVGLNDTVSGVVSRKVLPACGGLCYFCPGLRARSRQPVKRYK                    KIIADIFPATQDEEPNERRIGKLCEYVARNHHRVPKITAYLEQRCYKELRNEQYGFVK                    VVVLIYRKLLVSCKKQMPLLASSALSIICTLLDQTRRDDMRIIGCETLFDFTVSQVDG                    TYQFNLEELVPKLCELAQIVKAEEKDNMLRASTLQALSAMIWFMGEFSHISSAFDNVI                    QVVLESYNLQKMQNDNIDSEAPGNRWVEQVLKAEGNATISRIPSWKSIVDDKGELHLP                    AEDAKDPNFWSRVCVHNMAKLSREATTFRRVLESLFRHFDNNNSWSSQNTLAFCVLLD                    MQILMENQGQNIDLMISILVKHLEHKSVLKQPEMQLSVVEVIASLAEQSRAEASAATI                    GAISDLIRHMKKTLHVALGSRDLEVIKWNDKLRNAVDECILQLSKKVGDAGPVLDMMS                    VMLENISRTPLVAIATTSAVYRTAQIITSIPNLSYRNKVFPEALFHQLLLAMVHPDHE                    TRVSAHRIFSVVLVPSSVSPFSKSTSPNQLVKHDIKRTLSRAVSVFSSSAALFDKLKR                    DKESFREKPQDGSMNRLSHAADNDTSTVKDMPSSRSRRHSFKVPNFSMKRVASLSLKS                    PMSPKECQNTSAESCSETESTLLRLSSRQATLLLSSIWAQAISPKNTPQNYEAIAHTY                    SLLLLFSGSKASIFEALAPSFQVAFSLMSYSLEGTDSLLPSRRRSLFTLATSMIMFFS                    RAFNVAPLIPICKSMLNERTMDPFLHLVQDTKLQAVKDCSEETYGSPEDDNNALKSLS                    AVELTQSQSRESMASTIMNNIRDLPDSELQTIRSQLLSDFSPDDMCPTSALFFELTVR                    NPGCDEDSSNQEDVLINMANDNDTFGEVYENTEATTASVPTANLLGIDELLESVVTDA                    PSQTARCSVSTAPNIPFKEMTNQCEVLSMEKQQKMSVLLSFKHKNQSNVLPINQADNT                    GAVHISSDDQNTNPFLQQSLDGYPKYVADGEALQVAADDVFQQQFLKLPASSPYDTFL                    KAAGC</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]
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DNA = <dnaseqindica>190..354#909..983#1402..1517#1697..1811#1902..2030#2351..2398#2911..3092#3170..3366#3458..3744#3931..4080#4175..4636#4743..4892#5154..5229#5393..5520#5786..5977#6101..6232#6309..6431#6670..6888#7060..7221#gttgtcctcctcctcgccaccttcgcctccaccgattccatttccacccccacgtctcgatcgccggcggacggcggaggcatttccgcccgccgccgccgctccctctctccgtgcggcagcttgaagcgcgcttgcgcttgctttgatttctgatttctgatttgtgagggggacgaggaggaggagatgggcagcgtggggctgaacgacacggtgtcaggggtggtgtcgaggaaggtgctcccggcgtgcggtggcctctgctacttctgcccgggcctgcgcgcccgatccaggcagcccgtcaagcgctacaagaagatcatcgccgacatcttccccgccactcaggtcctctcttgctctctgccaaccgcttccccccgcccctgtagatcgtcatgtcctggaagaaatgcttcgattttaaaacgcgaatattagggaaggacctaatagcaaataattagaagaggtgaggcttcgaactcaggtcgcttagcccaccatatcgtggagctagcctttctcgaaatgcttcgatttttgtaatcccttgggaagattggagcgcggattgcgatcccattatattttgctatatgctcgattattgtcttttgttttttggtttgctcaattcacaaggttgcccttccccttaataggttatagtctccagtttttcgagaaatatatttttagataatgaaagcttgtattgaacccggtcaattacatcaaggtgatacgattcacgaaatatatagtgccatggcctacattgctcatctacatgttctagtagctaatgcctagtggcctacattgacacattgttctactagtttttagttgcatggcctacattgctcatctgcaccgcatgacttcttgttctgcaggacgaggaaccgaatgagaggaggatcgggaagctgtgtgagtatgttgctagaaaccatcatcgcgtgccaaaggtgcggccatcgactccgactcagactttatctattcatccaatttctactgcgctttttattacagaaactctgcatagagaaaggctgttgtgttagaaaaagaagtagtactataagaacagatcatctaaaacatgttgtaaactactacagtgggttcttttatatcggatactcctcttttattttgttgtttttaaatggatatgacttgggaggaactatgtacatggtataacaggttactagttatacttagttttttcttcagacacaacagttattttcattgtgctctaagctaggggaactcttgttcattactgtctgatttgcatgataatcgtcctgtacactcagaatgatttgtagttgccatttgacttccattctcttgcatattgcatctttgcagattacagcttacttagagcaaaggtgctacaaggagttgagaaatgagcagtatggctttgtgaaagtagttgtgctaatataccgcaaactacttgtctcctgtaaaaagcagatgtgagcctttgtttttcacattcagattacattgctgtgaccagtaccaaatatatctcattatatacctgtaaattacgttcaaacagatgtggatttcaaacagaagatactttccattacctgtaaattattttcgaatagctacaaaaatctaaaaactgatttcctcagtgcaggccattactggcaagtagcgcattgagcatcatatgcactcttttggatcaaacaagacgggatgacatgcggattataggttgtgaaaccttgtttgattttaccgtctctcaggtattgcatttgtatagtctgtagcggatgcctttctttgctcaaagatctgtttcaaacagcatcttctgatctctgatttgattcgaggtggacggcacatatcaattcaatttggaagaacttgttccaaaactctgtgaattagctcagatagtaaaggcagaggagaaggataacatgctccgtgcatcaaccttgcaagccctttcagctatggtatgtctccctgcaacctgcatgatattgtttaatgtgatgttatctttgctaaagctaaatattctgctagagttaaggacccttcttagaagtatataatgccttgttgcatcaaaactatacttttacattgtattccactgaaatcatgaggttgtcactaacattgttgacattcagacttgccttctcttgtaatttatagagttgttaatctaataattgcaaacagagttgttaatctaagcatagcaaacttctttcaccaaatatgattcttctaatattgacagttttcattttcttgtattgaacagatttggtttatgggcgagttttctcacatatcctccgcgtttgataatgtaagtggatggcaaaaattgttgaattagtgctgtataaatatgcaaagccttctcaaattgttatgaaaatagatgcacaacggagacacgaattttatgtggaaaacccttgcgggaaaaaaacataggcgccagctagcaatgatcactatagaggaattggatacagacgcaggggatacatttggctgtcgcaccctccccgtgtgacttacaagggatatatataggagaaatctaggagtcctaataggcaaagactcgaagtcctaataggaaactaatcctataatgcggagtcctattagaaaactaatccgaatatattgtgggcccaaaattcggatcacatatttaacacaaatgttgtgacacatatctctctatggaagcttgctcagagtactatttggtgccatacacgtttgtctagagggaaaatgtgggtttcttttggaagcatcttgatatctcaaacttatattatttattttcactatatctgctaggttattcaagtagtgctggaaagctataaccttcaaaagatgcaaaatgacaatatagacagtgaagctccaggcaatcggtgggtggaacaagttcttaaagcagagggcaacgccaccatctctaggataccttcttggaagagcatagttgatgacaagggagagcttcatctacctgcgtaatatgactttctttggtcttttcttacttcatcttgtttcatggccacatgtttagccgactcctgtgctgcagggaagatgccaaggatcctaacttttggtcacgagtctgtgtgcacaacatggccaagctgtccagggaggcaacaacattccgtcgtgttttggagtccctatttcgtcactttgataataataattcatggtcttcccagaacacacttgccttttgtgttcttttggacatgcaaatattaatggaaaaccaaggttctctatttgcatccctttttaggcaactggatttagatatttgatgcgcacatgaaagtgtttactcatttttctttggtttctgcagggcaaaacattgacttgatgatatcaatactggttaagcaccttgaacacaagtctgtactgaagcagccagagatgcaactcagtgtcgtggaggttatagcttcccttgcagaacaatcaagagctgaagcatcagccgcaaccataggtgctataagtgatcttattagacatatgaagaagacattgcatgtcgctcttggcagcagagatttggaggtcataaagtggaacgacaaactccggaatgctgttgatgaatgcatactccaactgtcaaagaaggtcctttactcttgaactgaaacttcttttgtgaattgtgacattctgcttgctgtactttgtcttcatcccttacagaattccaatcagatgcttcctagtgtggtaataggctgtataaatttcattgttattggattataatggtaggaacatacgccttactatgttggtattattacacaggttggtgatgctggacctgttcttgacatgatgtctgtgatgctagagaacatctcccgcactccccttgttgctatagcaaccacatctgccgtttatcgtacagcccagataattacttctatcccgaatttgtcatataggaataaggtatgttgtggaaacacaaatattaaatttgaatttatattatccagcaacacttgtatttgtttggaagctcactctccatcatatttttcaggtatttccagaagcactctttcatcagttactcttagcaatggttcaccctgatcatgaaactcgtgtttctgcacaccgcatattttctgttgtccttgtcccgtcttctgtttctcccttctctaaatcaacatctccaaatcagcttgtgaagcatgatattaagaggactctctcaagagctgtctccgtcttctcgtcttcagctgctttgtttgataaattaaaaagggacaaagagtccttcagagaaaaaccacaggatggaagcatgaacagactttcgcatgctgctgacaatgatacttctacagtcaaggacatgccaagctcgcgaagtcgaaggcacagcttcaaagttcctaatttttctatgaaaagggttgcttcattgtctctgaaatctcccatgtccccaaaggaatgccaaaatacctcggccgaatcatgtagtgaaacggtattctcgtgtggaacctgatctcaatctcgttttcaatatttaacaagctagtaacatttgagcaaaaggaacatctatttaactatcttctgtgcactttcaggaatcaactttgttgagactaagcagtcgtcaggccacacttttgctgtcatctatttgggctcaagcaatttctcctaaaaatactcctcaaaattatgaagctattgctcatacttacagtttgcttctgttgttctcgggatcaaaggtacttcttgttatgttgtattatccaccttacatatattcttaaatgtttccagtcaacaaaactgtaaatttgattatatgatcatatatgagaaatttatcatgctgcatgtaacatccttcattcctgtccatattgctgttattctctatccaagactcatttgtaatatttgtaatggtctttccacatctaatacttagcttcattaccctgttttatcatatttttttatgttttatctttttgctcttccaggcatcaatctttgaggctcttgctccaagttttcaggtggcgttttccttaatgagttattcactagaaggaacaggtaaggtggttaatcatactgtctagcttcagtactgatactatataagttcttaactacccacataggatgaaactctagtggatgatatcttagctattactaaagtacgactgagttagttccttgataattacctaaccattttaatcttgctttttagattcattgctgccatctcgccgtcgatccttgtttactctggctacatctatgattatgttcttttcaagggctttcaatgtggcacctcttatcccgatctgtaaatcaatgctcaatgaaagaacagtaagtctgataaaaatgtctcatctcttcagctcttctttttgtataatttgcctggtataacagaatacaattgttttttcaacaattgacaattttgaggaggcatttggtaatacctacatggattgtaccattgaggcatcaaccatacttaaatctttccatgttgattttctaacggtgtttgttgctttgatatatgccctctttatttaccatacaaacttaatagctaaactttatgtattgcttttgttggcagatggatccattccttcatttagtacaagacaccaaacttcaggctgtgaaggactgctcagaagaaacctatggatcaccagaggatgataataatgcactgaagtctctttcagcagtagaactaactcagagtcaatccagagaatccatggcctctacaatcatgaacaacataagagatttaccagatgtaacattccatattttcttccaaaggatctcttatattgtttgaatcttgcttcagaatagaaaatctgtttgaagcaaaccctatgcaaattttactgacaattatttccaacctctgcagtcagaattacaaactataagaagtcaactgctaagtgacttctcccctgatgacatgtgtccaacaagtgctctcttttttgaattaactgtcagaaatccaggttgtgatgaggattctagcaatcaagaggtaatatgaatcctacgtattatatctttcttttgttcttcttctttttccatcctgaccactaggaaatgagcaggatgtgctgatcaatatggcaaatgacaatgacacctttggggaagtctacgaaaatacagaagctactacagcatctgtgcccacagcaaatcttctgggtatcgatgagcttctagaatcagtacgttcttcttgtttccatctatcactcccctccttttttgctcttatgtactagtatatatttaactgattgaactttagcgtgattttagccaaaaatcgcatagtcagaccatgaagaagtactgaatttttagcttctctctttcatgtggctgaagtaaagaaccaaaacctaaggcaaaaactgtctgacactgacatgatcaacttatacctgtacatgctttctacaggttgtcactgatgcaccatctcagactgcaagatgctcggtgtcaacggcccccaacatcccattcaaggagatgactaaccaatgcgaggttctttcgatggagaaacagcaaaagatgtccgtgctcctgagcttcaaacacaaaaaccaatcaaatgtcctgccgatcaatcaagctgacaacacgggagcagtccatatttcctctgacgaccaggtgcctaagttcagaacaatttgcttgatactatcatcttttcctctttgcccattttaccaatgcatatcagtctggaatcgggagaaatgaaacaaaaactacaagtatcatggaatgggacgcatagattagttttactaattcttaaaccatcttgtattgctgcagaatacgaacccttttctccagcaaagccttgatggctaccccaaatatgttgctgatggtgaggcactacaggtagcagctgatgatgtgttccagcagcaattcttgaagctgccagcatcaagcccttacgacaccttcctcaaggccgctggctgttgacactccaggggccatgctgctaagacaagacatgtactgattaattgtggacactaaaaagtctgcaattgtattgtaaccagtgtatgagtgcagcctcttcttaattgcaagatgtaaatctcctcctattgtcaatttgtcatgttccgatccaacggctgggaaggaacatcgcattctccctgcttttgtttgtgcaacggtagaggaatagtttgagaagttcaaactatggtacgaaacacataatttaatccatacaaatcgataaccttatttt</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001052402.1 RefSeq:Os02g0143200]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 2]]
 
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[[Category:Chromosome 2]]
 

Latest revision as of 06:26, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information