Difference between revisions of "Os03g0679800"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
−
GeneName = Os03g0679800|
 
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Description = Tetratricopeptide-like helical domain containing protein|
 
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Version = NM_001057434.1 GI:115454596 GeneID:4333720|
 
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Length = 10733 bp|
 
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Definition = Oryza sativa Japonica Group Os03g0679800, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
−
 
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
−
|
 
−
Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
 
−
AP = Chromosome 3:27720161..27730893|
 
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CDS = 27723134..27723359,27723493..27723567,27724331..27724498,27725449..27725580,27726004..27726143<br>,27726791..27726901,27727320..27727439,27728689..27728790,27730074..27730244<br>,27730331..27730410,27730585..27730648|
 
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GCID = <gbrowseImage1>
 
−
name=NC_008396:27720161..27730893
 
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source=RiceChromosome03
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
−
name=NC_008396:27720161..27730893
 
−
source=RiceChromosome03
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggagaagaaggataagggaaggcaccgcggccgcgacggcggaggcggaggcggcggcggcggtggtggtggtggtggtggtgtggatcccgccggtggagggagcggaggaggagggccgggaatggggcggcgcgggagcgatgcgcgtggccagcaggcggaggcggcggccgcggcaatcagcggcatcgccacccgccttggcttcgggtgcaccatcaatgtcggcggcgggatgccaccgcagatggagttcctgatggcgtgtacggacggcgacgtcgcgcgcctcaaggaggtggttgatagcatggatgaggatgatcggcaatcgctcacctctgtgaggatggaggggtatgagccactgtttgaggcagcaagctcgggaaaaattgatctctgcaagtacttggtggaggagcttgggttcgatgtcaatgccgaagctaatcatgattccggtatgacacctttgttttgcgctgtgttggatggacaagagattactgtgaagtattttcttgacaaaggtgctgatccgaataagaaagatgcagcaggctttgctcctcttcatgaagctgcaaaaaaagggcacgttggaatagcacgactgttgttatctaaaggagctagtgttgatgtatcttcttctgaagggacacctcttcatgttgctgcctctaatggaaaatctagcactgtgcagattttattagagcaccgcgcaaatccaaacgtgatattaccagattgttatacaccattgaccgcagttctttctgccactcctgaaatagtgaatgaatctgagtgtttgaagtgcatgaaactccttgtgaaggctggtgctatttataatcttgcaactcctgatactccattgaagatagcaactagaaatggcttaactgagtgtgttgcatacttgctggagatcaccacagttaaactaagtgaacatgacaaaggaagtgatggagacagaaaatctaagctgaaattacatggtggaaaagcatttgaggagggggactatgctggtgcaatcatattttacaccgaggcaatgaaacttgatcctgcagatgccacactgtattcaaacaggagcctttgccatctgagaagtggtgcagcgcaggaggctttgctggatgctaatgattgcataaaactcaagccagagtggactaaaggtcactatcgcaaaggatgtgcccacatggcactcaaggaatacgaagaagcttgtactgcattcatggctggaacaaagctcaatcctttaaacgatgaaatgcaggatgcattttgggaggcagctaaaggaatgatgtatgaacatatggctggaaagcgcgtcagctcggttgattag</cdnaseq>|
 
−
AA = <aaseq>MEKKDKGRHRGRDGGGGGGGGGGGGGGGVDPAGGGSGGGGPGMG                    RRGSDARGQQAEAAAAAISGIATRLGFGCTINVGGGMPPQMEFLMACTDGDVARLKEV                    VDSMDEDDRQSLTSVRMEGYEPLFEAASSGKIDLCKYLVEELGFDVNAEANHDSGMTP                    LFCAVLDGQEITVKYFLDKGADPNKKDAAGFAPLHEAAKKGHVGIARLLLSKGASVDV                    SSSEGTPLHVAASNGKSSTVQILLEHRANPNVILPDCYTPLTAVLSATPEIVNESECL                    KCMKLLVKAGAIYNLATPDTPLKIATRNGLTECVAYLLEITTVKLSEHDKGSDGDRKS                    KLKLHGGKAFEEGDYAGAIIFYTEAMKLDPADATLYSNRSLCHLRSGAAQEALLDAND                    CIKLKPEWTKGHYRKGCAHMALKEYEEACTAFMAGTKLNPLNDEMQDAFWEAAKGMMY                    EHMAGKRVSSVD</aaseq>|
 
