Difference between revisions of "Os03g0616300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0616300| Description = Similar to DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP). Splice isoform 4| Version = NM_001057195.1 GI:115...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os03g0616300|
 
−
Description = Similar to DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP). Splice isoform 4|
 
−
Version = NM_001057195.1 GI:115454118 GeneID:4333450|
 
−
Length = 5937 bp|
 
−
Definition = Oryza sativa Japonica Group Os03g0616300, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
+
Please input expression information here.
−
AP = Chromosome 3:24095175..24101111|
+
 
−
CDS = 24095446..24095524,24095791..24095825,24096067..24096243,24096511..24096634,24096720..24096820<br>,24096967..24097053,24097431..24097526,24097839..24097959,24098105..24098233<br>,24099088..24099179,24099290..24099401,24099819..24100171,24100300..24100529<br>,24100809..24100926|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008396:24095175..24101111
+
 
−
source=RiceChromosome03
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008396:24095175..24101111
+
 
−
source=RiceChromosome03
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atggcggggacgccacccgatggcggaggagataggccgtgggagtcgtaccacaccgcctacaccaacgccaaagctggaatggagggagttgacaaagagaaggtgcagaagcaggtcgccgaacataaaattttggagctggaagcttcacgggatctttcaaagatatggcttcacaccgacatggatgccttttatgctactgtcgagatattggaaaatccatccttgaagggaaaaccattggcagtgggtagcatgtctatgatagctactgccagttatgaggcacggaagtttggagttcgtgcagcaatgcctggttttattggctgtaaattatgtcctgagttggtttttgtccgtccaaattttgagagatacacttattatagtgaattgacaagaaaagttttccaaaggtacgatcccaactttgttgcaacaagcctagatgaagcatatctcaatattacaaaagtctgcttcgatagaggcattactggtgaggaggttgctacagaacttaggggtgccattcaccaggaaaccggtctaacttgtagtgctggggtagctccaaaccgcatgattgctaaggtttgctctgatatcaacaagcctaatggacagttcattttgccgaatgaccaagaagctgtgacaacatttgtatcaacactacctataagaaagataggtggtataggcaaagtaacagaacaaatgttacgtcaggttcttggtatcagtacatgccaggagatgctgcaaaaggcttctttcttatgtgctcttttttctgaatcctcagctgatttctttatttcggttggtcttggactaggcggtactgaaactcctgagcaaagactaaggaaaagtataagttgcgagcgaactttcagggcaacagatgattgttctatgcttttcgagaaattagatagtctcgcagacaatttggccgatgatatgcaaaaagaatgcctgaagggaaggacactaacactcaaactaaagactgccgcttttgaggtcaggacaagagcagtaaccacacaaaactatatcaactccaaggaagacatcctgatctacgctaggaaattgcttaaggctgaactgcctctttctttgagattgatggggttgcggatgtcccaacttcgcgatgagaaggatgattcatctacccaaacccaaaagacactagatagatttttccgcacgcctgacaactcaaatgtcattggagcaaacagtccaagcatcggtaataccacaggaggggataactattgcactaatgtgatgaccaaggtcgattatttagagcatgattccatggatgatcaggcattgtttttgcatgaaaagaacttatttgttccagaaggaaggagctcagacaattataataatgatgctgcatcaagcaatccacttatgtgtgatggtgttggtggaaaagaattggatgatgactcctccagttcgaagggtacacatactgtaaagtttgatggccagctcaccagctctaacgcaactacttcatcgagtaaacctgatcagcttttctggataaatggctacatttgttccatttgtggatttgaactacctccaggttttgaggaggagagacaagaacattcagatttccacttggctgaaatgcttcagcaggaagaggcagtggacagcacaggccccctctcgaaagagaggttagctgaaaggccatgctctagcacacccacaccaaagaagaagctcaagtcttcaaaagaaggaaaacacatacctattgatgctttctttcacaaggttaacaagaacttgtaa</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MAGTPPDGGGDRPWESYHTAYTNAKAGMEGVDKEKVQKQVAEHK                    ILELEASRDLSKIWLHTDMDAFYATVEILENPSLKGKPLAVGSMSMIATASYEARKFG                    VRAAMPGFIGCKLCPELVFVRPNFERYTYYSELTRKVFQRYDPNFVATSLDEAYLNIT                    KVCFDRGITGEEVATELRGAIHQETGLTCSAGVAPNRMIAKVCSDINKPNGQFILPND                    