Difference between revisions of "Os03g0616300"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
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GeneName = Os03g0616300|
 
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Description = Similar to DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP). Splice isoform 4|
 
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Version = NM_001057195.1 GI:115454118 GeneID:4333450|
 
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Length = 5937 bp|
 
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Definition = Oryza sativa Japonica Group Os03g0616300, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
 
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AP = Chromosome 3:24095175..24101111|
 
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CDS = 24095446..24095524,24095791..24095825,24096067..24096243,24096511..24096634,24096720..24096820<br>,24096967..24097053,24097431..24097526,24097839..24097959,24098105..24098233<br>,24099088..24099179,24099290..24099401,24099819..24100171,24100300..24100529<br>,24100809..24100926|
 
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GCID = <gbrowseImage1>
 
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name=NC_008396:24095175..24101111
 
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source=RiceChromosome03
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008396:24095175..24101111
 
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source=RiceChromosome03
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggcggggacgccacccgatggcggaggagataggccgtgggagtcgtaccacaccgcctacaccaacgccaaagctggaatggagggagttgacaaagagaaggtgcagaagcaggtcgccgaacataaaattttggagctggaagcttcacgggatctttcaaagatatggcttcacaccgacatggatgccttttatgctactgtcgagatattggaaaatccatccttgaagggaaaaccattggcagtgggtagcatgtctatgatagctactgccagttatgaggcacggaagtttggagttcgtgcagcaatgcctggttttattggctgtaaattatgtcctgagttggtttttgtccgtccaaattttgagagatacacttattatagtgaattgacaagaaaagttttccaaaggtacgatcccaactttgttgcaacaagcctagatgaagcatatctcaatattacaaaagtctgcttcgatagaggcattactggtgaggaggttgctacagaacttaggggtgccattcaccaggaaaccggtctaacttgtagtgctggggtagctccaaaccgcatgattgctaaggtttgctctgatatcaacaagcctaatggacagttcattttgccgaatgaccaagaagctgtgacaacatttgtatcaacactacctataagaaagataggtggtataggcaaagtaacagaacaaatgttacgtcaggttcttggtatcagtacatgccaggagatgctgcaaaaggcttctttcttatgtgctcttttttctgaatcctcagctgatttctttatttcggttggtcttggactaggcggtactgaaactcctgagcaaagactaaggaaaagtataagttgcgagcgaactttcagggcaacagatgattgttctatgcttttcgagaaattagatagtctcgcagacaatttggccgatgatatgcaaaaagaatgcctgaagggaaggacactaacactcaaactaaagactgccgcttttgaggtcaggacaagagcagtaaccacacaaaactatatcaactccaaggaagacatcctgatctacgctaggaaattgcttaaggctgaactgcctctttctttgagattgatggggttgcggatgtcccaacttcgcgatgagaaggatgattcatctacccaaacccaaaagacactagatagatttttccgcacgcctgacaactcaaatgtcattggagcaaacagtccaagcatcggtaataccacaggaggggataactattgcactaatgtgatgaccaaggtcgattatttagagcatgattccatggatgatcaggcattgtttttgcatgaaaagaacttatttgttccagaaggaaggagctcagacaattataataatgatgctgcatcaagcaatccacttatgtgtgatggtgttggtggaaaagaattggatgatgactcctccagttcgaagggtacacatactgtaaagtttgatggccagctcaccagctctaacgcaactacttcatcgagtaaacctgatcagcttttctggataaatggctacatttgttccatttgtggatttgaactacctccaggttttgaggaggagagacaagaacattcagatttccacttggctgaaatgcttcagcaggaagaggcagtggacagcacaggccccctctcgaaagagaggttagctgaaaggccatgctctagcacacccacaccaaagaagaagctcaagtcttcaaaagaaggaaaacacatacctattgatgctttctttcacaaggttaacaagaacttgtaa</cdnaseq>|
 
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AA = <aaseq>MAGTPPDGGGDRPWESYHTAYTNAKAGMEGVDKEKVQKQVAEHK                    ILELEASRDLSKIWLHTDMDAFYATVEILENPSLKGKPLAVGSMSMIATASYEARKFG                    VRAAMPGFIGCKLCPELVFVRPNFERYTYYSELTRKVFQRYDPNFVATSLDEAYLNIT                    KVCFDRGITGEEVATELRGAIHQETGLTCSAGVAPNRMIAKVCSDINKPNGQFILPND                    QEAVTTFVSTLPIRKIGGIGKVTEQMLRQVLGISTCQEMLQKASFLCALFSESSADFF                    ISVGLGLGGTETPEQRLRKSISCERTFRATDDCSMLFEKLDSLADNLADDMQKECLKG                    RTLTLKLKTAAFEVRTRAVTTQNYINSKEDILIYARKLLKAELPLSLRLMGLRMSQLR                    DEKDDSSTQTQKTLDRFFRTPDNSNVIGANSPSIGNTTGGDNYCTNVMTKVDYLEHDS                    MDDQALFLHEKNLFVPEGRSSDNYNNDAASSNPLMCDGVGGKELDDDSSSSKGTHTVK                    FDGQLTSSNATTSSSKPDQLFWINGYICSICGFELPPGFEEERQEHSDFHLAEMLQQE                    EAVDSTGPLSKERLAERPCSSTPTPKKKLKSSKEGKHIPIDAFFHKVNKNL</aaseq>|
 
