Difference between revisions of "Os03g0100400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0100400| Description = Similar to DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet hypersensitive 1) (AtRAD1) (DNA excision repair prot...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
{{JaponicaGene|
+
Please input one-sentence summary here.
GeneName = Os03g0100400|
 
Description = Similar to DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet hypersensitive 1) (AtRAD1) (DNA excision repair protein XP-F homolog)|
 
Version = NM_001055180.1 GI:115450088 GeneID:4331279|
 
Length = 5326 bp|
 
Definition = Oryza sativa Japonica Group Os03g0100400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
|
+
===Expression===
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
+
Please input expression information here.
AP = Chromosome 3:44762..50087|
+
 
CDS = 44806..45689,45826..46055,46962..47071,47381..47545,47672..48463<br>,48730..48840,48935..49195,49415..49638,49735..49945<br>|
+
===Evolution===
GCID = <gbrowseImage1>
+
Please input evolution information here.
name=NC_008396:44762..50087
+
 
source=RiceChromosome03
+
You can also add sub-section(s) at will.
preset=GeneLocation
+
 
</gbrowseImage1>|
+
==Labs working on this gene==
GSID = <gbrowseImage2>
+
Please input related labs here.
name=NC_008396:44762..50087
+
 
source=RiceChromosome03
+
==References==
preset=GeneLocation
+
Please input cited references here.
</gbrowseImage2>|
+
 
