|
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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0110200|
| |
| − | Description = Similar to mutator-like transposase [Oryza sativa (japonica cultivar-group)]|
| |
| − | Version = NM_001055248.2 GI:297600218 GeneID:4331351|
| |
| − | Length = 5746 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0110200, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| |
| − | AP = Chromosome 3:570646..576391|
| |
| − | CDS = 570646..571058,571150..571405,571492..571753,571857..572134,572235..572648<br>,572728..573094,573197..573341,573664..576391|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008396:570646..576391
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008396:570646..576391
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgtccagtaaacttatatttcaactataccatggtcaaggaaacgtccgttatgggccaactggggtagatctgtcagaatttattgtaacagcaaggggaattgataggccagccgagaggagtgtaccttctataaaaaaatggttgatgcggggcttgagagttgatccacagactagtgacattacaatctatgttgtagtaagtcgggcaacagagggtttttattgggaactaatgccggttcaaaactctgggatgtggagatggtatgtggagaatgcattgcaacgtgggtggcctctagctatggttccgtatgttcatccgaaggatccaagtgtacagatgaacatggatgatggcgaggggccaagtgcagaagtgaatgagattgaagtggatcaggtcaacgcaccagaggaagatggagtagctccagtagtagctccagtaggcatgcaacctggtggagtggctgacgagggggagactgtgggtgccattgtggacgaaatggaaaaagaggatagtgacaacgagcgtgtcgaggaagatgattcgtcagatgatgacgagaacaatattaatccagctgaatgggctagtgatgatttttctggtttggtcatctctgaaggggaaaatgtgagatgggagtacaaggaaaacgagattatcgagggagcgaggtatggtaatggagaagacatgaaggaggcggtgaagcattatgcagtgtcacttcatagggagttttgggttgccaagtctaaccggacacaatatgaagttaggtgtgttaatgaaaaagatgggtgtccgtggagagtgcacgcctataaggggaaatggaaggactactggacagtgtcggtcgttacgaaacatacttgttatctacctggtgttcaaaaataccacaggaacattacatgtgcatttgttgcatctgagatgtatgcgcatgtcgtggacaatctggcatatgaaccgaagtcaataatccgacatatcgaacagactttcaagtatacaattagctatgccaaggcgtggagggccaaacagaaaataatagagatgagatttggaacttatgaagcctcatatgacaatttgccacgtctgctatctgttatccaacaaagaaaccctgggacctcttgtgcactcaagacattcccctcaattgaacatcctggcaagactgtgctgcaaagagcgttcttagctctacatgcatgcaagatggcattcgtgcactgtcgtccagttctttgtattgatggcacatttttgaccgggaagtatcggggccagatactaacggcaattggggtagatgggaacaatcaggtattgccgttggcatttgcttttgtcgagagcgagaacaccgacagctggtactggttcctccatctggttaagacagaagttgttggtatgaggcccaatgtgtgtctaatacatgacaggcacgccggtatgcttcgagcgatagaagagttaaagtttgggactatggaaagaggataccctggccagtgggaagatgtacaaagcaggtggtgcatgcgtcatatgggagctaatttcttcaagcaatttaagaacaaggagttgatgaacatgttcaagaggctatgcaatcagaaccaggagaaaaaattcaatgagctttggaagagattagatgagttgacaggcaaatgtagtgaccagcgtgcaacaagaccagcggccgctgtacctgaccctcctcaagcactcggagctctcccaacagacagtgtaacattggttagaagaactggggagcaaattcgaaaattttctcagtggattgagaatgagccaaaagagaaatgggctaagacttatgacacaggtggtgctagatatggtataatgacaacaaatttggcggaagtttacaactgggtgatgcgcggtgtccgtggactcccactagttggtatagtggagttcattttacatgggacatgcaagtatttcagggagcggttccaagcagtttttccctctatgccgaacaacaacattttatttggaactttcatggagaaaaaactagcggagtggcgtgcaaaggccatgaaacatcgagctctagtgcaaggtacccaacaacacaggtttgaggtcctctgccaagacaaggcaggcaggggtatctaccgcaagagagtaaagcaggagtgcgttctcaaagacgacggcacatgtcactgctcctgtagaaagccgacgctgctccacaggccatgcacccatgtcatttccgcggcatctgagtgtggcatccaagatgcagtatatgtgtcacaatacttctccaagcaagcaatatatcacacatggagtggcgagatttttggcttcggtgtagctggggagttcacaaagattaacgatctgataatctatattcctgacccaacgaaactccgagacaaggcgggacggaggaagactcggcgcatccgcaacgatatggatgagtcggaggcaggcagggtgaagcggtgcagcaaatgcgatgaacgtggccacacctacaagtattgtcctaaagacaaggaaaaaccaagtgcggcggaggcaggtctatcaggatcagcagcagatggagctcgccctacgggtgaaggcactacttcaaggcgaccccgtcctagacgttctcgtggaacgaccgagatggcacatcctgagttgttggatccggcgatagatcagcgccaccggtcgtaccttactgcggtggagggggctcagcttgggacgttccgtccacggtcgtcacgtgagcgacttttggttcacgactccttcgtcgagaggttgcgtgaggccggtctcttaccgttggctcggctagttgaggccgcgaccggcgacgacgacgtgacgagacgttgggacccggacaggtccctcctagcagcgttggtcgaccggtggaggccggagacgcacacttttcacctgccgtgcggtgaggtagcccctaccctgcaggatgtctcttacttgttggggctaccgctcgcgggagacgctgtcgggccagttgacatgggtgtcgactggaaggacgagctgacggcacgtttcgcacccgtgcagcgcctaccaggtctaccgctcgagccgttgcagcagcaccgcaacaccgggcctacgaagaggtggctgcttcagttcactgttgaccagctaccggaggaggccgacgagtactccttcagccgttgtttggaggcgtacttgttgtggctttttgggtgggtgatgttctgtggtagtcacggacactcggtcgaccggggtctcgtgcactacgccaggagcatcgccgacgccgcggtcggtgaggtgcctcagtggagttggggctccgcgttgctggcggctcagtaccgtggcctctgcgaggcttgtaccaggacggaccctggcgcgatcttcggtgggtgccctctcttcatttctctttgggcggctgagaggattgcgatcggccgcccccttgtggagcaccacccttacgacgcgtcgctgtacgagaacagaccggcggtcgactacccaacgatgggtactctgtggtgccggcgtcaggttaggcggtcgtacgcggagtttgtgatggagttcgaccgccttctgccgacggacgtagtgtgggagccctacagtgccttgcttacccacagtcgggcgccgctaggcctgtccacactctgcacgagggaccaggcgtactggatgactacggttccgatggtgttcgacatctgtgtcgagccgcacgcaccttaccgcgtgatgcggcagttcggcttccgtcagtcctttccagtcccgtttccggcgggcgtcacggctgccgttcaccggtactcgcgcaagggtcagcactcagctggtcactggcctgccaagttggggccttttctcgacgactggttgcttgctaccgaggaggtcgtggaccacgcgggagagccacacacggaggaggggtatgaggcgtacctacgttggtatcagccacgcacccgtactagagtcacctacgctccgacggagcaacaggcccacgccgcgagcgccagagacctctacgccaggcaccgcgaccaggacttcgctcgtgcggccgttgagtgcaacagggtcgtcgttgatgctacaacggcgatccaacggttaggcgcggggattgaggtgggggcagacgagcacctgtcgacgtacacgcggatacgggactcgatgcgctcggttctccgtgcgctgacctgtcgtgctgccgacgttgctcaggcagacgcagcaccacaggtgcgtccccgaccgactgctcctcgtccagctgcgcacgttcctacgccgacaccccctcccttcggaggcttcgctcagcctgggacgacgccgggcgcccactcctggcaggctgcggggtcatcgtcacaggcaggtgtgtcggcctcgctgtctgcgcagttctggcaggacgccgggacttcgtcacagccgcccggcacgtcttggcagggtcctaccgggacttcgtccgagcacgggtgggcttccgccacgcacttcgacattagtgacttcgacttcccggacattatcggtccctcacagcttggaggcgcaccgccggtgcacacgcaggagcagtcgccctccaccccactcccagaccctcgcgctacccgtgctgtcccaccggatcgcttcacgtactcccaggaccacgtgcgagcacaggcccggaggaccaagcggggtcgcggcgcgagtcacggccagtag</cdnaseq>|
| |
| − | AA = <aaseq>MSSKLIFQLYHGQGNVRYGPTGVDLSEFIVTARGIDRPAERSVP SIKKWLMRGLRVDPQTSDITIYVVVSRATEGFYWELMPVQNSGMWRWYVENALQRGWP LAMVPYVHPKDPSVQMNMDDGEGPSAEVNEIEVDQVNAPEEDGVAPVVAPVGMQPGGV ADEGETVGAIVDEMEKEDSDNERVEEDDSSDDDENNINPAEWASDDFSGLVISEGENV RWEYKENEIIEGARYGNGEDMKEAVKHYAVSLHREFWVAKSNRTQYEVRCVNEKDGCP WRVHAYKGKWKDYWTVSVVTKHTCYLPGVQKYHRNITCAFVASEMYAHVVDNLAYEPK SIIRHIEQTFKYTISYAKAWRAKQKIIEMRFGTYEASYDNLPRLLSVIQQRNPGTSCA LKTFPSIEHPGKTVLQRAFLALHACKMAFVHCRPVLCIDGTFLTGKYRGQILTAIGVD GNNQVLPLAFAFVESENTDSWYWFLHLVKTEVVGMRPNVCLIHDRHAGMLRAIEELKF GTMERGYPGQWEDVQSRWCMRHMGANFFKQFKNKELMNMFKRLCNQNQEKKFNELWKR LDELTGKCSDQRATRPAAAVPDPPQALGALPTDSVTLVRRTGEQIRKFSQWIENEPKE KWAKTYDTGGARYGIMTTNLAEVYNWVMRGVRGLPLVGIVEFILHGTCKYFRERFQAV FPSMPNNNILFGTFMEKKLAEWRAKAMKHRALVQGTQQHRFEVLCQDKAGRGIYRKRV KQECVLKDDGTCHCSCRKPTLLHRPCTHVISAASECGIQDAVYVSQYFSKQAIYHTWS GEIFGFGVAGEFTKINDLIIYIPDPTKLRDKAGRRKTRRIRNDMDESEAGRVKRCSKC DERGHTYKYCPKDKEKPSAAEAGLSGSAADGARPTGEGTTSRRPRPRRSRGTTEMAHP ELLDPAIDQRHRSYLTAVEGAQLGTFRPRSSRERLLVHDSFVERLREAGLLPLARLVE AATGDDDVTRRWDPDRSLLAALVDRWRPETHTFHLPCGEVAPTLQDVSYLLGLPLAGD AVGPVDMGVDWKDELTARFAPVQRLPGLPLEPLQQHRNTGPTKRWLLQFTVDQLPEEA DEYSFSRCLEAYLLWLFGWVMFCGSHGHSVDRGLVHYARSIADAAVGEVPQWSWGSAL LAAQYRGLCEACTRTDPGAIFGGCPLFISLWAAERIAIGRPLVEHHPYDASLYENRPA VDYPTMGTLWCRRQVRRSYAEFVMEFDRLLPTDVVWEPYSALLTHSRAPLGLSTLCTR DQAYWMTTVPMVFDICVEPHAPYRVMRQFGFRQSFPVPFPAGVTAAVHRYSRKGQHSA GHWPAKLGPFLDDWLLATEEVVDHAGEPHTEEGYEAYLRWYQPRTRTRVTYAPTEQQA HAASARDLYARHRDQDFARAAVECNRVVVDATTAIQRLGAGIEVGADEHLSTYTRIRD SMRSVLRALTCRAADVAQADAAPQVRPRPTAPRPAAHVPTPTPPPFGGFAQPGTTPGA HSWQAAGSSSQAGVSASLSAQFWQDAGTSSQPPGTSWQGPTGTSSEHGWASATHFDIS DFDFPDIIGPSQLGGAPPVHTQEQSPSTPLPDPRATRAVPPDRFTYSQDHVRAQARRT KRGRGASHGQ</aaseq>|
| |
| − | DNA = <dnaseqindica>5334..5746#4987..5242#4639..4900#4258..4535#3744..4157#3298..3664#3051..3195#1..2728#atgtccagtaaacttatatttcaactataccatggtcaaggaaacgtccgttatgggccaactggggtagatctgtcagaatttattgtaacagcaaggggaattgataggccagccgagaggagtgtaccttctataaaaaaatggttgatgcggggcttgagagttgatccacagactagtgacattacaatctatgttgtagtaagtcgggcaacagagggtttttattgggaactaatgccggttcaaaactctgggatgtggagatggtatgtggagaatgcattgcaacgtgggtggcctctagctatggttccgtatgttcatccgaaggatccaagtgtacagatgaacatggatgatggcgaggggccaagtgcagaagtgaatgagattgaagtggatcaggtcaacgcaccagaggaagatggagtagctccagtagtagctccagtaggcatgcaacctggtggagtggctgacgagggggagactgtgggtgccattgtggacgaaatggaaaaagaggatagtgacaacgagcgtgtcgaggaagatgattcgtcagatgatgacgagaacaatattaatccagctgaatgggctagtgatgatttttctggtttggtcatctctgaaggggaaaatgtgagatgggagtacaaggaaaacgagattatcgagggagcgaggtatggtaatggagaagacatgaaggaggcggtgaagcattatgcagtgtcacttcatagggagttttgggttgccaagtctaaccggacacaatatgaagttaggtgtgttaatgaaaaagatgggtgtccgtggagagtgcacgcctataaggggaaatggaaggactactggacagtgtcggtcgttacgaaacatacttgttatctacctggtgttcaaaaataccacaggaacattacatgtgcatttgttgcatctgagatgtatgcgcatgtcgtggacaatctggcatatgaaccgaagtcaataatccgacatatcgaacagactttcaagtatacaattagctatgccaaggcgtggagggccaaacagaaaataatagagatgagatttggaacttatgaagcctcatatgacaatttgccacgtctgctatctgttatccaacaaagaaaccctgggacctcttgtgcactcaagacattcccctcaattgaacatcctggcaagactgtgctgcaaagagcgttcttagctctacatgcatgcaagatggcattcgtgcactgtcgtccagttctttgtattgatggcacatttttgaccgggaagtatcggggccagatactaacggcaattggggtagatgggaacaatcaggtattgccgttggcatttgcttttgtcgagagcgagaacaccgacagctggtactggttcctccatctggttaagacagaagttgttggtatgaggcccaatgtgtgtctaatacatgacaggcacgccggtatgcttcgagcgatagaagagttaaagtttgggactatggaaagaggataccctggccagtgggaagatgtacaaagcaggtggtgcatgcgtcatatgggagctaatttcttcaagcaatttaagaacaaggagttgatgaacatgttcaagaggctatgcaatcagaaccaggagaaaaaattcaatgagctttggaagagattagatgagttgacaggcaaatgtagtgaccagcgtgcaacaagaccagcggccgctgtacctgaccctcctcaagcactcggagctctcccaacagacagtgtaacattggttagaagaactggggagcaaattcgaaaattttctcagtggattgagaatgagccaaaagagaaatgggctaagacttatgacacaggtggtgctagatatggtataatgacaacaaatttggcggaagtttacaactgggtgatgcgcggtgtccgtggactcccactagttggtatagtggagttcattttacatgggacatgcaagtatttcagggagcggttccaagcagtttttccctctatgccgaacaacaacattttatttggaactttcatggagaaaaaactagcggagtggcgtgcaaaggccatgaaacatcgagctctagtgcaaggtacccaacaacacaggtttgaggtcctctgccaagacaaggcaggcaggggtatctaccgcaagagagtaaagcaggagtgcgttctcaaagacgacggcacatgtcactgctcctgtagaaagccgacgctgctccacaggccatgcacccatgtcatttccgcggcatctgagtgtggcatccaagatgcagtatatgtgtcacaatacttctccaagcaagcaatatatcacacatggagtggcgagatttttggcttcggtgtagctggggagttcacaaagattaacgatctgataatctatattcctgacccaacgaaactccgagacaaggcgggacggaggaagactcggcgcatccgcaacgatatggatgagtcggaggcaggcagggtgaagcggtgcagcaaatgcgatgaacgtggccacacctacaagtattgtcctaaagacaaggaaaaaccaagtgcggcggaggcaggtctatcaggatcagcagcagatggagctcgccctacgggtgaaggcactacttcaaggcgaccccgtcctagacgttctcgtggaacgaccggttacgtggtgtagttcgtgtgttgtatgttggcaaaaggctttgcttgtaatttcgttcgaacttatcgatatgttcgcattgtgttgtgttgcgaaccacttgttagacttccgcatgtaatgtctttatgttttacggcttgtaattttgttttatgttatttcattctcgttacgtgcctttgtgtaacgaaagttatgttctcaataatctgcactcttgcatgtctctataagtattcttccgtttcagataacttgtttttacaattatattattaccttcttatttaccctaacatgtaacacgttacttgcagagatggcacatcctgagttgttggatccggcgatagatcagcgccaccggtcgtaccttactgcggtggagggggctcagcttgggacgttccgtccacggtcgtcacgtgagcgacttttggttcacgactccttcgtcgagaggtatggttgtactgtgttcacgacaccgggcttaccttactacggtggagggggcttagcaatgtgttcattttaacgtctggtattatttcgctttcgcaggttgcgtgaggccggtctcttaccgttggctcggctagttgaggccgcgaccggcgacgacgacgtgacgagacgttgggacccggacaggtccctcctagcagcgttggtcgaccggtggaggccggagacgcacacttttcacctgccgtgcggtgaggtagcccctaccctgcaggatgtctcttacttgttggggctaccgctcgcgggagacgctgtcgggccagttgacatgggtgtcgactggaaggacgagctgacggcacgtttcgcacccgtgcagcgcctaccaggtctaccgctcgagccgttgcagcagcaccgcaacaccgggcctacgaagaggtggctgcttcagttcactgtaagttctttctacctaaactgacgtgtattatgtacgtaacttgtaaagtgcctaacatttcatccaacgcttgcaggttgaccagctaccggaggaggccgacgagtactccttcagccgttgtttggaggcgtacttgttgtggctttttgggtgggtgatgttctgtggtagtcacggacactcggtcgaccggggtctcgtgcactacgccaggagcatcgccgacgccgcggtcggtgaggtgcctcagtggagttggggctccgcgttgctggcggctcagtaccgtggcctctgcgaggcttgtaccaggacggaccctggcgcgatcttcggtgggtgccctctcttcatttctctttgggcggctgagaggattgcgatcggccgcccccttgtggagcaccacccttacgacgcgtcgctgtacgagaacagaccggcggtcgactacccaacgatgggtactctgtggtgccggcgtcaggtacgtcgctagtatttggtaatgttgtcctactattgttaacttcatcctacgtcacactgaccttattgtattgcagcgccgatgggctcacgtgcaggttaggcggtcgtacgcggagtttgtgatggagttcgaccgccttctgccgacggacgtagtgtgggagccctacagtgccttgcttacccacagtcgggcgccgctaggcctgtccacactctgcacgagggaccaggcgtactggatgactacggttccgatggtgttcgacatctgtgtcgagccgcacgcaccttaccgcgtgatgcggcagttcggcttccgtcagtcctttccagtcccgtttccggcgggcgtcacggctgccgttcaccggtaagccgttttactacgatttaatatgttgcattaacatcgggctgtccataataatttgctttgtttgtcgtttgccctaatacaatacattaatttgcaggtactcgcgcaagggtcagcactcagctggtcactggcctgccaagttggggccttttctcgacgactggttgcttgctaccgaggaggtcgtggaccacgcgggagagccacacacggaggaggggtatgaggcgtacctacgttggtatcagccacgcacccgtactagagtcacctacgctccgacggagcaacaggcccacgccgcgagcgccagagacctctacgccaggcaccgcgaccaggacttcgctcgtgcggtgagtaccttgcatcgcaccatcgtctcatcatcctttctgttggacaaaggctacgaatatttacgttgtaattaaccgtgcaggccgttgagtgcaacagggtcgtcgttgatgctacaacggcgatccaacggttaggcgcggggattgaggtgggggcagacgagcacctgtcgacgtacacgcggatacgggactcgatgcgctcggttctccgtgcgctgacctgtcgtgctgccgacgttgctcaggcagacgcagcaccacaggtgcgtccccgaccgactgctcctcgtccagctgcgcacgttcctacgccgacaccccctcccttcggaggtacgtatattcaaggtctatttgtacatcatcaatcaattgatactcaatttatgtgtaagcttacaagtgtcgcgtcgtcgatgtgtaggcttcgctcagcctgggacgacgccgggcgcccactcctggcaggctgcggggtcatcgtcacaggcaggtgtgtcggcctcgctgtctgcgcagttctggcaggacgccgggacttcgtcacagccgcccggcacgtcttggcagggtcctaccgggacttcgtccgagcacgggtgggcttccgccacgcacttcgacattagtgacttcgacttcccggacattatcggtccctcacagcttggaggcgcaccgccggtgcacacgcaggagcagtcgccctccaccccactcccagaccctcgcgctacccgtgctgtcccaccggatcgcttcacgtactcccaggaccacgtgcgagcacaggcccggaggaccaagcggggtcgcggcgcgagtcacggccagtag</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055248.2 RefSeq:Os03g0110200]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
| |
| − | [[Category:Chromosome 3]]
| |
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Annotated Information
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Structured Information