QEAVTTFVSTLPIRKIGGIGKVTEQMLRQVLGISTCQEMLQKASFLCALFSESSADFF                    ISVGLGLGGTETPEQRLRKSISCERTFRATDDCSMLFEKLDSLADNLADDMQKECLKG                    RTLTLKLKTAAFEVRTRAVTTQNYINSKEDILIYARKLLKAELPLSLRLMGLRMSQLR                    DEKDDSSTQTQKTLDRFFRTPDNSNVIGANSPSIGNTTGGDNYCTNVMTKVDYLEHDS                    MDDQALFLHEKNLFVPEGRSSDNYNNDAASSNPLMCDGVGGKELDDDSSSSKGTHTVK                    FDGQLTSSNATTSSSKPDQLFWINGYICSICGFELPPGFEEERQEHSDFHLAEMLQQE                    EAVDSTGPLSKERLAERPCSSTPTPKKKLKSSKEGKHIPIDAFFHKVNKNL</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
−
DNA = <dnaseqindica>272..350#617..651#893..1069#1337..1460#1546..1646#1793..1879#2257..2352#2665..2785#2931..3059#3914..4005#4116..4227#4645..4997#5126..5355#5635..5752#agctttcacccacgggcgggacattttttctaaggaaaagagaggaaaaggcaacccctttcctcgcgcgcgaccgctggctggcggcggagccgacctcacctcgccggagtttaatcccccctccattcttcctcgtcctgattgccaacgacggcggagagctcgccggtgcccgacgtaccgacggctcgatcagtccttcccatcctctgttagcctcgcgtgacgcccgcctgcggtggggggaagaacctcgccgtcgcacgcgatggcggggacgccacccgatggcggaggagataggccgtgggagtcgtaccacaccgcctacaccaacgccaaagctggtgagtgtgcatttcccctcttcccgtcgcgtaagattgttgccagtagggggtagggttttgggcattagggggtctgcatcgcgcaaatcactggtacaaataaatccaaaagattaaggtagagagaacacgaattagatggagctttacttaggaagttatattacatgtttaggtgaatatgtgatatctgtggaaacaacatggaaccccagtgtgcaaagcatggctttggtctttattctcttgttattctgccttaggaatggagggagttgacaaagagaaggtgcagaaggtaatctacgaaatgagcaagggttcaaaatattttgaaaatgaacagaggaaagaggcaattaccaaacaaaaaatcgaccatctgcgtgcacaatgtgcaaagctgactgacaatgacatatcacattttcagaaggtaaagagtatttttttttaatgctggcctttgtctgtcgggtgctactttgttaattttaatgccatatttgaatcctaatttttgcagcatgcttaattttcaggtcgccgaacataaaattttggagctggaagcttcacgggatctttcaaagatatggcttcacaccgacatggatgccttttatgctactgtcgagatattggaaaatccatccttgaagggaaaaccattggcagtgggtagcatgtctatgatagctactgccagttatgaggttagcatactaggatttatgacatcttgacatgtgtaaggaattttttaatcactaaatagtgttggtgctattgtataccattttgttttggtccctattgaaatgattactgaagaatcgctgatcatgttgtgtaaaattagctttctttaagcattgtagactggatggacctgagttggtgttgcaatttatttatttattgaaagcacaatcaacatcccctgctatatagtgtagtacgtaatcaatttacttattcaggcacggaagtttggagttcgtgcagcaatgcctggttttattggctgtaaattatgtcctgagttggtttttgtccgtccaaattttgagagatacacttattatagtgaattgacaagaaaaggtttgtacattattactgtttattgaattaccatgaaatttttttagcgtatcgtaattgtattaatttatcgcttactttgtagttttccaaaggtacgatcccaactttgttgcaacaagcctagatgaagcatatctcaatattacaaaagtctgcttcgatagaggcattactggtgaggaggtaattatcatgacttcctggtgaattacttatgactaatgaaataaatatggtttgatttgtatttgatggcttacattatttttctacaatccagtacttcgacactgaaagtttattgaccattgtatatgtttattttgaaggttgctacagaacttaggggtgccattcaccaggaaaccggtctaacttgtagtgctggggtagctccaaaccgcatgattgctaaggtcagacattgtagcttttgtttgtttgtttgtttgtttttttgactgaaagtttgtctttagaggatctgtggttgtttgctgttatagaattataccacttctctctgtttgttgcgtatgcttttttttttttagtttcatgtttggttaaaatgaaattcataaacaaatatttattattagtactggcaaggatttcacattgtgtaatgtgtagccaataggggttgcaaccttgcgattgcaaagtctgttcaccacaaatgtctggaaatttttttagctcaatagttctaatcatctttctcccttcaaggtgattcatgagcaaagtttataaggtctcttctcccatattcttgtctttttgctaggtttgctctgatatcaacaagcctaatggacagttcattttgccgaatgaccaagaagctgtgacaacatttgtatcaacactacctataagaaaggtactcctgtttttagtagtgaagaatggaccttgtttctagaagtattttgttgttctaatagttcttgtttccttcatatatatatattcattcgtacattgttaaaccactaaatattctaaccagtgcgcatattctttccacagtagtccttcaaaacaatagcatttgggcattccccatttatggacaccactttttacttctttaattgagatggagttttctttactactaagtgctttgcctctttggacattcatgaaaaaggtgaaggctgattttttatttgaagatctttgtatgcagataggtggtataggcaaagtaacagaacaaatgttacgtcaggttcttggtatcagtacatgccaggagatgctgcaaaaggcttctttcttatgtgctcttttttctgaatcctcagctggttcgtatgttagtaacacttgttagttccattgcaagttttcagaagctatattatacctatcccaagcagacaccacaattcaatttcttgaaccaaacaccattctgtgcctgcttaatttgatcctttggacgttctccagatttctttatttcggttggtcttggactaggcggtactgaaactcctgagcaaagactaaggaaaagtataagttgcgagcgaactttcagggcaacagatgattgttctatgcttttcgagaaattaggtaaacatccttactaagttattgttctagctatgaggcctgttgattgtagatttcaaaccttgaagctactttgaaatttcatatgctattgttactaagtaactaggttgtcttacagaagagacttgcaatcttattcgaacagaagcatttttcctattttaatggtatatttgtcaataggccaagagcatattattttgcgcaataatttgagacacgtcatgattattcgagagcttgagtagaaagtagttgtttgaaattagtcaattatgctgcaacaagctgtttacatttgatgaggaaatataatttctggtgagtggtagttttggttgggatagcaaactatgcaaggtggaacttgttaggcagctttgactgcatacctgagatctggtgttcaatcttgatagtgctggggaccactggtccgggattgaaggatcccaacgctctatgaatatgagctatttcatgtgtcaattattctacatttctacatatgagatactagaagccaagttgactggaaacaggcaactaaccagggtttggtatttcagaattctgaaatcttaaattttggataaggtacagaaaaaaaaaagagtattatcagaacatgtgtgtgtacataggaaaagaactggtgccactataactatgtgtgtttgatatgataaattcctaaagtaactgcaaaaataatatacttgtatgtaaagcatttaaatgcgttaaaagattatgtaatgattttcaggccttaccacatgctatgtgctaaatctgtaaatgtttctccatgcgtgactcacacccaccatattattatttatttgcagatagtctcgcagacaatttggccgatgatatgcaaaaagaatgcctgaagggaaggacactaacactcaaactaaagactgccgcttttgaggttttcatcttccatttgtataacattaactagtctccagtaattataggacttagatcaccaggagtttttgttcatggctcattagattgatcaaccatctaaaccaggtcaggacaagagcagtaaccacacaaaactatatcaactccaaggaagacatcctgatctacgctaggaaattgcttaaggctgaactgcctctttctttgagattgatgggtaagcatgagcttccatagtatttgatactgttattggatgatgcccaagttgatctagctgtgttgacagcgtaggcatgtgattatgccatggtgcatgcttcttttttgaccttatctggaatgtaatgaacataaaagacatggggcaggagttttctttgagcagtatatggattaatgttgtgctccttaaaattagcgaatgaattctcctcctttgatgcattaggtagagttcctgccctttttttattaaaaaaataatataaaaggcacactatgtactgatttttattttactatgttcatatttttgatgtatctggatgtattgcattttatatattttttaatatgtttgctcttgtttcccaatggagtgagtaacagtcatgccaatacaattcaacagggttgcggatgtcccaacttcgcgatgagaaggatgattcatctacccaaacccaaaagacactagatagatttttccgcacgcctgacaactcaaatgtcattggagcaaacagtccaagcatcggtaataccacaggaggggataactattgcactaatgtgatgaccaaggtcgattatttagagcatgattccatggatgatcaggcattgtttttgcatgaaaagaacttatttgttccagaaggaaggagctcagacaattataataatgatgctgcatcaagcaatccacttatgtgtgatggtgttggtggaaaagaattggatgatgactcctccagttcgaaggtatgtgcttttgtctaattattccattgacaaagggataatattgattcaacaccttttaagtgtttctttactgagtgtttccatgcttaatgaaagacagaaagctaacctttttccccttgcagggtacacatactgtaaagtttgatggccagctcaccagctctaacgcaactacttcatcgagtaaacctgatcagcttttctggataaatggctacatttgttccatttgtggatttgaactacctccaggttttgaggaggagagacaagaacattcagatttccacttggctgaaatgcttcagcaggaagaggcagtggacagcacaggccccctctcgaaagagaggtatgtatctattgccacacgctcatagatatccctatgttatttcttgatctgctttagttcagtgacgtaataaatattatttaacgagatgtaaatcctgaagtgttttactgggattattactgtgggtgagttgccttttgccatggttatttgaaaataaattagctgagatgaagaatttcatgggtatgaaccttttttttccctgtggagctgttatcatgtagacatcagatgaatttcatgggtatgaaccttttgtgtattcagcaggttagctgaaaggccatgctctagcacacccacaccaaagaagaagctcaagtcttcaaaagaaggaaaacacatacctattgatgctttctttcacaaggttaacaagaacttgtaacatactgtagctacctattcaggcactctttttaatcctacagagcgatttgcccacttgaaaaactgctgtacatgtaacttcattccatgttcttttcagactagcatgtaaattgtaaatatataactcaagaatcctgttaaattaatttcataatttattcaaatgtcatacgattctgc</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057195.1 RefSeq:Os03g0616300]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 3]]
 
−
[[Category:Chromosome 3]]
 

Latest revision as of 07:24, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information