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DNA = <dnaseqindica>272..350#617..651#893..1069#1337..1460#1546..1646#1793..1879#2257..2352#2665..2785#2931..3059#3914..4005#4116..4227#4645..4997#5126..5355#5635..5752#agctttcacccacgggcgggacattttttctaaggaaaagagaggaaaaggcaacccctttcctcgcgcgcgaccgctggctggcggcggagccgacctcacctcgccggagtttaatcccccctccattcttcctcgtcctgattgccaacgacggcggagagctcgccggtgcccgacgtaccgacggctcgatcagtccttcccatcctctgttagcctcgcgtgacgcccgcctgcggtggggggaagaacctcgccgtcgcacgcgatggcggggacgccacccgatggcggaggagataggccgtgggagtcgtaccacaccgcctacaccaacgccaaagctggtgagtgtgcatttcccctcttcccgtcgcgtaagattgttgccagtagggggtagggttttgggcattagggggtctgcatcgcgcaaatcactggtacaaataaatccaaaagattaaggtagagagaacacgaattagatggagctttacttaggaagttatattacatgtttaggtgaatatgtgatatctgtggaaacaacatggaaccccagtgtgcaaagcatggctttggtctttattctcttgttattctgccttaggaatggagggagttgacaaagagaaggtgcagaaggtaatctacgaaatgagcaagggttcaaaatattttgaaaatgaacagaggaaagaggcaattaccaaacaaaaaatcgaccatctgcgtgcacaatgtgcaaagctgactgacaatgacatatcacattttcagaaggtaaagagtatttttttttaatgctggcctttgtctgtcgggtgctactttgttaattttaatgccatatttgaatcctaatttttgcagcatgcttaattttcaggtcgccgaacataaaattttggagctggaagcttcacgggatctttcaaagatatggcttcacaccgacatggatgccttttatgctactgtcgagatattggaaaatccatccttgaagggaaaaccattggcagtgggtagcatgtctatgatagctactgccagttatgaggttagcatactaggatttatgacatcttgacatgtgtaaggaattttttaatcactaaatagtgttggtgctattgtataccattttgttttggtccctattgaaatgattactgaagaatcgctgatcatgttgtgtaaaattagctttctttaagcattgtagactggatggacctgagttggtgttgcaatttatttatttattgaaagcacaatcaacatcccctgctatatagtgtagtacgtaatcaatttacttattcaggcacggaagtttggagttcgtgcagcaatgcctggttttattggctgtaaattatgtcctgagttggtttttgtccgtccaaattttgagagatacacttattatagtgaattgacaagaaaaggtttgtacattattactgtttattgaattaccatgaaatttttttagcgtatcgtaattgtattaatttatcgcttactttgtagttttccaaaggtacgatcccaactttgttgcaacaagcctagatgaagcatatctcaatattacaaaagtctgcttcgatagaggcattactggtgaggaggtaattatcatgacttcctggtgaattacttatgactaatgaaataaatatggtttgatttgtatttgatggcttacattatttttctacaatccagtacttcgacactgaaagtttattgaccattgtatatgtttattttgaaggttgctacagaacttaggggtgccattcaccaggaaaccggtctaacttgtagtgctggggtagctccaaaccgcatgattgctaaggtcagacattgtagcttttgtttgtttgtttgtttgtttttttgactgaaagtttgtctttagaggatctgtggttgtttgctgttatagaattataccacttctctctgtttgttgcgtatgcttttttttttttagtttcatgtttggttaaaatgaaattcataaacaaatatttattattagtactggcaaggatttcacattgtgtaatgtgtagccaataggggttgcaaccttgcgattgcaaagtctgttcaccacaaatgtctggaaatttttttagctcaatagttctaatcatctttctcccttcaaggtgattcatgagcaaagtttataaggtctcttctcccatattcttgtctttttgctaggtttgctctgatatcaacaagcctaatggacagttcattttgccgaatgaccaagaagctgtgacaacatttgtatcaacactacctataagaaaggtactcctgtttttagtagtgaagaatggaccttgtttctagaagtattttgttgttctaatagttcttgtttccttcatatatatatattcattcgtacattgttaaaccactaaatattctaaccagtgcgcatattctttccacagtagtccttcaaaacaatagcatttgggcattccccatttatggacaccactttttacttctttaattgagatggagttttctttactactaagtgctttgcctctttggacattcatgaaaaaggtgaaggctgattttttatttgaagatctttgtatgcagataggtggtataggcaaagtaacagaacaaatgttacgtcaggttcttggtatcagtacatgccaggagatgctgcaaaaggcttctttcttatgtgctcttttttctgaatcctcagctggttcgtatgttagtaacacttgttagttccattgcaagttttcagaagctatattatacctatcccaagcagacaccacaattcaatttcttgaaccaaacaccattctgtgcctgcttaatttgatcctttggacgttctccagatttctttatttcggttggtcttggactaggcggtactgaaactcctgagcaaagactaaggaaaagtataagttgcgagcgaactttcagggcaacagatgattgttctatgcttttcgagaaattaggtaaacatccttactaagttattgttctagctatgaggcctgttgattgtagatttcaaaccttgaagctactttgaaatttcatatgctattgttactaagtaactaggttgtcttacagaagagacttgcaatcttattcgaacagaagcatttttcctattttaatggtatatttgtcaataggccaagagcatattattttgcgcaataatttgagacacgtcatgattattcgagagcttgagtagaaagtagttgtttgaaattagtcaattatgctgcaacaagctgtttacatttgatgaggaaatataatttctggtgagtggtagttttggttgggatagcaaactatgcaaggtggaacttgttaggcagctttgactgcatacctgagatctggtgttcaatcttgatagtgctggggaccactggtccgggattgaaggatcccaacgctctatgaatatgagctatttcatgtgtcaattattctacatttctacatatgagatactagaagccaagttgactggaaacaggcaactaaccagggtttggtatttcagaattctgaaatcttaaattttggataaggtacagaaaaaaaaaagagtattatcagaacatgtgtgtgtacataggaaaagaactggtgccactataactatgtgtgtttgatatgataaattcctaaagtaactgcaaaaataatatacttgtatgtaaagcatttaaatgcgttaaaagattatgtaatgattttcaggccttaccacatgctatgtgctaaatctgtaaatgtttctccatgcgtgactcacacccaccatattattatttatttgcagatagtctcgcagacaatttggccgatgatatgcaaaaagaatgcctgaagggaaggacactaacactcaaactaaagactgccgcttttgaggttttcatcttccatttgtataacattaactagtctccagtaattataggacttagatcaccaggagtttttgttcatggctcattagattgatcaaccatctaaaccaggtcaggacaagagcagtaaccacacaaaactatatcaactccaaggaagacatcctgatctacgctaggaaattgcttaaggctgaactgcctctttctttgagattgatgggtaagcatgagcttccatagtatttgatactgttattggatgatgcccaagttgatctagctgtgttgacagcgtaggcatgtgattatgccatggtgcatgcttcttttttgaccttatctggaatgtaatgaacataaaagacatggggcaggagttttctttgagcagtatatggattaatgttgtgctccttaaaattagcgaatgaattctcctcctttgatgcattaggtagagttcctgccctttttttattaaaaaaataatataaaaggcacactatgtactgatttttattttactatgttcatatttttgatgtatctggatgtattgcattttatatattttttaatatgtttgctcttgtttcccaatggagtgagtaacagtcatgccaatacaattcaacagggttgcggatgtcccaacttcgcgatgagaaggatgattcatctacccaaacccaaaagacactagatagatttttccgcacgcctgacaactcaaatgtcattggagcaaacagtccaagcatcggtaataccacaggaggggataactattgcactaatgtgatgaccaaggtcgattatttagagcatgattccatggatgatcaggcattgtttttgcatgaaaagaacttatttgttccagaaggaaggagctcagacaattataataatgatgctgcatcaagcaatccacttatgtgtgatggtgttggtggaaaagaattggatgatgactcctccagttcgaaggtatgtgcttttgtctaattattccattgacaaagggataatattgattcaacaccttttaagtgtttctttactgagtgtttccatgcttaatgaaagacagaaagctaacctttttccccttgcagggtacacatactgtaaagtttgatggccagctcaccagctctaacgcaactacttcatcgagtaaacctgatcagcttttctggataaatggctacatttgttccatttgtggatttgaactacctccaggttttgaggaggagagacaagaacattcagatttccacttggctgaaatgcttcagcaggaagaggcagtggacagcacaggccccctctcgaaagagaggtatgtatctattgccacacgctcatagatatccctatgttatttcttgatctgctttagttcagtgacgtaataaatattatttaacgagatgtaaatcctgaagtgttttactgggattattactgtgggtgagttgccttttgccatggttatttgaaaataaattagctgagatgaagaatttcatgggtatgaaccttttttttccctgtggagctgttatcatgtagacatcagatgaatttcatgggtatgaaccttttgtgtattcagcaggttagctgaaaggccatgctctagcacacccacaccaaagaagaagctcaagtcttcaaaagaaggaaaacacatacctattgatgctttctttcacaaggttaacaagaacttgtaacatactgtagctacctattcaggcactctttttaatcctacagagcgatttgcccacttgaaaaactgctgtacatgtaacttcattccatgttcttttcagactagcatgtaaattgtaaatatataactcaagaatcctgttaaattaatttcataatttattcaaatgtcatacgattctgc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057195.1 RefSeq:Os03g0616300]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 3]]
 
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[[Category:Chromosome 3]]
 

Latest revision as of 07:24, 14 May 2015

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Structured Information