|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]] |
| − | GeneName = Os02g0496500|
| |
| − | Description = DNA glycosylase family protein|
| |
| − | Version = NM_001053426.1 GI:115446222 GeneID:4329407|
| |
| − | Length = 8710 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os02g0496500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
| |
| − | AP = Chromosome 2:18225214..18233923|
| |
| − | CDS = 18225341..18225377,18225600..18227096,18227937..18228027,18228132..18228699,18229669..18229748<br>,18230071..18230155,18230250..18230341,18230433..18230501,18230581..18230617<br>,18230719..18230801,18231295..18231750,18231839..18231875,18231961..18232050<br>,18232598..18232663,18232782..18232896,18232980..18233018,18233597..18233778<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008395:18225214..18233923
| |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008395:18225214..18233923
| |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgggggcggaggcggaggaatcgctagatcatcctggatctctgtcggggatgtcgccggcgacccccgacgttgcctggaagccggcggagcggcggcggcggcggtcggaggccgacgcggaggggtcttcttgctgctccctttccgctgctacggcggcgtgggttggcgccggtaatgtggagagtgacgacccgtctgttcgttcggtcgccgccggggagcaatcccgctccgtgtctcggccggaggaggaggaggaggaatgcgcgtcatgtacccaggattccaccgtctctccgccggtgagcgaatgcggcgacaggactgcgcagcaggaacccagcacccaggagtacaccgtctcgccaccgccggtgagtgagtgtggcgacaaagttgtgcagcaggaatccagcaatcaggagtccaccgtctcgccaccaccggtgagcgaatgcggtgataagattgcgcagcagggatccagcactcgggagtccaccgtcttgctgccggtgagtgagtgctgcaacaaggttgcccagcaggaatccagcacccaggagtccaccgtctcgctgccggtgatcgaatgcggcgacaaggtcgcgcagcaggaatccagcacccaggagtcgaccgtgtcactgccgtcgagcgagtgtggagacaaggttgcgcagcaggaatccagcacccaggagtccaccgtgtcgctgccgttgagcgagtgcggagacaaggttgcgcagcaggaatccagcacccaggagtccactgtctcgccgccggtcagtgaatgtggcgacaagattgcacggcaggaaggtgctgccagtgcgatccctacgccggagaaagtggaggctacccctaggagacccaggaagaggtcaacgaaggggttgactcgattcaagattatgaaagatcacaaggcggcccagagaacggcaacacccgttgaagttaagatcaagaggaaagctaaggataatggtaggcggccacttggtgataaatcagtgaggaggaagttgaattttgaaggcgatgcggtggactttgaaggcaatagggagttcagcagagccaagctgatggaggatttgaggtgccttgccaaggttcatggtctgcgcgatgatctgggtgcaggcaagcgaagcaagaaagggaagaaaagaaaaaagatgactggagaacatcaggacaatggcgaatcggcccttgtgccttaccagaaggccccagctgccacatcatcatctgcgctggttccaattcagaattctacgcaacttgctattgtacaccacagaaatcacttgaagaacttgcggacaaaggttttaggccttgatgagaagacattacaagtgtataatgttctgaggaagtgggatgagactgatagtgagagtttcgaaggtgtagacattggcagcgggcctgaatggaatgaaactcggcgtcacttcgaacattacgtggatgtgtttattgctactgtgcatggtttattgggtcccagaagattttctgaatggggaggatcagtaactgattctgttgtgggtactttccttacgcaaaatgtcgctgacaatttatcaagcaatgcttttttgaacctggtggcaaaatttcctccaactaagagacatattaatgctgaagcatgttcaaatttgtctctgttgatagatgacatgagacggaaattgaatttgaatgaacaatctaatggtactgattctggtagttcagattttacaaaacctgtcgattttgagaaagagaatggttacaatgaggaggtaaaaggtaattatggccgagactacagtacaattatagagaattttatatctattattgagaaacatcataaagacatgtctacgtgggacaatgcacgccttgagaacatggtgaaggataagtctggaactccagtatgttcccatagaaccttgagaaagtttatggacacatttgaggagaaagacacttctcattgggataagttacgggaggaagcatatagtaagggatacaaaataaagggaaccggaataagtgattctgctgattgggaagctgtgctacatgcaccagcagttgagattgcaaattccattgcagtcaggggacaacattatgttatagcattgcggatacaggcttttctcaagcgtgtaaagaaagatcatggaaattttgacctggattggcttagatatgtaccacgtgaaagtgcaaaaaattacctcatcagtattctggggcttggagataaaagtgttgactgcatccgtcttttgtcattaaagcataaaggtttcccggttgatgtcaatgtagctcgcatagtcacaaggctaggatgggtcaaacttcaacccttacccttttctgcagagttccatttagttggcttgtatccaatcatgcgtgatgtgcagaaatatttatggcctcggttgtgtaccatttctaaggaaaaattgtatgaactacactgcctcatgataacttttggaaaggcaatctgcacaaaagtaagtccaaattgcagggcttgccctttcagtgcgaaatgcaaatactacaacagttcacttgccagattatcactccctcctgcagaggggcatgggcatgaatatggtgaagagcaagcaagcactgctactcctggaagactcttgttgtcaaatgatagccacatagcaggttttcaacaagtatgtcaaccgcaaatcaaaataaacatgcctgctggaagagaatccatctataagtgtgagcccattattgagatacctccaagtccagaacatgaatatgaagaatcaccttatgagcaagaattatatgaagatgatctttgtgatattgaagataccataccagaattacagtatgattttgaaatagatctgtgttcactaaagcacacggtgaataatggctcttggacaccaaactctggaaaagacttggccttgattaattcacagcatgcctctgttcaaaacaaaaggttgaaaaacatagggcgtcttagaacagaacacaacgcgtacgtcctcccagatgatcatgcaatcttggaagagtttgaagatagagttccagaagatccatgtccttatcttctagttgttatttcttgttctgatgaacacacagtgaaaggcacaattctgataccctgtcggacagcaaccagaggaaactttccattgaatggtacctactttcaggatcatgaggtttttgcagatcattcatctagccgttccccgattaccatccctagagaatgcatctggaacctagatagatgcattgtatattttggctcgtcgatacaatcgatcatgaaaggtcaaacaaggcaagacattgaggactgctacaagaaaggatatatttgtgttagaggatttgatcggaatacaagatacccaaagccaatatgtgcaaaattacacgccaccaatgaaaggaacggaacaggtgaaaatagccggaagaagaaaaagacatcacaagaggggaagaagattgatgacaaatcttcctttggcaaattagaaattaactga</cdnaseq>|
| |
| − | AA = <aaseq>MGAEAEESLDHPGSLSGMSPATPDVAWKPAERRRRRSEADAEGS SCCSLSAATAAWVGAGNVESDDPSVRSVAAGEQSRSVSRPEEEEEECASCTQDSTVSP PVSECGDRTAQQEPSTQEYTVSPPPVSECGDKVVQQESSNQESTVSPPPVSECGDKIA QQGSSTRESTVLLPVSECCNKVAQQESSTQESTVSLPVIECGDKVAQQESSTQESTVS LPSSECGDKVAQQESSTQESTVSLPLSECGDKVAQQESSTQESTVSPPVSECGDKIAR QEGAASAIPTPEKVEATPRRPRKRSTKGLTRFKIMKDHKAAQRTATPVEVKIKRKAKD NGRRPLGDKSVRRKLNFEGDAVDFEGNREFSRAKLMEDLRCLAKVHGLRDDLGAGKRS