CDNA = <cdnaseq>atgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcctggtggtggtttcgtgtggcctcccggtggcctccctggcgtccgccgtcctcctccagctcttccaccaatcccccgacgatggctgcttcctgatcctctccgcccccgagccggtcaaagctcaaatccggcggcgcctcctcctcaactcccagagccagcctcctctcttgcagctgcaggtccacgacgtggcccccgacctccccgcccaccaccgcgtcgccctctacgcctcccgcgccgcgctcttcctctccccccgcgccctcgtcgccgacttcctcacctcccgcctcctcccctcccgcgtccgcgccctcctcctcctctccgcccaccgctcctccgacacctcctccgacgccttcgtggctcgcctcctccgccaccaccacctcctccctgtttatgccttctccgatcgcccccatgccatggtctccggcttcgccaaggcggagcgcgctatgaagagcctctacattcgacgcctccacctttggccccgcttccaccttcttgctgccgctgacctcgagcgctccccgcccgaggtcatcgacgtccgcgtccccatgactcagcctatgaggggcatccaggccgctatcctcgatgccatggacgcctgcctcaaggagctcaggcggaccaacaaggtcgacgtcgaagacctcaccgtcgacaagggcctcttcaagtcttttgatgagatcgtcaggaggcagctcgaccccatctggcacacgctcggcaagaagaccaagcagctcgtcgccgacctcaggacgctacgcaagctgcttgattatcttgtcaggtacgatgctgtgacataccttaagtacctggacacactcagagtatctgaaggcgtccgatctgtttggatatttgctgactcaagccacaagatattcgacctttcaaaaaggcgtgtctaccaggttgtgagagcagacggtacaaaggttgcagcagacaacaagggcacaccaacaaagaagaggaaggtggcacgcgctagcagcaggaaaggaaaagaaactgaaaatgagggttccagtgataacaaggacaatactcagaaggttaatgcagagatgggcattgtagtggaggagattttagaggaagcacctaaatggaaggttttacgggaactattgcaggagatagcagaagaacaggcaaagggagatggtgacaatgtaaaccctgttcatgaagacggaattaacgagagtggcatagttttggtagcatgcaaagatgagcgctcatgcgtgcagctgcaagaatgcatatcaaaaggctcgcatcaggtcatgcgggccgagtgggagaagtacttgcttggcaaagctgaactgcatggattgcataggaagaacaagaaaacatctcagcaactaaaagggtttggtgttctggatggggaagttcctatgaggtctggtgagagtgcaggtcctgttagcattagcaaggttgaggctaatgccttacttgcggctgcctctgaaataagcactgtaactaaggaagcaaatcttgctgatgattcaaatgtcagctgcaagaagagatcattcggaaaagggaaagggaaagggaaatttaagaaaaccatggcaaagagagaagccagtaagttgagaaacagaaatactacagaacatactgatttggaagttgaaggtcaatcaggaaaaacagatgaacaggctgagactgatgcttgtaagttgtctgcagaagatgattctgcatcagctccagctgttgacaaagctgctaacaatttatctgcttttggagactctgtggataccgaaccactacctcctgtgcaattttacgccctagacagtgatcagcatgtacttgatgtatggaaaccttctgtaattatcgtttatcatccagatataacatttgttagagaaattgaagtatacaaggcagaaaatccatcgatgaagttaaaagtttactttcttttttatgaagattctgccgaggtacaaaaatttgagtccagcattcgccgggaaaatgaagcatttgaatctttgatcagacagaagtcgctgatgatgatacctgttgatcagaatggccgttgcattggaccaactcttgcaaatgaaccagaagctcttttatctcaaaattcactaacaagaaaggcaggtggtagaaagccactagagaaggagatgcaggttattgtggacatgagagaattcatgagcagtcttcctaatgtattgcaccagaaaggtattcgaataatacctgttaccttggaagtcggtgactatgttctttctcctttgatctgtgtcgaacgaaaaagtattgcggacttgttccaaagctttgcttctggtcgtctctacaatcagattgaaaccatggttcggtattacaagatcccagtgcttctgatagaattctcacaagacaagagcttttcctttcagtctgcaagtgaaattggggatgatgtatctccgacaaatataatctcaaaactttcattactagtcctgcattttcctcggcttcgcatagtctggtctcgcagcttgcatgccacggcagatatattcctatcactcaaaacaaaccaggatgaacctgatgagagcaaggcaatgagagttggtgtgccctctgaggacggagttgtggagaatgacgtgagggctgaaaattacaatacgtccgcgattgaattcttgaggaggcttcctggtgtgacagattcaaactatagaagaataatggaggaatgcaatagcttagcagagctggccctgcttccggtagagcggctgtctgagttgatgggtactcagaaaggggcacgcatgctcaaggaatttctcgatgccaagtgtccaactatgctctag</cdnaseq>|
+
==Structured Information==
