|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0136900|
| |
| − | Description = Similar to Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)|
| |
| − | Version = NM_001055433.1 GI:115450594 GeneID:4331547|
| |
| − | Length = 6676 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0136900, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| |
| − | AP = Chromosome 3:2005167..2011842|
| |
| − | CDS = 2005409..2005477,2005571..2005813,2005895..2005993,2006101..2006580,2006693..2006791<br>,2006984..2007105,2007183..2007301,2007379..2007446,2007719..2007904<br>,2008210..2008285,2008364..2008443,2008525..2008581,2008658..2008800<br>,2008875..2009019,2009388..2009549,2009646..2009831,2010160..2010252<br>,2010780..2010940,2011327..2011434,2011551..2011815|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008396:2005167..2011842
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008396:2005167..2011842
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgcctcccctcacgagcgccctcctctcccgctcctcctctacccgcatccccgccgcggcggcggcggcggcggcgatctcgaatcccgcgggcgccgccgcgtcgtcgtcgtcgccgtcaccgccgcctccgagctctcgccccaggccggcgtcccccttcgcgtccggcctcgctggccgcatcttcggcggccgccgcgccgccgcgcgctcctcgtcgtccgccgcggccgtcttcgagcggcgcttcgcctcggcggcggcgaagaactcgtacgatgaaatcctgacgggcctcgcgaagccgggaggcggagcggagttcgggaaatactacagcctgcccgcgctatccgatccgcggatcgagcgactcccttactcgataaggattcttctcgagtcggcaatcagaaactgtgatgagttccaggtcaccgggaaggacgttgagaaaatcctggactgggagaacagcgcaccaaagcaagtcgaaatcccatttaagccagcccgtgtcctcctccaggatttcactggtgttccagcagtggttgatcttgcgtgcatgagggatgctatgagcaaacttggcagtgacccaaacaaaattaatcctctggtacctgtagatcttgttattgatcattcagtacaagttgatgtggcaagatcagaaaatgctgttcaggcaaatatggagctagagttccatcgtaacaaggagaggtttggatttttgaaatggggttcaactgctttccgtaacatgcttgttgttccacctggatctggaattgtgcatcaggttaaccttgaatatctggccagagttgtgtttaacaatggtgggatcctttaccctgatagtgttgttggaacagactcccacacaactatgatagatggtcttggtgttgctggatggggagttggtggtatagaggcagaagctacaatgcttggccagccaatgagcatggtattgccaggagttgtgggcttcaagttaacagggaagctgaggaacggtgttactgctacagatttggttctaacagtaactcaaatgcttaggaaacatggcgttgtcggaaaatttgttgaattttacgggggaggcatgagtgaattatcactggctgatagggctacaattgcaaacatgtcaccagaatatggtgcaactatgggtttcttcccagttgatggaaagacattggactacttgaagctaactggcagaagtgatgacactgtggccatgatagagtcttacctgcgtgccaataagatgttcgtcgactacaaccagcctgaagctgaaagagtgtactcatcttatctggaacttaacttggaggaggtagagccatgcttgtctggaccaaaacggcctcatgaccgagtgactttgaagaacatgaaatcagattggctgtcttgcttggataatgatgtaggcttcaagggttttgctgtccccaaagaatcacagggtaaagttgctgagttctctttccatgggacaccagcaaagctaaagcatggtgatgttgtaattgctgctataaccagttgcaccaacacatcaaatcctaatgtaatgctgggagctgctttagttgccaaaaaggcttgtgaattaggccttgaggtcaagccatggattaagacaagtcttgcacctggttctggagttgtgaagaagtacttggacaagagtggtctgcagaaatatctagaccagcttggcttccatattgtaggctatggttgcacaacctgcataggaaattctggagaacttgatgaaacagtatctgctgcaatttctgacaacgatattgtcgctgctgccgtgttatctggaaacagaaattttgaagggcgtgtgcacgcattaaccagagcaaattatcttgcctctcctccattggttgtggcctatgcccttgctggcacggtcaatattgattttgagaaagaaccaattggcatctcgaaagatgggaaggaggtttacttcagggacatctggccttccactgaagagattgctgaggttgttaaatcaagtgtgctacctgacatgtttaagagcacatacgaggcaataaccaaaggaaatcctatgtggaatgagctgtctgtatcagcaagcactctctacccatgggacccgacatctacttacatccatgagcctccttatttcaaggatatgacaatgtcccctcctggcccacggcctgtgaaggatgcttactgtctcctgaactttggtgacagtatcacaactgatcacatctcacctgccggaagtattcaccctgacagccctgctgctagatatctgaaggagcgtggtgttgaaaggaaggacttcaactcatatggcagtcggcgaggaaatgatgagatcatggctaggggaacttttgccaacattcgccttgtgaacaagttcttgaagggtgaggttggcccaaaaaccatccatattccatcaggggagaagctctctgttttcgacgctgctacgaaatacaagaatgaaggacatgacactattatcctggctggtgctgagtacggtagtggaagctctcgggattgggctgcgaagggtccaatgctacagggagtcaaggctgtgattgctaagagctttgaaaggattcaccgcagcaaccttgctggtatgggtatcattcctctatgcttcaagtcaggggaggacgccgacacccttggattgactggccatgagcgtttcacggttcacctcccggccaatgtaagtgagatcaagcctgggcaagatgttactgtgacgactgataatgggaagtccttcacttgcacacttcgatttgacactgaggtggagcttgcatactacgacaatggtggcattttaccgtatgtcatcagaaagatcgccgagcagtag</cdnaseq>|
| |
| − | AA = <aaseq>MPPLTSALLSRSSSTRIPAAAAAAAAISNPAGAAASSSSPSPPP PSSRPRPASPFASGLAGRIFGGRRAAARSSSSAAAVFERRFASAAAKNSYDEILTGLA KPGGGAEFGKYYSLPALSDPRIERLPYSIRILLESAIRNCDEFQVTGKDVEKILDWEN SAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMSKLGSDPNKINPLVPVDLVIDH SVQVDVARSENAVQANMELEFHRNKERFGFLKWGSTAFRNMLVVPPGSGIVHQVNLEY LARVVFNNGGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMSMVLPGV VGFKLTGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGGGMSELSLADRATIANMS PEYGATMGFFPVDGKTLDYLKLTGRSDDTVAMIESYLRANKMFVDYNQPEAERVYSSY LELNLEEVEPCLSGPKRPHDRVTLKNMKSDWLSCLDNDVGFKGFAVPKESQGKVAEFS FHGTPAKLKHGDVVIAAITSCTNTSNPNVMLGAALVAKKACELGLEVKPWIKTSLAPG SGVVKKYLDKSGLQKYLDQLGFHIVGYGCTTCIGNSGELDETVSAAISDNDIVAAAVL SGNRNFEGRVHALTRANYLASPPLVVAYALAGTVNIDFEKEPIGISKDGKEVYFRDIW PSTEEIAEVVKSSVLPDMFKSTYEAITKGNPMWNELSVSASTLYPWDPTSTYIHEPPY FKDMTMSPPGPRPVKDAYCLLNFGDSITTDHISPAGSIHPDSPAARYLKERGVERKDF NSYGSRRGNDEIMARGTFANIRLVNKFLKGEVGPKTIHIPSGEKLSVFDAATKYKNEG HDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFERIHRSNLAGMGIIPLCFKSG EDADTLGLTGHERFTVHLPANVSEIKPGQDVTVTTDNGKSFTCTLRFDTEVELAYYDN GGILPYVIRKIAEQ</aaseq>|
| |
| − | DNA = <dnaseqindica>6366..6434#6030..6272#5850..5948#5263..5742#5052..5150#4738..4859#4542..4660#4397..4464#3939..4124#3558..3633#3400..3479#3262..3318#3043..3185#2824..2968#2294..2455#2012..2197#1591..1683#903..1063#409..516#28..292#ctcctccgcttcgcagaccagccagccatgcctcccctcacgagcgccctcctctcccgctcctcctctacccgcatccccgccgcggcggcggcggcggcggcgatctcgaatcccgcgggcgccgccgcgtcgtcgtcgtcgccgtcaccgccgcctccgagctctcgccccaggccggcgtcccccttcgcgtccggcctcgctggccgcatcttcggcggccgccgcgccgccgcgcgctcctcgtcgtccgccgcggccgtcttcgagcggcgcttcgcctcggcgggtaagggggggggggggggggctaacgacctggtgggtgggggatgggatgggggctggctgtatgtgattatctctctgatggtttatctgcttttttctgtttgttttgggcagcggcgaagaactcgtacgatgaaatcctgacgggcctcgcgaagccgggaggcggagcggagttcgggaaatactacagcctgcccgcgctatccgatccgcggatcggtgagtgttttgatgccttccagtattgttggacgccccgatccactatttggtgttggatgtgtgtttttttttgtttgattgttagttcgtgatggttgaattgggcattcaacgaggggttgacgctttcatctctttcggtcggtcaatcgtttgtgaagatttgaattggacgaattgtttggttttgttcgagggctctgacctccggttagagcgtaatgtggttgtgaaattggaggtttagatgtgttcagaccaaggaattttgatgcatttgtgctttccttatatagaatttcctttgaaggttttgatctacctctgctgccgaattattagaacaacgatgatttgatccatgttttggtggttttgatcagagcgactcccttactcgataaggattcttctcgagtcggcaatcagaaactgtgatgagttccaggtcaccgggaaggacgttgagaaaatcctggactgggagaacagcgcaccaaagcaagtcgaaatcccatttaagccagcccgtgtcctcctccaggtactaatcctggcaccgtctcatgctttttgatctactttgttcgattgctgttgatagaataattgtgagctggaaaagtttcagtcaatagcctttgatgacaggaatattggaactgtagttcccactttcttacgaacctatcctttcaaggaagtggagttgcacatggcttatcttttgttcgtttttctgatctatgattgctactgtatgtaatgttgtttaatgatagatatggaaacaacaaggcagaaggtgctggtggctgtacaaaattacctgcatctccatattatattcttattctctagacaacaatgaaagtcaatcattctattttagtctggcatgtggctagtgatagctggatatattgcttattatttatatctgatgtcacattttctgatgatgtgtcgatgcaaatgtgttctgctttctcagttgttgtaactgagttgttgaagctaccttgatgatgactcagccagctaaccttttacctgatttacacattacaggatttcactggtgttccagcagtggttgatcttgcgtgcatgagggatgctatgagcaaacttggcagtgacccaaacaaaattaatcctctggtgagtccatagtcaaatgcatacaattacaaaattactaccctctcattgtgcaacttatccatcacccatcggtatgttacccttgatacgtgatttacaataaccaagcttgtttcatttattgttagttgataccctactttggacctttcctgctctattaagctgtgtatttaagcacggttctgatcatctccttacatgtagctatctgtatatacggattatattgggctacatgcatatgtggtataaattggaaaatggtgcttgtgcttttgctgacattactggatgtgcctttctccatttatttcgtttgcaggtacctgtagatcttgttattgatcattcagtacaagttgatgtggcaagatcagaaaatgctgttcaggcaaatatggagctagagttccatcgtaacaaggagaggtttggatttttgaaatggggttcaactgctttccgtaacatgcttgttgttccacctggatctggaattgtgcatcaggtatatcaagaaacaatcattctgatatttttctcaaatatttcacctttgttatataaccacagtaaacactaaccacatgtttttttttgttaggttaaccttgaatatctggccagagttgtgtttaacaatggtgggatcctttaccctgatagtgttgttggaacagactcccacacaactatgatagatggtcttggtgttgctggatggggagttggtggtatagaggcagaagctacaatgcttggccaggtgaaaaaaaattctatggctaataaattttcatctctgatactatggttgcaatgaattacagagtttgtatcaggatgttatttttctctttagcataacaaaagaaaagggtggttgggtttattcgacttctacctctttatcacacaacacacattcagcttgccacacgttttgtgtttggtcatggctcaccaaattcttattctttgattgtaaattttaacgtatgcctgcatcaacatgtcatgcaccaaaaccccaacagtatgtaaataagcttgaaccttggggggtggctgcttctgtccatttgattgcccacttatgcctattttctgttctaaatgcgctactttctgcagccaatgagcatggtattgccaggagttgtgggcttcaagttaacagggaagctgaggaacggtgttactgctacagatttggttctaacagtaactcaaatgcttaggaaacatggcgttgtcggaaaatttgttgaattttacggtattcgccttgcatatctttaatacatgtctctttcttttgatagcaagtctaatgctagttctcaattccagggggaggcatgagtgaattatcactggctgatagggctacaattgcaaacatgtcaccagaatatggtgcaactatgggtttcttcccagttgatggaaagacattggactacttgaagctaactggcagaagtgatgacactgtaagttataggcagttatcttattggatttgatcctaagtgtacttgtatagttctaatatatttgtgaatttaggtggccatgatagagtcttacctgcgtgccaataagatgttcgtcgactacaaccaggtgattttcatattatatctgaagagcatattatttggcaaatactttttttctttattgatgccctttttcttaatgtagcctgaagctgaaagagtgtactcatcttatctggaacttaacttggaggaggtagagccatgcttgtctggaccaaaacggtaatgtacttgattaattcataatcttggcacatgtttagccacattcagttataaactgaagaacccactgcacaggcctcatgaccgagtgactttgaagaacatgaaatcagattggctgtcttgcttggataatgatgtaggcttcaaggtaaagatctactgtacagataactacataactcttcaactggtgttgttgtgatgttctgacttttgttgtttatttgctgatattaaatggcattccaaatcctcatttaagttgcttaatcttggatcacatttgggatatattcatacattatgataaacaaattattttttagtgaaagatgaacaaaatggggccccatatttctatgttctgctattgcacagaatacatctttggtttatacattgtcctgttatcttttccattttcatcctatcctcactacgatcattttgcagggttttgctgtccccaaagaatcacagggtaaagttgctgagttctctttccatgggacaccagcaaagctaaagcatggtgatgttgtaattgctgctataaccagttgcaccaacacatcaaatcctaatgtaatgctgggagctgctttagttgccaaaaaggcttgtgaattaggccttgaggtgaagccctttaccttgtttccagcttgacatccttgtttaatttatctcaagtatgcatatgtgttttaaataaacaaaaaaaatcatctctatcagttcatttatgctcgatatattgtattcctattgagatggatcaatcattgtcccttatcatcctattccattttcctgttattgtcaatgaaatgtaattgcagtgagttattttgttcttcctgagttctgaaaaatgcaagtactactttaatatttatttttatcatcaggtcaagccatggattaagacaagtcttgcacctggttctggagttgtgaagaagtacttggacaagaggtaggtgattgttccttgaattcaaagtttcttgtttttgtcagccttagttattctcactttgtatttccttgcagtggtctgcagaaatatctagaccagcttggcttccatattgtaggctatggttgcacaacctgcataggaaattctggagaacttgatgaaacagtatctgctgcaatttctgacaacggtgagtttgacatcattagctaagaaagtgtgtagagttgagaagctcgctacttacttttctctcttactttttagatattgtcgctgctgccgtgttatctggaaacagaaattttgaagggcgtgtgcacgcattaaccagagcaaattatcttgcctctcctccattggttgtggcctatgcccttgctggcacggtaagataacagattttgtttgacatatgcctgtaatttcaaactaaacagttaaattactgtactattatagcaatatactcaagaatcaaatcaaagatgtgattggtaatatgtaagctagctttttatacatcaatgactgcatgtcaaaagttctgcccattttctaaactgccagatatgccacaggtcaatattgattttgagaaagaaccaattggcatctcgaaagatgggaaggaggtttacttcagggacatctggccttccactgaagagattgctgaggttagcactgcagttttgtccgcttcccttttttcatataaatctatacttgcctattgaaaacatagtggattccataagtgcttcatgctggtgcttttaattttggtaggttgttaaatcaagtgtgctacctgacatgtttaagagcacatacgaggcaataaccaaaggaaatcctatgtggaatgagctgtctgtatcagcaagcactctctacccatgggacccgacatctacttacatccatgagcctccttatttcaaggatatgacaatgtcccctcctggcccacggcctgtgaaggatgcttactgtctcctgaactttggtgacagtatcacaactgatcacatctcacctgccggaagtattcaccctgacagccctgctgctagatatctgaaggagcgtggtgttgaaaggaaggacttcaactcatatggcagtcggcgaggaaatgatgagatcatggctaggggaacttttgccaacattcgccttgtgaacaagttcttgaagggtgaggttggcccaaaaaccatccatattccatcaggggagaagctctctgttttcgacgctgctacggtaatatacttgcacttaaaatccaaatttacatttcatttatgcaaatatatattgtactaatgcattctgaaatttacttatccatttttatgttcttaccacagaaatacaagaatgaaggacatgacactattatcctggctggtgctgagtacggtagtggaagctctcgggattgggctgcgaagggtccaatgctacaggtaacttcgattccatcacaatttcttcagcaaaggccattaatttcttactaatgggtgtacttcgatttggtgatacagggagtcaaggctgtgattgctaagagctttgaaaggattcaccgcagcaaccttgctggtatgggtatcattcctctatgcttcaagtcaggggaggacgccgacacccttggattgactggccatgagcgtttcacggttcacctcccggccaatgtaagtgagatcaagcctgggcaagatgttactgtgacgactgataatgggaagtccttcacttgcacacttcgatttgacactgaggtatgatcattcgtcatcaatgatttcattagagtgttgggtgctgattgtgtatgttgccgatgttgatggatttgttaattttttgtccaggtggagcttgcatactacgacaatggtggcattttaccgtatgtcatcagaaagatcgccgagcagtaggatgaacgctcaagaagattgcgatgaggcgaatcgtaattgttgtaaacagcttgattagcgcaaccccattttttaggaatacctttcaaataaccttctgagatatccgcgaagaactcagaaattttgtgagctactacacttgcagttgtacgctgccacgggaaatgcggcgctaaatgacgctatgtgaacattaacattttcacttaaacacacgttgctaataattttccggc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055433.1 RefSeq:Os03g0136900]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
| |
| − | [[Category:Chromosome 3]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