KKGKKRKKMTGEHQDNGESALVPYQKAPAATSSSALVPIQNSTQLAIVHHRNHLKNLR TKVLGLDEKTLQVYNVLRKWDETDSESFEGVDIGSGPEWNETRRHFEHYVDVFIATVH GLLGPRRFSEWGGSVTDSVVGTFLTQNVADNLSSNAFLNLVAKFPPTKRHINAEACSN LSLLIDDMRRKLNLNEQSNGTDSGSSDFTKPVDFEKENGYNEEVKGNYGRDYSTIIEN FISIIEKHHKDMSTWDNARLENMVKDKSGTPVCSHRTLRKFMDTFEEKDTSHWDKLRE EAYSKGYKIKGTGISDSADWEAVLHAPAVEIANSIAVRGQHYVIALRIQAFLKRVKKD HGNFDLDWLRYVPRESAKNYLISILGLGDKSVDCIRLLSLKHKGFPVDVNVARIVTRL GWVKLQPLPFSAEFHLVGLYPIMRDVQKYLWPRLCTISKEKLYELHCLMITFGKAICT KVSPNCRACPFSAKCKYYNSSLARLSLPPAEGHGHEYGEEQASTATPGRLLLSNDSHI AGFQQVCQPQIKINMPAGRESIYKCEPIIEIPPSPEHEYEESPYEQELYEDDLCDIED TIPELQYDFEIDLCSLKHTVNNGSWTPNSGKDLALINSQHASVQNKRLKNIGRLRTEH NAYVLPDDHAILEEFEDRVPEDPCPYLLVVISCSDEHTVKGTILIPCRTATRGNFPLN GTYFQDHEVFADHSSSRSPITIPRECIWNLDRCIVYFGSSIQSIMKGQTRQDIEDCYK KGYICVRGFDRNTRYPKPICAKLHATNERNGTGENSRKKKKTSQEGKKIDDKSSFGKL EIN</aaseq>|
| |
| − | DNA = <dnaseqindica>128..164#387..1883#2724..2814#2919..3486#4456..4535#4858..4942#5037..5128#5220..5288#5368..5404#5506..5588#6082..6537#6626..6662#6748..6837#7385..7450#7569..7683#7767..7805#8384..8565#agccggatggataggtagcctcttctccctcctcacgccggagttttccccgcacgcacccacaccaaaccaaactctactcgatctccacggccgtacacgatttcccctccctggagccagcgcgatgggggcggaggcggaggaatcgctagatcatcctggtaagctcacgagttacttcttcgtcgtgttttcttttttccttttgagggggcaaatctgttggttgttatggtgtttgcaagaattgatgtttgtttttgcttgatctgtgatatctgttccacggagtggcggtggggaatctgggtgctgttaattttcctccggatttttccgttttgtgaccgtttcgttttgttttgatttttttttcggagcaggatctctgtcggggatgtcgccggcgacccccgacgttgcctggaagccggcggagcggcggcggcggcggtcggaggccgacgcggaggggtcttcttgctgctccctttccgctgctacggcggcgtgggttggcgccggtaatgtggagagtgacgacccgtctgttcgttcggtcgccgccggggagcaatcccgctccgtgtctcggccggaggaggaggaggaggaatgcgcgtcatgtacccaggattccaccgtctctccgccggtgagcgaatgcggcgacaggactgcgcagcaggaacccagcacccaggagtacaccgtctcgccaccgccggtgagtgagtgtggcgacaaagttgtgcagcaggaatccagcaatcaggagtccaccgtctcgccaccaccggtgagcgaatgcggtgataagattgcgcagcagggatccagcactcgggagtccaccgtcttgctgccggtgagtgagtgctgcaacaaggttgcccagcaggaatccagcacccaggagtccaccgtctcgctgccggtgatcgaatgcggcgacaaggtcgcgcagcaggaatccagcacccaggagtcgaccgtgtcactgccgtcgagcgagtgtggagacaaggttgcgcagcaggaatccagcacccaggagtccaccgtgtcgctgccgttgagcgagtgcggagacaaggttgcgcagcaggaatccagcacccaggagtccactgtctcgccgccggtcagtgaatgtggcgacaagattgcacggcaggaaggtgctgccagtgcgatccctacgccggagaaagtggaggctacccctaggagacccaggaagaggtcaacgaaggggttgactcgattcaagattatgaaagatcacaaggcggcccagagaacggcaacacccgttgaagttaagatcaagaggaaagctaaggataatggtaggcggccacttggtgataaatcagtgaggaggaagttgaattttgaaggcgatgcggtggactttgaaggcaatagggagttcagcagagccaagctgatggaggatttgaggtgccttgccaaggttcatggtctgcgcgatgatctgggtgcaggcaagcgaagcaagaaagggaagaaaagaaaaaagatgactggagaacatcaggacaatggcgaatcggcccttgtgccttaccagaaggccccagctgccacatcatcatctgcgctggttccaattcagaattctacgcaacttgctattgtacaccacagaaatcacttgaagaacttgcggacaaaggttttaggccttgatgagaagacattacaagtgtataatgttctgaggaagtgggatgagactgatagtgagagtttcgaaggtgtagacattggcagcgggcctgaatggaatgaaactcggcgtcacttcgaacattacgtggatgtgtttattgctactgtgcatggtttattgggtaatagtccggattctagaaacttctttttctccttttttcttctcttcacatgtgtgcagcacatgatagaacataagaagtatagagacataacaagcaaaatgcactactagtttgatttctctaagtaggctgggagatatttgtagtttggtttgtctaagtaagccaggagatatttcagtatgcacatcacacaaaagcactgaactttttatgttgaaaatctctactgacatgttagtgttttgtttggaataaaagtaagcgcaagcttgaagatttgtgaactcttacaaaaactaagcaatcctggtggctcaaatgatatcttagtaagaaatgaacttattgatgatttattagtctacagttctaaacaagagaacaatcaataactgcgccaagttgtacactccagattttgaaatgcttaatttaaatgtgaccagctgttttattttccatctcttagtttctaaattggggtgaaattacttaaaatcaatcaggtgcatttttctgagcaaacttggaagcacatgtatgaacatcacttgggtaggtcggtgagaaaaaaaaaccaatcagcatgatgtataatttgatcaaatcatttacttcagtttttgtctgaaaaaccaaggaaatgaaatcagcagcatttttcatcgttggtacaataattattcctggttaatgatttcaaagcaatagagcctcacgtccactttatacaacatatgcgtatgggatgaaacgagtcttggaatcctctgcttcattgaaacatgcagatttaaattggattctaaatccaaactacttttctgtcaggtcccagaagattttctgaatggggaggatcagtaactgattctgttgtgggtactttccttacgcaaaatgtcgctgacaatttatcaaggtaaaacttagacgcaatctgatgtctactttacatgtttgtgctggagcgaatctatcagctgcatttcatgtttctgattataattttcaataaacatgcagcaatgcttttttgaacctggtggcaaaatttcctccaactaagagacatattaatgctgaagcatgttcaaatttgtctctgttgatagatgacatgagacggaaattgaatttgaatgaacaatctaatggtactgattctggtagttcagattttacaaaacctgtcgattttgagaaagagaatggttacaatgaggaggtaaaaggtaattatggccgagactacagtacaattatagagaattttatatctattattgagaaacatcataaagacatgtctacgtgggacaatgcacgccttgagaacatggtgaaggataagtctggaactccagtatgttcccatagaaccttgagaaagtttatggacacatttgaggagaaagacacttctcattgggataagttacgggaggaagcatatagtaagggatacaaaataaagggaaccggaataagtgattctgctgattgggaagctgtgctacatgcaccagcagttgagattgcaaattccattgcagtcaggggacaacattatgttatagcattgcggatacaggtataaggttgcaagatacacgtctatttgcttgtttaaaaaactctgttctaacattagtgtagcaggaagatattcctgaataccttcgttctggcgatgaacatattcaccttttgcaaaattgaacttaatcaccattttgtatcatttttggccagcatatcggattaaatatatctgtagtttcaaagtggtttatgtattcaatattacttcattactagtttagcatccttttttactaggacattattcttaaccaaattcatttccttaagtaggcatttcaatcacttactgtctgttttcatgtgtgtctattgaaataagctttgcttacagcatgtctacataaataggtcttataaatctgaacttaaagatggaccgttttattactttgtttcatacattatagattatacattgtctcatactaatgacataacggactaatactttgcatttaaactacatttttcaaataccctggatatatggtacatttctattctcgcaatatgtgtggccagtggcattttagaacatttattgtttaaattttaaaatgcccattgaaagaacaattttactactgatgcaattaatagattcatgatcaaaagtgcagtttacagaccatgttgatatttgaaataccttttattttcttatccacataattgtatctattaaaaatatatgtgatccaataagaaaatgattgaaacatcagctatgatctaagctcgacctccttattcctgaaaaaaaaactccacactttatgcaagaaaccaagatttacctataatattttgattttaacatcattgtcagtggaaagatcatttttttccatgtaagctatggttttgatattactggaactctcacatatttcttgtcttcttcttcttgtgcatttgacacacagcactaaaagtattccttttccttttacaggcttttctcaagcgtgtaaagaaagatcatggaaattttgacctggattggcttagatatgtaccacgtgaaagtgcaaagtatggacatatttcataaaaacctacactatttttagtatgttcttttttttacgctatgtacaacgtgaaaatgcgaagtatgccttttttttaaaatgttgaactgacagtaaatagctgacaatggtaattctattccgtatataagtttagaactatttcccatatttgttacgttgaacttcagaagtattattgaaggaaaaccagggaacttgttgtagggagcttctatcaagctagctgaaaataacaattcgtagttgttgactgggttacttgccttatattttgcttcttcttttttggcgggcattagaaattacctcatcagtattctggggcttggagataaaagtgttgactgcatccgtcttttgtcattaaagcataaaggtttcccggtaagttatatttttctaaaaagaaaaatcaaatattgtcaacagagtacgtttcattgatcaatctcttgacaggactgcatgctcctttcaggttgatgtcaatgtagctcgcatagtcacaaggctaggatgggtcaaacttcaacccttacccttttctgcagagttccatttagttggcttgtaagattggcctcacccaaatttataaataatgattacaattctctgcttatacatacatatatatttatatatttcccttttggtgaaggtatccaatcatgcgtgatgtgcagaaatatttatggcctcggttgtgtaccatttctaaggaaaaattgtaagtcatttggtcctctaagaaaagtttgtcatacctttggttttcggcatcccatctgatgaacctgatacgataggtatgaactacactgcctcatgataacttttggaaaggtatgcatatatatcgcagtgatcagcatgattctgcatcattttaggcacataaatgtttacattgtcaatattgattgtgtattgtttccattacataggcaatctgcacaaaagtaagtccaaattgcagggcttgccctttcagtgcgaaatgcaaatactacaacagttcacttgccaggtatttttcatagattgtgaagttattgcttaaattgattatcagaatgatctaaaatattgctatggtctgtaacatcctttgttagagcttaagtagtatcctttgcatgatcaaattaatcggtactgtagcatatgttgtaaactctgttaagagcatgttaatgagttgtccctgtgtactctagtctatgtgtatcttcaattgttatttcttttatacggaactatgagcattccataaaatctgcaacacaactaaattgcagaccacccttaggctaaaccaatcacataatgcaactagtgaggttagaagtccccctgaatgttgttatatttgctgcagtgtaataacaagagtagtcttagttatcatagtatatttattatgtctattttagggcataatatgttgcgatttgtagatctttttttatttggtctcatttaaattagagtactgtatcatgacactgggttgttaccagattatcactccctcctgcagaggggcatgggcatgaatatggtgaagagcaagcaagcactgctactcctggaagactcttgttgtcaaatgatagccacatagcaggttttcaacaagtatgtcaaccgcaaatcaaaataaacatgcctgctggaagagaatccatctataagtgtgagcccattattgagatacctccaagtccagaacatgaatatgaagaatcaccttatgagcaagaattatatgaagatgatctttgtgatattgaagataccataccagaattacagtatgattttgaaatagatctgtgttcactaaagcacacggtgaataatggctcttggacaccaaactctggaaaagacttggccttgattaattcacagcatgcctctgttcaaaacaaaaggttgaaaaacatagggcgtcttagaacagaacacaacgcgtatgtaaccctgttttttttatatactgctatattatcctgaaaaatcaaacggtatcttgctaagcttgataagttgttgtcacaggtacgtcctcccagatgatcatgcaatcttggaagaggtatgttgtatgccatgagcctgtaagttcaatttttactacaatgatgaaatatatttagtgaccggtttgcaatgtctaccagtttgaagatagagttccagaagatccatgtccttatcttctagttgttatttcttgttctgatgaacacacagtgaaaggcacaattctggtgagcaaccacttgtttggaacataactgtaaggtgcagtgtaaaagataatattgtgctctcgattctcaagtaacatgggctcattattaaacagagtcaaaactcagattcagaattttggggatatgcatatctatataaaacaatgttgatatttgtaccaaaagttaccgaaattgaagttaatatcaaaattaacaaaattttcatttgaacttatgagaccatatcacattgttgaacttacagaaattcaattgtagatatttcttacaaggtagaatgagaggtttttcaactgtaaattctgtcataaacatcttatgcaaattcaaaatcataagaaacaagtgatagtttcttatcttctgtgttctcagtttggaggaaattagtacgagttgatccacaaccctcactattctaaggacaatattttttgtttctatatgtaaccttaaattagttttcacttaataaagattataatatgagtaatttttttctcctttttgattagtttttgcactcactattgaacagataccctgtcggacagcaaccagaggaaactttccattgaatggtacctactttcaggatcatgaggtttgcagcatttggtcctcttcactccaatttcatcttatgtacatttactagttataaataagatgaagaccatattggctagacattgatctgttatatatattatcctttacaggtttttgcagatcattcatctagccgttccccgattaccatccctagagaatgcatctggaacctagatagatgcattgtatattttggctcgtcgatacaatcgatcatgaaaggtattgtttgctgaaaggcgaacctgagattcatgaaataattgctttgactgatactaagttgaagtaatcatcaattccaggtcaaacaaggcaagacattgaggactgctacaagaaaggtaccaagtggttgtaagatttatttcctctttgatgtttctgtcttcgacagtccgacagaatttagatactgaataagctaggtatcttacaattaaaaataaacatagctagaacataagggcctgtttggataggggtgactggcattaagtagattaagatatagtttgaagttgagccatatcccacaaatttcgaaagctatcttacagctcaaacagctgaaggccagggataaatcagtgaacctcagaaaattcctactgaaagtgcatccgcttatgcgtagcataatgataccctgttaggtattgttgggtttgaaggggattgaagaggattggggggattgagagggaataattccacaccacaataggtgtggaataaatcccctccaatccctctcatggggattaaccgaacaggccttaggtggagtcaacccacaactccaccactacactacaaatataccactacactacaaatatgattccctctatgaaattgtatatgattcattttcttgtatcacttatacacaattatgttgcaattttttcttttgcaggatatatttgtgttagaggatttgatcggaatacaagatacccaaagccaatatgtgcaaaattacacgccaccaatgaaaggaacggaacaggtgaaaatagccggaagaagaaaaagacatcacaagaggggaagaagattgatgacaaatcttcctttggcaaattagaaattaactgatatatatatatcaccattaacaaagttgtgtacaaattgtagttggaaggatgctgatagcctctgctagctctagtgtatcatgtagatcagtagatttgcttagggcggctgcatgagtaaatatttggttgagatctcttcc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053426.1 RefSeq:Os02g0496500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 2]]
| |
| − | [[Category:Chromosome 2]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