AA = <aaseq>MLPFEEQVVADLLEDPNGGLVVVSCGLPVASLASAVLLQLFHQS                    PDDGCFLILSAPEPVKAQIRRRLLLNSQSQPPLLQLQVHDVAPDLPAHHRVALYASRA                    ALFLSPRALVADFLTSRLLPSRVRALLLLSAHRSSDTSSDAFVARLLRHHHLLPVYAF                    SDRPHAMVSGFAKAERAMKSLYIRRLHLWPRFHLLAAADLERSPPEVIDVRVPMTQPM                    RGIQAAILDAMDACLKELRRTNKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKT                    KQLVADLRTLRKLLDYLVRYDAVTYLKYLDTLRVSEGVRSVWIFADSSHKIFDLSKRR                    VYQVVRADGTKVAADNKGTPTKKRKVARASSRKGKETENEGSSDNKDNTQKVNAEMGI                    VVEEILEEAPKWKVLRELLQEIAEEQAKGDGDNVNPVHEDGINESGIVLVACKDERSC                    VQLQECISKGSHQVMRAEWEKYLLGKAELHGLHRKNKKTSQQLKGFGVLDGEVPMRSG                    ESAGPVSISKVEANALLAAASEISTVTKEANLADDSNVSCKKRSFGKGKGKGKFKKTM                    AKREASKLRNRNTTEHTDLEVEGQSGKTDEQAETDACKLSAEDDSASAPAVDKAANNL                    SAFGDSVDTEPLPPVQFYALDSDQHVLDVWKPSVIIVYHPDITFVREIEVYKAENPSM                    KLKVYFLFYEDSAEVQKFESSIRRENEAFESLIRQKSLMMIPVDQNGRCIGPTLANEP                    EALLSQNSLTRKAGGRKPLEKEMQVIVDMREFMSSLPNVLHQKGIRIIPVTLEVGDYV                    LSPLICVERKSIADLFQSFASGRLYNQIETMVRYYKIPVLLIEFSQDKSFSFQSASEI                    GDDVSPTNIISKLSLLVLHFPRLRIVWSRSLHATADIFLSLKTNQDEPDESKAMRVGV                    PSEDGVVENDVRAENYNTSAIEFLRRLPGVTDSNYRRIMEECNSLAELALLPVERLSE                    LMGTQKGARMLKEFLDAKCPTML</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
DNA = <dnaseqindica>45..928#1065..1294#2201..2310#2620..2784#2911..3702#3969..4079#4174..4434#4654..4877#4974..5184#cctcctcactcggaaaggaaaagagcgccgccgccgccggcgtgatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcctggtggtggtttcgtgtggcctcccggtggcctccctggcgtccgccgtcctcctccagctcttccaccaatcccccgacgatggctgcttcctgatcctctccgcccccgagccggtcaaagctcaaatccggcggcgcctcctcctcaactcccagagccagcctcctctcttgcagctgcaggtccacgacgtggcccccgacctccccgcccaccaccgcgtcgccctctacgcctcccgcgccgcgctcttcctctccccccgcgccctcgtcgccgacttcctcacctcccgcctcctcccctcccgcgtccgcgccctcctcctcctctccgcccaccgctcctccgacacctcctccgacgccttcgtggctcgcctcctccgccaccaccacctcctccctgtttatgccttctccgatcgcccccatgccatggtctccggcttcgccaaggcggagcgcgctatgaagagcctctacattcgacgcctccacctttggccccgcttccaccttcttgctgccgctgacctcgagcgctccccgcccgaggtcatcgacgtccgcgtccccatgactcagcctatgaggggcatccaggccgctatcctcgatgccatggacgcctgcctcaaggagctcaggcggaccaacaaggtcgacgtcgaagacctcaccgtcgacaagggcctcttcaagtcttttgatgagatcgtcaggaggcagctcgaccccatctggcacacgctcggcaagaagaccaagcagctcgtcgccgacctcaggacgctacgcaagctgcttgattatcttgtcaggtctgctcatccactccataccttcacctatcattctgctccattaagctgttgatgattattccttcctggatggcatgaatcgcacacaaaaattctcttattcaaataataaaacttcttaggcattctctaggtacgatgctgtgacataccttaagtacctggacacactcagagtatctgaaggcgtccgatctgtttggatatttgctgactcaagccacaagatattcgacctttcaaaaaggcgtgtctaccaggttgtgagagcagacggtacaaaggttgcagcagacaacaagggcacaccaacaaagaagaggaaggtggcacgcgctagcagcaggaaaggaaaagaaactggtagcggctaccggccatttcctttcaatcgcaactaatgccttttcttaaagaatttagatataggcctcttaatttcatgaaaaaaataaatattttccactcaataggagtggctttaacgactttccactgcatagatactaattaattatttgccactccatagacagtcttaatataagatcttcccagtcattttctttgcgatcaccccaaaacaaaacgcagtggccacctatcttgttgctttacgcctcctctaaccagacttggtctggtcaaataagctcaagcagagctgatcaggggacatgccacttatcttcttccctgacttctctatccaagcgacaatacaggcgacatggcacgccggcgccggcaccgccaaggaaggtgcactagcaggggagccattagcaagttggatcctggagccatccccaatccccctttttggagtaaatttgcacaaaatcaaagaagtagcttcttctttcatctactcagcatcatccttgggtcgcatgaccactgttttgcagtttgcacaatcatctgcactctccactagttcacatgtcccctgcatcttctagccaggagcaatgtgttggagtcagcgacgctggccactgctggtcactggaccatgaggcggcggcactgctgcagttgaagcatcccggcactgtctaatcagaggcaaggaagggaggggtaattttggaagaagaatatgtgtgcctggcatttagaggggaagttgcagagaaagtggcatttcataaagctcatgtgtctatcgggtggcaattaattaactgacatctgttgagtggtaaatgttagagccacatctattgagttcacatggttaaattccccatttatttcctgtagaaaatgagggttccagtgataacaaggacaatactcagaaggttaatgcagagatgggcattgtagtggaggagattttagaggaagcacctaaatggaaggttttacgggtgagtgaccctgggtctgtttcctggtgttctttcaggcagcactcagcattaaatatgtgcttcatttgtaatggagaattctcctttaaatctagttggcggaaatttttgcttttgtgcccagctatttcttgtaaataatgtattgagaatatatatatgcaacccacccttttctgttcttttatcaactttccctgtacctaccaaataatacaggtaggttattattaatcaaggaaactccgtgcttgtccacaaattacgaataatgtgtaaactgatttactatacatatctttgcaggaactattgcaggagatagcagaagaacaggcaaagggagatggtgacaatgtaaaccctgttcatgaagacggaattaacgagagtggcatagttttggtagcatgcaaagatgagcgctcatgcgtgcagctgcaagaatgcatatcaaaaggctcgcatcaggtaacagttgaagtataatgtagttagcaacatagcatcaatcaacatcttaaatgcaagttttactttgatatatttaaaactaaaccatattaatccttcacacgcttccttgtttttaacaaggtcatgcgggccgagtgggagaagtacttgcttggcaaagctgaactgcatggattgcataggaagaacaagaaaacatctcagcaactaaaagggtttggtgttctggatggggaagttcctatgaggtctggtgagagtgcaggtcctgttagcattagcaaggttgaggctaatgccttacttgcggctgcctctgaaataagcactgtaactaaggaagcaaatcttgctgatgattcaaatgtcagctgcaagaagagatcattcggaaaagggaaagggaaagggaaatttaagaaaaccatggcaaagagagaagccagtaagttgagaaacagaaatactacagaacatactgatttggaagttgaaggtcaatcaggaaaaacagatgaacaggctgagactgatgcttgtaagttgtctgcagaagatgattctgcatcagctccagctgttgacaaagctgctaacaatttatctgcttttggagactctgtggataccgaaccactacctcctgtgcaattttacgccctagacagtgatcagcatgtacttgatgtatggaaaccttctgtaattatcgtttatcatccagatataacatttgttagagaaattgaagtatacaaggcagaaaatccatcgatgaagttaaaagtttactttcttttttatgaagattctgccgaggtacaaaaatttgagtccagcattcgccgggaaaatgaagcatttgaatctttgatcagacagaagtcgctgatgatgatacctgttgatcaggtggtgtaccactctgctaaaattcgttaaatcatcaaggattaatttcagcttgatccttgcgtaatgttcactagtatatgaatgcagacatactatgcttgattaaattactattacactttttatctaatctacatgtgaacctcatattgtacttatcttagctgtcagtcaaccttatgtgagcaaaagtgccggtgtgcacatggagaaaattccatatatttccctgatacatgaaagcacatctgtcttcttttcagaatggccgttgcattggaccaactcttgcaaatgaaccagaagctcttttatctcaaaattcactaacaagaaaggcaggtggtagaaagccactagagaaggagatgcaggtgatgcttccgtccattattttgactaaggaacaatattatttgcttttactggctgaattgctgagatgtttattgttgcatatccttctaggttattgtggacatgagagaattcatgagcagtcttcctaatgtattgcaccagaaaggtattcgaataatacctgttaccttggaagtcggtgactatgttctttctcctttgatctgtgtcgaacgaaaaagtattgcggacttgttccaaagctttgcttctggtcgtctctacaatcagattgaaaccatggttcggtattacaagatcccagtgcttctgatagaattctcacaagacaagagcttttcctttcaggtaccccctcgccctcctctgccatgcattttcttttcatgctactatttgccaatttggtaggatattcgttcttagatggatggtatcttgctccctacaaacagccatcccatgttgtctttcgatcttgagcaaattttaatccatttccgactatgtgctattttatattggttttcgtgttcaaaggtgctgaatggtctgtttatttttcagtctgcaagtgaaattggggatgatgtatctccgacaaatataatctcaaaactttcattactagtcctgcattttcctcggcttcgcatagtctggtctcgcagcttgcatgccacggcagatatattcctatcactcaaaacaaaccaggatgaacctgatgagagcaaggcaatgagagttggtgtgccctctgaggacggagttgtggagaatgacgtgaggtaagttgtttttttttgtatttggtaacggcataacgcacgcggaagcatacttatatctgatctactctcctcggtaaaatatgttttcgtcagggctgaaaattacaatacgtccgcgattgaattcttgaggaggcttcctggtgtgacagattcaaactatagaagaataatggaggaatgcaatagcttagcagagctggccctgcttccggtagagcggctgtctgagttgatgggtactcagaaaggggcacgcatgctcaaggaatttctcgatgccaagtgtccaactatgctctagggctgtgtaatcttgtttgtaattgttgaaaatgatcaataatgaacttattattctacttagtaaaaccgattttaagatgtggatggtgaagagtgatgaatgtacaacccttactagaaagcttgggtcactcggtcgc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055180.1 RefSeq:Os03g0100400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 3]]
 
[[Category:Chromosome 3]]
 

Latest revision as of 07:02, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information