Difference between revisions of "Os03g0248000"

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(Created page with "{{JaponicaGene| GeneName = Os03g0248000| Description = Autophagy protein Apg9 family protein| Version = NM_001056088.1 GI:115451904 GeneID:4332250| Length = 7415 bp| Defi...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os03g0248000|
 
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Description = Autophagy protein Apg9 family protein|
 
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Version = NM_001056088.1 GI:115451904 GeneID:4332250|
 
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Length = 7415 bp|
 
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Definition = Oryza sativa Japonica Group Os03g0248000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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Please input expression information here.
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AP = Chromosome 3:7870564..7877978|
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CDS = 7870788..7871730,7873120..7873230,7873330..7873400,7873475..7873552,7874457..7874663<br>,7874760..7874939,7875142..7875364,7876026..7876346,7876431..7877005<br>|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008396:7870564..7877978
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source=RiceChromosome03
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008396:7870564..7877978
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source=RiceChromosome03
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgatgtccttccgttcgaaggacagaaatgtgcaaccacgatttaattggccatggagaagcgaatcaccattatcagcacaactgctcattgatattccacctgaaatagagttatcggactacagaaggttgccaggttcaggaagcgagagcccatctggacttctccatggtgaaggcttcaaggacgaaccaattgctgacttggatattttctttgaaaggctttatgaatatttctgtgcaaaagggctacgatgcattgttaccaaatggataattgagatgcttaacgtactttttatggtatgctgtattgggttctttttcttaattgttgattggaatgccctcggccatttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtcgttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatggttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagtacattgaatattcgtgacttctactgtaacagtctgaaaattacagatcttgagatccaaaccatctcatggcccaaaataattgagaaggttgtcctgctacagaaatctcagaaactttgtgttgtaagggacctctcggagcatgatattatcatgagaataatgaggaaagaaaattacttgattgggatggtcaataaaggcattatctcatttccaattcgtccttgggtacctggagctggaccaactgtcaaatcccatttgcaaaacaggagaaaccatctgatactcccgaaagccctagaatggacattaaattggtgcatcttccaaagtatgtttgatagtaaattctgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgtatttgtgggcatttcaatgcttatcctttcaccctgccttgtaatattcccattagtgtacctcattctgagacatgctgaagaaatttataatcaccccagtacagcttcatctagaagatggtcaaacttatcaaggtggatttttagagagtataatgaggtagatcatttcttcagacataggatgaacaacagcgctgtgcactctttaaattacctgaagcaatttccaactccactgatttctataatggcaaaattcatatcttttgtttctggtggtttggctggtgctcttataatcattggatttctgggtgaatctgttcttgagggccatatctttggaagaaatctattctggtatactattgtttttggaacaatagctgccataagtcgaaaagtagtggctgatgaacttcaagtaattgacccagaaggcgctatgtgcaatgttgtccaacaaacgcattatatgcctaagaggtggcgtggtaaagaggacagtgaagtggtgcgaagagaattcgaaacactatttcagtttaccatagtaatgctgcttgaagagatggcctccattttcatctctccttacttgctcatctttgaggtaccaaagcgtgttgatgatattctgcgattcatctcagacttcacgatttatgtagatggggtgggagatgtgtgcagcctaagcttgtttgacttcagaagacatggaaatagaaactatgcttcaccatttgatgcacttaaaacgcttaggagctcccaagggaaaatggagaaatcatttttaagttttcaaagtgtgtatccatcatgggaaccaaatgcagaaggcaaacaattcttaactaacctccaaaagttcaaggaaaagcaaatacggcagcaggctcttgcacaatatcaagcaatggaagcatcaggctttgtggcaagcaccagaggtcacagggatgatatcttccaccaactactccctagtgatatccataaccgtgctgaggccatctcacctgctgtttacaatttgggcccgttaggattgcttgacacagatcaaagaagtcatccatatattctggattggtactacgtctgccatccacctcacttggatagaaccgaggctccttatttcaacgaagtgttccctgagaccagtgagaacacaggttcagcagcatttaaagcatctgaaattgaagaagcaaggggctgggactctgatatggttcccccgcctcgagcagatcgcgatgagtggaactttaaccatgaaagggttcgaagccatatggatgcatcgacatcaagcaatttgtttcatcatgctccagtagaacaccatgataccaaaggaaatattatcgattggtgggatcaagcacctgaacattctactggtcaacaaggaagttttctggagcctccggaatttggaaatcgatatgttgctggtaaccgttccagttatcactctggtgatgtgtctgatggaagtgtggaagagcttgagcgaagctataacagaagtagcagcagctggagaagacctcaagatttgtccactacaaggtatatggacgactctgacattgaggaagggttgaatcttccttttgctgatctcccgcagaaggatgaagatgctcgacatggcacatctgatactaatgaccccacgccagtcggccttcctgtaagaataattcctagaagcagtgaccctgtttag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MMSFRSKDRNVQPRFNWPWRSESPLSAQLLIDIPPEIELSDYRR                    LPGSGSESPSGLLHGEGFKDEPIADLDIFFERLYEYFCAKGLRCIVTKWIIEMLNVLF                    MVCCIGFFFLIVDWNALGHLKCGVEALESGEKPCDLMQVVKHNPLVPFTFPKMITIGS                    MVILTTYGLINFLKFFVQLRSTLNIRDFYCNSLKITDLEIQTISWPKIIEKVVLLQKS                    QKLCVVRDLSEHDIIMRIMRKENYLIGMVNKGIISFPIRPWVPGAGPTVKSHLQNRRN                    HLILPKALEWTLNWCIFQSMFDSKFCVRKDFLTSPAVLKKRLVFVGISMLILSPCLVI                    FPLVYLILRHAEEIYNHPSTASSRRWSNLSRWIFREYNEVDHFFRHRMNNSAVHSLNY                    LKQFPTPLISIMAKFISFVSGGLAGALIIIGFLGESVLEGHIFGRNLFWYTIVFGTIA                    AISRKVVADELQVIDPEGAMCNVVQQTHYMPKRWRGKEDSEVVRREFETLFQFTIVML                    LEEMASIFISPYLLIFEVPKRVDDILRFISDFTIYVDGVGDVCSLSLFDFRRHGNRNY                    ASPFDALKTLRSSQGKMEKSFLSFQSVYPSWEPNAEGKQFLTNLQKFKEKQIRQQALA                    QYQAMEASGFVASTRGHRDDIFHQLLPSDIHNRAEAISPAVYNLGPLGLLDTDQRSHP                    YILDWYYVCHPPHLDRTEAPYFNEVFPETSENTGSAAFKASEIEEARGWDSDMVPPPR                    ADRDEWNFNHERVRSHMDASTSSNLFHHAPVEHHDTKGNIIDWWDQAPEHSTGQQGSF                    LEPPEFGNRYVAGNRSSYHSGDVSDGSVEELERSYNRSSSSWRRPQDLSTTRYMDDSD                    IEEGLNLPFADLPQKDEDARHGTSDTNDPTPVGLPVRIIPRSSDPV</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
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DNA = <dnaseqindica>6249..7191#4749..4859#4579..4649#4427..4504#3316..3522#3040..3219#2615..2837#1633..1953#974..1548#attctgtccccgatcccgtcacgtctcctggaaacaccccacccgcttctcgtctcctcgtctcctcgttcgtctctcgcctcgtcttccccgtcctccgcgcgattccccaaccctccccgaagccgcagtccaccgcaagtcgcctgcctcctccgccccgcgccccctccccccgtgcgccggcgatcgccggtgcccgccaggtcggtggagtctattgctctctctctctctctctctccccccattccttccgcgccgctttcgtgctgattttttttagctttggatgaacgagttttcgttttggtgttaggcgttattgggatgagaaatctagggtttggaacggcggtgtgcggaggtgggttgggtgttggtggggagaggtttggctagaagttagctcaactggttgttaagtagatagccgtgaggtccgtgcgggacaccgaattgctttccgtggaggcgacacagacgatgtgaatggtgatatgtactgcgcgattacgtttcggctgcagttgattgatcaattcgtcaacatttctgagcaaaatccgtttcatcattaggaatgaattcatttggcatcacattgctgctgcctctggaaatggaggcactaccctggttggcatctagtgcatgtataggataagttcgtttttagccttattatccatggtgccttttcggtttacctgcgttaagcttgttcataattttgtttaggctcagattgtatgaaaaaggtagctgtatatagacgtacaagtaagagcgttagctcagtttcttcttagctcccatacttgtgagtttttacacacatacattttgttgtacttgctggaaattgctggtatgcaaagtgtgattcattgaattccttttggttttggtgacaggttatttcttgtggcatggcaaggatacatattggtcttggcttgttctttcatgaatgatgtccttccgttcgaaggacagaaatgtgcaaccacgatttaattggccatggagaagcgaatcaccattatcagcacaactgctcattgatattccacctgaaatagagttatcggactacagaaggttgccaggttcaggaagcgagagcccatctggacttctccatggtgaaggcttcaaggacgaaccaattgctgacttggatattttctttgaaaggctttatgaatatttctgtgcaaaagggctacgatgcattgttaccaaatggataattgagatgcttaacgtactttttatggtatgctgtattgggttctttttcttaattgttgattggaatgccctcggccatttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtcgttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatggttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagtacattgaatattcgtgacttctactgtaacaggtaacatttctgattaatatgtgtgtttatagctcagtgcaatcatcaatgactgaatccaccttctcttttctttttgtgtagtctgaaaattacagatcttgagatccaaaccatctcatggcccaaaataattgagaaggttgtcctgctacagaaatctcagaaactttgtgttgtaagggacctctcggagcatgatattatcatgagaataatgaggaaagaaaattacttgattgggatggtcaataaaggcattatctcatttccaattcgtccttgggtacctggagctggaccaactgtcaaatcccatttgcaaaacaggagaaaccatctgatactcccgaaagccctagaatggacattaaattggtgcatcttccaaagtatgtttgataggtaaggaagtctgtagctctgttacttttaactagctaacattggattattcggccaaagtattttgataacatttgtttggcaaatactctgctgtcaacataatgaatctaggtatctttttcttccacattaatcctgcgtttgggagaaagcgggtgaagacacccttaagttgtcatgtaataacacttaattgcacaagagagtgcaaatgtccctaccaatctttatcattctcttttgttatacattatgttcaatctgtgtggaatacagaattgttgatgttatgcataattgtctctagctagctggttactaaattctaaacatcttaactcaagctttactgctttactgattttctgatgacttcatagagatatcgagtaatttagatattcaatctgtgtaaaagctggatgcttttcttcacccccatctattcccatcaaacagctcttatgtggattttgcacaatagcacctaaagacgtatttgtgctaagataccctcccagcttccagtttgtacaacatccgctgaaaccttctagcaagagctcgcacatcgcattgggatgttccacgatttttttgtgtgtgtagttttaacctctaaaactatactgaaagccaatatcattttcttctgcagtaaattctgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgtatttgtgggcatttcaatgcttatcctttcaccctgccttgtaatattcccattagtgtacctcattctgagacatgctgaagaaatttataatcaccccagtacagcttcatctagaagatggtcaaacttatcaaggtggatttttagagagtataatgaggtaccttcttttgcagagatattattactattatgatgcagtcattgtcctgtccagtatttcttctaaatgcctgccatgtgcttactgtattatattaactgcaagctctgccatttgttgaggcctatagatactatcatgctatgcaatcagccttgtttttcttcgtctaaagctcagttgcttacaataatttcaggtagatcatttcttcagacataggatgaacaacagcgctgtgcactctttaaattacctgaagcaatttccaactccactgatttctataatggcaaaattcatatcttttgtttctggtggtttggctggtgctcttataatcattggatttctgggtgaatctgttcttgagggccatgtaagttatttcttccactttttctcatttgctattacacatttacacatgtcttattgacctactaaatctcacatacattcatatcttctgaagatctttggaagaaatctattctggtatactattgtttttggaacaatagctgccataagtcgaaaagtagtggctgatgaacttcaagtaattgacccagaaggcgctatgtgcaatgttgtccaacaaacgcattatatgcctaagaggtggcgtggtaaagaggacagtgaagtggtgcgaagagaattcgaaacactatttcaggtattttatcagttcgagagaattttgcatataccatatataatcaattagatatttagtgttctgtatactgtactacttggctttggaacttcaaccatcaccatcatcaaattttctagttatttgtgattctgctctttatttttttgtcattgaaagaactgcgcaaatgctctgggctgatgtccacataatcttatttgaacaaaattgtacaaatgcaaggtgcgcacacaaaagtacacgaaaaaaaggtggtttggcaaagagttgactgagagaattgtgcaatgtgcatataccgtactgaatcaactaatcaacatacttacttgtcctatgtgctgtacaatttggctttggaatgtcaccaatcactatcattcattttgtcagcactcatcgtctttctttattgagagaactatgaaaggttgtatgttgatctcaacagaatgttattcaacaaaattgtacaagtgcaatgcccaccttagagaagtacatgaaaaagtgacggcccaactaagttacatcgcagtaacgctgacaatcgtaaactcatttgatattaaagttgttcgtggccactgggtgattcagcagttgcatttttaaatgagtctcacttgcttattttgctaggtgaatctggaaataatagtgttcaaattctctgatagaactaatgacaaagcttggcattttctagttgttttatattgctttcagttaaagcgctatatctgaagatgaaaagaaaatgagtttctctttgtttaagtgctttgcagtctagatatcagtaccttacatttgtatcttggttgatttacgtttaatactctattgtccatatcatattgctctgaattttaactaagtaattttacaaatgcagtttaccatagtaatgctgcttgaagagatggcctccattttcatctctccttacttgctcatctttgaggtaccaaaggtaatgttctgaacttgctcaacaacagtgttttttctaaagttctttgacagtgaactccttttattatacagcgtgttgatgatattctgcgattcatctcagacttcacgatttatgtagatggggtgggagatgtgtgcaggttctctcttgatgtttcttaagaaatgaattttgttatcatatattgccactgggtttttaaaacatttaacatcatttattctctgtgtttcaatagcctaagcttgtttgacttcagaagacatggaaatagaaactatgcttcaccatttgatgcacttaaaacgcttaggagctcccaagggaaaatggagaaatcatttttaaggtacatttaatttcaagtttgaattacttcatgtgtttcttactagctattatattgtactcatattgttattaaaaagatatcttaagggccatcatttgtttattgaaatggctttggtgtactttagtagttcttggctctgaggttgtactgtggtatgatttgcacgctattgttatttcatactcttgttcaaactaggggggtattttagttctatgaacattttacgaggaaatgtgttagtttgtctatgtagtttgcccatgtcaacagcatagtgcatatggtctagactgtacaagtcaacattaactatggatatatgatgaaaatatttctcagaaaatcacaacaaatgtgtttccagcatttaattgaatttaccagagtattatttgagtatactgttttgtccataaatatggccaaagctgaacacttgaccatgatacttttttgggtgtcttcttgtcagcactatagactctgtagaatataggcactacggtgctgccctcgtcacatcatattccaagaaagcgacatccatttttggtttagtactttagtccaccatgtacattgcattttcaagagtgaataacagaataagcaaagttgtactccaagtttcacttgaggcttaatttggtccttgacgtttcagtccgtccatattagaccattagtccttcatgttttcattttagttcaaactcatcgttggacccacttgtgaagacatatagctaaatctaattagcatctctcttgataaatgactattattccctaatttcacatgtataagaaaaaggaaaagaaaaagacaaatatgtactatttggccagtgaacctgtttctcaagacccctccaatacccaatggttgtgtgctgtttttttttttctgttgaaatttgtgtacaatgagttctcttagataagggatattttgtaatagaaatgttgacttattattggctaatcaagtgggtgcaagtatgatttcgaaccaaaacgaatacttagaggacctgtgtggacaaaatagaacttaaaggaccaaattgagcctctggtggaactttagggactagattagctatccacccaacttccaactgtatgcaatgtgccctgctgttgtcctacaggcctaatggatactggccactttgtactatgtatagttaggaggttttagttagtcacaagtgttgcagccaagggtagatccaggcgtaggacacaacgcccttgtaattggttgttaccaattgcaaaattcgaagatacaaatggcctagcttaatacaagctagctcagcccaaggtttaatgctaaaaataggtctaattctattatatgattgtttacagttttcaaagtgtgtatccatcatgggaaccaaatgcagaaggcaaacaattcttaactaacctccaaaagttcaaggaaaagcaaatacggcagcaggctcttgcacaatatcaagcaatggaagcatcaggctttgtggcaagcaccagaggtcacagggatgatatcttccaccaactactccctagtgatatccataaccgtgctgaggccatctcacctgctgtttacaatttgggcccgttaggattgcttgacacagatcaaagaagtcatccatatattctggattggtactacgtctgccatccacctcacttggatagaaccgaggctccttatttcaacgaagtgttccctgagaccagtgagaacacaggttcagcagcatttaaagcatctgaaattgaagaagcaaggggctgggactctgatatggttcccccgcctcgagcagatcgcgatgagtggaactttaaccatgaaagggttcgaagccatatggatgcatcgacatcaagcaatttgtttcatcatgctccagtagaacaccatgataccaaaggaaatattatcgattggtgggatcaagcacctgaacattctactggtcaacaaggaagttttctggagcctccggaatttggaaatcgatatgttgctggtaaccgttccagttatcactctggtgatgtgtctgatggaagtgtggaagagcttgagcgaagctataacagaagtagcagcagctggagaagacctcaagatttgtccactacaaggtatatggacgactctgacattgaggaagggttgaatcttccttttgctgatctcccgcagaaggatgaagatgctcgacatggcacatctgatactaatgaccccacgccagtcggccttcctgtaagaataattcctagaagcagtgaccctgtttagactgaaaagctctcagatacgtatgtttgtgcatggttgtaaatatctgtgtgaaccacgtcacaaacttcaccaaaactggcaaacgccgcaaattcatttgtacagaaccacatattacctcactgtatagtcttctccctgccctcctagggattgtggagcaggggaagaaccattcttttgcagcacgaaatgcatggatccagttgttgcctcgtttc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001056088.1 RefSeq:Os03g0248000]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 3]]
 
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[[Category:Chromosome 3]]
 

Latest revision as of 07:12, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information