Difference between revisions of "Os03g0136900"

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(Created page with "{{JaponicaGene| GeneName = Os03g0136900| Description = Similar to Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)| Version = NM_001055433.1 ...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os03g0136900|
 
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Description = Similar to Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)|
 
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Version = NM_001055433.1 GI:115450594 GeneID:4331547|
 
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Length = 6676 bp|
 
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Definition = Oryza sativa Japonica Group Os03g0136900, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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Please input expression information here.
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AP = Chromosome 3:2005167..2011842|
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CDS = 2005409..2005477,2005571..2005813,2005895..2005993,2006101..2006580,2006693..2006791<br>,2006984..2007105,2007183..2007301,2007379..2007446,2007719..2007904<br>,2008210..2008285,2008364..2008443,2008525..2008581,2008658..2008800<br>,2008875..2009019,2009388..2009549,2009646..2009831,2010160..2010252<br>,2010780..2010940,2011327..2011434,2011551..2011815|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008396:2005167..2011842
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source=RiceChromosome03
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008396:2005167..2011842
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source=RiceChromosome03
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgcctcccctcacgagcgccctcctctcccgctcctcctctacccgcatccccgccgcggcggcggcggcggcggcgatctcgaatcccgcgggcgccgccgcgtcgtcgtcgtcgccgtcaccgccgcctccgagctctcgccccaggccggcgtcccccttcgcgtccggcctcgctggccgcatcttcggcggccgccgcgccgccgcgcgctcctcgtcgtccgccgcggccgtcttcgagcggcgcttcgcctcggcggcggcgaagaactcgtacgatgaaatcctgacgggcctcgcgaagccgggaggcggagcggagttcgggaaatactacagcctgcccgcgctatccgatccgcggatcgagcgactcccttactcgataaggattcttctcgagtcggcaatcagaaactgtgatgagttccaggtcaccgggaaggacgttgagaaaatcctggactgggagaacagcgcaccaaagcaagtcgaaatcccatttaagccagcccgtgtcctcctccaggatttcactggtgttccagcagtggttgatcttgcgtgcatgagggatgctatgagcaaacttggcagtgacccaaacaaaattaatcctctggtacctgtagatcttgttattgatcattcagtacaagttgatgtggcaagatcagaaaatgctgttcaggcaaatatggagctagagttccatcgtaacaaggagaggtttggatttttgaaatggggttcaactgctttccgtaacatgcttgttgttccacctggatctggaattgtgcatcaggttaaccttgaatatctggccagagttgtgtttaacaatggtgggatcctttaccctgatagtgttgttggaacagactcccacacaactatgatagatggtcttggtgttgctggatggggagttggtggtatagaggcagaagctacaatgcttggccagccaatgagcatggtattgccaggagttgtgggcttcaagttaacagggaagctgaggaacggtgttactgctacagatttggttctaacagtaactcaaatgcttaggaaacatggcgttgtcggaaaatttgttgaattttacgggggaggcatgagtgaattatcactggctgatagggctacaattgcaaacatgtcaccagaatatggtgcaactatgggtttcttcccagttgatggaaagacattggactacttgaagctaactggcagaagtgatgacactgtggccatgatagagtcttacctgcgtgccaataagatgttcgtcgactacaaccagcctgaagctgaaagagtgtactcatcttatctggaacttaacttggaggaggtagagccatgcttgtctggaccaaaacggcctcatgaccgagtgactttgaagaacatgaaatcagattggctgtcttgcttggataatgatgtaggcttcaagggttttgctgtccccaaagaatcacagggtaaagttgctgagttctctttccatgggacaccagcaaagctaaagcatggtgatgttgtaattgctgctataaccagttgcaccaacacatcaaatcctaatgtaatgctgggagctgctttagttgccaaaaaggcttgtgaattaggccttgaggtcaagccatggattaagacaagtcttgcacctggttctggagttgtgaagaagtacttggacaagagtggtctgcagaaatatctagaccagcttggcttccatattgtaggctatggttgcacaacctgcataggaaattctggagaacttgatgaaacagtatctgctgcaatttctgacaacgatattgtcgctgctgccgtgttatctggaaacagaaattttgaagggcgtgtgcacgcattaaccagagcaaattatcttgcctctcctccattggttgtggcctatgcccttgctggcacggtcaatattgattttgagaaagaaccaattggcatctcgaaagatgggaaggaggtttacttcagggacatctggccttccactgaagagattgctgaggttgttaaatcaagtgtgctacctgacatgtttaagagcacatacgaggcaataaccaaaggaaatcctatgtggaatgagctgtctgtatcagcaagcactctctacccatgggacccgacatctacttacatccatgagcctccttatttcaaggatatgacaatgtcccctcctggcccacggcctgtgaaggatgcttactgtctcctgaactttggtgacagtatcacaactgatcacatctcacctgccggaagtattcaccctgacagccctgctgctagatatctgaaggagcgtggtgttgaaaggaaggacttcaactcatatggcagtcggcgaggaaatgatgagatcatggctaggggaacttttgccaacattcgccttgtgaacaagttcttgaagggtgaggttggcccaaaaaccatccatattccatcaggggagaagctctctgttttcgacgctgctacgaaatacaagaatgaaggacatgacactattatcctggctggtgctgagtacggtagtggaagctctcgggattgggctgcgaagggtccaatgctacagggagtcaaggctgtgattgctaagagctttgaaaggattcaccgcagcaaccttgctggtatgggtatcattcctctatgcttcaagtcaggggaggacgccgacacccttggattgactggccatgagcgtttcacggttcacctcccggccaatgtaagtgagatcaagcctgggcaagatgttactgtgacgactgataatgggaagtccttcacttgcacacttcgatttgacactgaggtggagcttgcatactacgacaatggtggcattttaccgtatgtcatcagaaagatcgccgagcagtag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MPPLTSALLSRSSSTRIPAAAAAAAAISNPAGAAASSSSPSPPP                    PSSRPRPASPFASGLAGRIFGGRRAAARSSSSAAAVFERRFASAAAKNSYDEILTGLA                    KPGGGAEFGKYYSLPALSDPRIERLPYSIRILLESAIRNCDEFQVTGKDVEKILDWEN                    SAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMSKLGSDPNKINPLVPVDLVIDH                    SVQVDVARSENAVQANMELEFHRNKERFGFLKWGSTAFRNMLVVPPGSGIVHQVNLEY                    LARVVFNNGGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMSMVLPGV                    VGFKLTGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGGGMSELSLADRATIANMS                    PEYGATMGFFPVDGKTLDYLKLTGRSDDTVAMIESYLRANKMFVDYNQPEAERVYSSY                    LELNLEEVEPCLSGPKRPHDRVTLKNMKSDWLSCLDNDVGFKGFAVPKESQGKVAEFS                    FHGTPAKLKHGDVVIAAITSCTNTSNPNVMLGAALVAKKACELGLEVKPWIKTSLAPG                    SGVVKKYLDKSGLQKYLDQLGFHIVGYGCTTCIGNSGELDETVSAAISDNDIVAAAVL                    SGNRNFEGRVHALTRANYLASPPLVVAYALAGTVNIDFEKEPIGISKDGKEVYFRDIW                    PSTEEIAEVVKSSVLPDMFKSTYEAITKGNPMWNELSVSASTLYPWDPTSTYIHEPPY                    FKDMTMSPPGPRPVKDAYCLLNFGDSITTDHISPAGSIHPDSPAARYLKERGVERKDF                    NSYGSRRGNDEIMARGTFANIRLVNKFLKGEVGPKTIHIPSGEKLSVFDAATKYKNEG                    HDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFERIHRSNLAGMGIIPLCFKSG                    EDADTLGLTGHERFTVHLPANVSEIKPGQDVTVTTDNGKSFTCTLRFDTEVELAYYDN                    GGILPYVIRKIAEQ</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
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DNA = <dnaseqindica>6366..6434#6030..6272#5850..5948#5263..5742#5052..5150#4738..4859#4542..4660#4397..4464#3939..4124#3558..3633#3400..3479#3262..3318#3043..3185#2824..2968#2294..2455#2012..2197#1591..1683#903..1063#409..516#28..292#ctcctccgcttcgcagaccagccagccatgcctcccctcacgagcgccctcctctcccgctcctcctctacccgcatccccgccgcggcggcggcggcggcggcgatctcgaatcccgcgggcgccgccgcgtcgtcgtcgtcgccgtcaccgccgcctccgagctctcgccccaggccggcgtcccccttcgcgtccggcctcgctggccgcatcttcggcggccgccgcgccgccgcgcgctcctcgtcgtccgccgcggccgtcttcgagcggcgcttcgcctcggcgggtaagggggggggggggggggctaacgacctggtgggtgggggatgggatgggggctggctgtatgtgattatctctctgatggtttatctgcttttttctgtttgttttgggcagcggcgaagaactcgtacgatgaaatcctgacgggcctcgcgaagccgggaggcggagcggagttcgggaaatactacagcctgcccgcgctatccgatccgcggatcggtgagtgttttgatgccttccagtattgttggacgccccgatccactatttggtgttggatgtgtgtttttttttgtttgattgttagttcgtgatggttgaattgggcattcaacgaggggttgacgctttcatctctttcggtcggtcaatcgtttgtgaagatttgaattggacgaattgtttggttttgttcgagggctctgacctccggttagagcgtaatgtggttgtgaaattggaggtttagatgtgttcagaccaaggaattttgatgcatttgtgctttccttatatagaatttcctttgaaggttttgatctacctctgctgccgaattattagaacaacgatgatttgatccatgttttggtggttttgatcagagcgactcccttactcgataaggattcttctcgagtcggcaatcagaaactgtgatgagttccaggtcaccgggaaggacgttgagaaaatcctggactgggagaacagcgcaccaaagcaagtcgaaatcccatttaagccagcccgtgtcctcctccaggtactaatcctggcaccgtctcatgctttttgatctactttgttcgattgctgttgatagaataattgtgagctggaaaagtttcagtcaatagcctttgatgacaggaatattggaactgtagttcccactttcttacgaacctatcctttcaaggaagtggagttgcacatggcttatcttttgttcgtttttctgatctatgattgctactgtatgtaatgttgtttaatgatagatatggaaacaacaaggcagaaggtgctggtggctgtacaaaattacctgcatctccatattatattcttattctctagacaacaatgaaagtcaatcattctattttagtctggcatgtggctagtgatagctggatatattgcttattatttatatctgatgtcacattttctgatgatgtgtcgatgcaaatgtgttctgctttctcagttgttgtaactgagttgttgaagctaccttgatgatgactcagccagctaaccttttacctgatttacacattacaggatttcactggtgttccagcagtggttgatcttgcgtgcatgagggatgctatgagcaaacttggcagtgacccaaacaaaattaatcctctggtgagtccatagtcaaatgcatacaattacaaaattactaccctctcattgtgcaacttatccatcacccatcggtatgttacccttgatacgtgatttacaataaccaagcttgtttcatttattgttagttgataccctactttggacctttcctgctctattaagctgtgtatttaagcacggttctgatcatctccttacatgtagctatctgtatatacggattatattgggctacatgcatatgtggtataaattggaaaatggtgcttgtgcttttgctgacattactggatgtgcctttctccatttatttcgtttgcaggtacctgtagatcttgttattgatcattcagtacaagttgatgtggcaagatcagaaaatgctgttcaggcaaatatggagctagagttccatcgtaacaaggagaggtttggatttttgaaatggggttcaactgctttccgtaacatgcttgttgttccacctggatctggaattgtgcatcaggtatatcaagaaacaatcattctgatatttttctcaaatatttcacctttgttatataaccacagtaaacactaaccacatgtttttttttgttaggttaaccttgaatatctggccagagttgtgtttaacaatggtgggatcctttaccctgatagtgttgttggaacagactcccacacaactatgatagatggtcttggtgttgctggatggggagttggtggtatagaggcagaagctacaatgcttggccaggtgaaaaaaaattctatggctaataaattttcatctctgatactatggttgcaatgaattacagagtttgtatcaggatgttatttttctctttagcataacaaaagaaaagggtggttgggtttattcgacttctacctctttatcacacaacacacattcagcttgccacacgttttgtgtttggtcatggctcaccaaattcttattctttgattgtaaattttaacgtatgcctgcatcaacatgtcatgcaccaaaaccccaacagtatgtaaataagcttgaaccttggggggtggctgcttctgtccatttgattgcccacttatgcctattttctgttctaaatgcgctactttctgcagccaatgagcatggtattgccaggagttgtgggcttcaagttaacagggaagctgaggaacggtgttactgctacagatttggttctaacagtaactcaaatgcttaggaaacatggcgttgtcggaaaatttgttgaattttacggtattcgccttgcatatctttaatacatgtctctttcttttgatagcaagtctaatgctagttctcaattccagggggaggcatgagtgaattatcactggctgatagggctacaattgcaaacatgtcaccagaatatggtgcaactatgggtttcttcccagttgatggaaagacattggactacttgaagctaactggcagaagtgatgacactgtaagttataggcagttatcttattggatttgatcctaagtgtacttgtatagttctaatatatttgtgaatttaggtggccatgatagagtcttacctgcgtgccaataagatgttcgtcgactacaaccaggtgattttcatattatatctgaagagcatattatttggcaaatactttttttctttattgatgccctttttcttaatgtagcctgaagctgaaagagtgtactcatcttatctggaacttaacttggaggaggtagagccatgcttgtctggaccaaaacggtaatgtacttgattaattcataatcttggcacatgtttagccacattcagttataaactgaagaacccactgcacaggcctcatgaccgagtgactttgaagaacatgaaatcagattggctgtcttgcttggataatgatgtaggcttcaaggtaaagatctactgtacagataactacataactcttcaactggtgttgttgtgatgttctgacttttgttgtttatttgctgatattaaatggcattccaaatcctcatttaagttgcttaatcttggatcacatttgggatatattcatacattatgataaacaaattattttttagtgaaagatgaacaaaatggggccccatatttctatgttctgctattgcacagaatacatctttggtttatacattgtcctgttatcttttccattttcatcctatcctcactacgatcattttgcagggttttgctgtccccaaagaatcacagggtaaagttgctgagttctctttccatgggacaccagcaaagctaaagcatggtgatgttgtaattgctgctataaccagttgcaccaacacatcaaatcctaatgtaatgctgggagctgctttagttgccaaaaaggcttgtgaattaggccttgaggtgaagccctttaccttgtttccagcttgacatccttgtttaatttatctcaagtatgcatatgtgttttaaataaacaaaaaaaatcatctctatcagttcatttatgctcgatatattgtattcctattgagatggatcaatcattgtcccttatcatcctattccattttcctgttattgtcaatgaaatgtaattgcagtgagttattttgttcttcctgagttctgaaaaatgcaagtactactttaatatttatttttatcatcaggtcaagccatggattaagacaagtcttgcacctggttctggagttgtgaagaagtacttggacaagaggtaggtgattgttccttgaattcaaagtttcttgtttttgtcagccttagttattctcactttgtatttccttgcagtggtctgcagaaatatctagaccagcttggcttccatattgtaggctatggttgcacaacctgcataggaaattctggagaacttgatgaaacagtatctgctgcaatttctgacaacggtgagtttgacatcattagctaagaaagtgtgtagagttgagaagctcgctacttacttttctctcttactttttagatattgtcgctgctgccgtgttatctggaaacagaaattttgaagggcgtgtgcacgcattaaccagagcaaattatcttgcctctcctccattggttgtggcctatgcccttgctggcacggtaagataacagattttgtttgacatatgcctgtaatttcaaactaaacagttaaattactgtactattatagcaatatactcaagaatcaaatcaaagatgtgattggtaatatgtaagctagctttttatacatcaatgactgcatgtcaaaagttctgcccattttctaaactgccagatatgccacaggtcaatattgattttgagaaagaaccaattggcatctcgaaagatgggaaggaggtttacttcagggacatctggccttccactgaagagattgctgaggttagcactgcagttttgtccgcttcccttttttcatataaatctatacttgcctattgaaaacatagtggattccataagtgcttcatgctggtgcttttaattttggtaggttgttaaatcaagtgtgctacctgacatgtttaagagcacatacgaggcaataaccaaaggaaatcctatgtggaatgagctgtctgtatcagcaagcactctctacccatgggacccgacatctacttacatccatgagcctccttatttcaaggatatgacaatgtcccctcctggcccacggcctgtgaaggatgcttactgtctcctgaactttggtgacagtatcacaactgatcacatctcacctgccggaagtattcaccctgacagccctgctgctagatatctgaaggagcgtggtgttgaaaggaaggacttcaactcatatggcagtcggcgaggaaatgatgagatcatggctaggggaacttttgccaacattcgccttgtgaacaagttcttgaagggtgaggttggcccaaaaaccatccatattccatcaggggagaagctctctgttttcgacgctgctacggtaatatacttgcacttaaaatccaaatttacatttcatttatgcaaatatatattgtactaatgcattctgaaatttacttatccatttttatgttcttaccacagaaatacaagaatgaaggacatgacactattatcctggctggtgctgagtacggtagtggaagctctcgggattgggctgcgaagggtccaatgctacaggtaacttcgattccatcacaatttcttcagcaaaggccattaatttcttactaatgggtgtacttcgatttggtgatacagggagtcaaggctgtgattgctaagagctttgaaaggattcaccgcagcaaccttgctggtatgggtatcattcctctatgcttcaagtcaggggaggacgccgacacccttggattgactggccatgagcgtttcacggttcacctcccggccaatgtaagtgagatcaagcctgggcaagatgttactgtgacgactgataatgggaagtccttcacttgcacacttcgatttgacactgaggtatgatcattcgtcatcaatgatttcattagagtgttgggtgctgattgtgtatgttgccgatgttgatggatttgttaattttttgtccaggtggagcttgcatactacgacaatggtggcattttaccgtatgtcatcagaaagatcgccgagcagtaggatgaacgctcaagaagattgcgatgaggcgaatcgtaattgttgtaaacagcttgattagcgcaaccccattttttaggaatacctttcaaataaccttctgagatatccgcgaagaactcagaaattttgtgagctactacacttgcagttgtacgctgccacgggaaatgcggcgctaaatgacgctatgtgaacattaacattttcacttaaacacacgttgctaataattttccggc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055433.1 RefSeq:Os03g0136900]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 3]]
 
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[[Category:Chromosome 3]]
 

Latest revision as of 07:05, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information