−
DNA = <dnaseqindica>2974..3199#3333..3407#4171..4338#5289..5420#5844..5983#6631..6741#7160..7279#8529..8630#9914..10084#10171..10250#10425..10488#gaccggtgatggactttactctattattatcattagttggtactgaatgtatgtctatgtaatttgtatatgttcatatttatttaacttttatgtatcgttgtcaccttattatcatcgggatttaaatttcaatctccataaatattacgcacacacaaatgtgtatagtgatggatgcgcgcacatgcgttctgtataaaaaaaatctattagacgtattaactcagtattgtcttttgaaaattacatgagtgataaccgattaatcactctttaactaagtaatatcagcacttaataccaaattctttttttttactgtctagtactacctccgtttcagttataagactttatagcattacccacaatcatatatatgttaatgaatctaggcatacacatatgtctagattcattaatatatatatatatatatatgaaacggaggaagtagcaaatatttgctcaaaattacaactattcaattaacggtcatctcgaaagtagaatttgtgaagaactctagtgcacgtccattacatagctactgcagaaaaaaatgttaatattagttcaccatattttcttcgatataataatactacacgtacgaaaaaaaatattaacatgggaaacacacacgtttctggcccaccccatgccatttacgcttaggcccttcacagtgtgtttgcgtggtgagtttctttgtgccgccagctcaaatgaatgcctacgtggcgagtaattgcgcatccctgcagagcatctcacctccacgcagggagatgagttttctcgctcttcgtgagtccacacatggcccacaaacgaatcgtgcctgcgttgttggggtcgagcctccatctcgtcgtctcctcgcgccacatcgaaaaacctattcccaaaatcaccctcccggccatggattgatccctcccatgccaccgattccgtcactcccgcacaaacctcgccatccccttcggagaaacgcacggaggccaacggagcaccgtcgatgtgaggtggatcctcgacttcgccgctggcgggctagatgatgacgacgacttcctcttccacgccacggaggagttggagtggagccactacaaggccaagcgtcgcgcttctgcctcaccgccgccgccatgaggcggatcctcaacttcgtcgccggtgggctggatgacgatgacaacttcctcatccacacagcggaggaaacggagtggagccactatgaggccaagcgtcgcactttcatcctgccacctccgccgtgaggtggatccttgacttcgccatcgacgggctggacaacgacggcaacttcctcttccacgcccaggagacagagcggagccatgtgcggatgacgaggaagacgacgacgacttcctcttcttcgagaagtggtgcatttgcggccgtgacgcctggttgagagaggcgatggcgatagggaggagagaggcgaaggagagggagctcaggcggtgggcaacaggttgagggaggcgatgccgatagggaagagagaggagaagggtagctgggggaattaatttattgggctggggcaccttcattgtcttggtcacctgtattgtgagctttgtagtctcgacactagctcgccccaatcaaagccatgcaaaagaagtaacatgcactgtggagttgaatggccttgggctgatttcgtgtgtcacataggctagagacacgcatagcgtggcttgcatagttattgcttaaaggcaaggtctgtggcttcgcagttgcaatcctttactatgtgcacgccacctacttaccctaatccccttagcccatatgcatatactatctccgtctctaaatgaagctatttttagcacagtgtcttgtctcaaaataaagctatttctccacctacctcctatcaactaatcacaaccattcttcttcagctgctttctcttttcaaccaattatgtattttctccaattattctcacggtctcatctaccttcttaatactcgtgtcaacctataaaatgtatatatattttgggacgggcgaagtataaggaaagaaaaatctccgtacgctgttgtctggtgacgatctccagttatccactgtatatataaaaggaaagtgaaggatgagctccaccattcggcagcctcatcatcatgcgtcttcttgctcgacaagcaccttaattagatcgtaatccctccattaaaaaaaaaaggagggcaacctaggaggggtgtgacccctccccaacgaatctacacaaattggttttttttagggagggaatagttattagtagtcacatctgcccaaaaaaaactatttttgaaagacctgaatttacaaagaaaaactctgcagcaaatgatttcacaattggatcacagagagagagaatcttgagctttatccacttgaggagaaatgcacggcgaagtgcagggcagcgaccatctcgttgacgctggtatatattttggtacacctaccattttacacgcggcacgtcccacaatctccgccctccgtctcatgcgaggcaaggccgcagctccccgctccatctaggccgtccgtacatacacgtgtcggccgatcgtgccactccggactttctctctccctcctctcccccgctgggtcaggctcctctaccttcaaaaggtcggtatgtatatgccttagtcactgacatgtggtcccgacgaaccatggacccacctgtcagtgactaaaggcaaggtgcttcggaggcggcggagagagatgatctcaatccctccgcgctgcgctgcgattaaagcggacgagacgtggccaccttccttcattctcctagaagccatcgcctcgtctctccgcttctcgcaagcaaaacccacatcgcccattcgcccccatcccattctgctcgccgtgctcgctgagctccatggagaagaaggataagggaaggcaccgcggccgcgacggcggaggcggaggcggcggcggcggtggtggtggtggtggtggtgtggatcccgccggtggagggagcggaggaggagggccgggaatggggcggcgcgggagcgatgcgcgtggccagcaggcggaggcggcggccgcggcaatcagcggcatcgccacccgccttggcttcgggtgcaccatcagtacgtgctaagcggccgctgtccgctgctccccgatcgtttctgctcgggctgattctgctctccggaagggatctctaatggtgggttgggtggtgttgttcgtcgtgcgtgcgtgcgtgcgtgtttgcagatgtcggcggcgggatgccaccgcagatggagttcctgatggcgtgtacggacggcgacgtcgcgcgcctcaagggtgagatcctacggctctaccccgcgcccgtcttactcccgaactgctcgtgcttcttcctgggataggggtttggttagggttttgagggcttttttttttagcttccgtgtggtggtgaactggtgatcgggaactttttttcagcattttctgtgccggctttgttgggggatattctactcaaatgtgttctcccatctttttgtgcatttgtgtaaacaattggatgagatggcttttagcctcatgcatcgtttctggttccgttacgatatgatcgtgtataccccgatcgtgcgtgttgttgatagaagtgtatgtgtgtttaatgcggcggagggttttcctgtctatttttggttcaaattggtactaatctagtaatctggatatgaatttgtttgtttgccattattcttaatagggattaataattactaataatacttctctttatgatgccatatttctgttagaggtctcttcctcttggttttgttttcttttgattaataattactaatactacttatctttatgatgccatatttctgtaagagatctcttccacttggttttgttttcttttctaagtgcttagatgtgattttcgtgaggtacttgtgtctccatttctctagaactttgatcttgttttatgcacatgcacacacaaaaaaaaacaacttctgcatgaactagaattacaatttgtgcaaatttgcgccttacttttcttttgaaactttcggtattgaagaggtggttgatagcatggatgaggatgatcggcaatcgctcacctctgtgaggatggaggggtatgagccactgtttgaggcagcaagctcgggaaaaattgatctctgcaagtacttggtggaggagcttgggttcgatgtcaatgccgaagctaatcatgattccggtatgtgcctttccaggttattgcattgttttattatgcttagtgcatctcccgtgagcaatgcaattgtaatgggagctgttgtatgtgaggaggttagtcttgatagggtcaggaactgtctttaccttatcatggagacattaactatagtgctgacatgctgctatctgaattggcacaccaatgtaacactgctatgtgaataaatccgtttagtactataatttgattcttaagtgttgtttcttgactagtcaccttttttaatgaaaacaaacaattctgtggcacctttgggacgtatgaatgtatgatgtcttgtgaggtagtattttctgagggagtactgcaagaatttccctgaagaaaactcaattcctgcactaatctagtaatttgttttttgtaacgggccatagataatataagaaaacatcatccaagaaagaatcacaatagcaaagtgttggtgatatgcctttttattcttatttgaaggattatctccttcagccttcctttttatattgcttttgcctactcttgattggtacagttgtgtctagacaatgcatgcagttcactttgtgaagctcatctattatgcacttgatttttcttctagttccttttgcgtggtatatacatgccatcaaattttggttctaagaacttgggaaatgggagttttgtatagttttaactatagtattatccttgttgatatgaacttattaagtggtgtttctgaatgattccattgtttaatattgcatgtcatataaatgcagtctgagctataagtatttcatgaagtgctcctttgcatatttggaattgtagcagctaatatttgtgcatttgcaaagctgttataccacaacactacctgtatcgttttgttggagttatctgattaaatttcttgtttgtaatgcccttgctaggtatgacacctttgttttgcgctgtgttggatggacaagagattactgtgaagtattttcttgacaaaggtgctgatccgaataagaaagatgcagcaggctttgctcctcttcatgaagctgcaaaaaaaggtaaggtatcacttcttttacatctgtgcatgtgtactacctttgtcatgtttatggtatgcgaagcttgcattgtataactttccctacaaaagctaaatgtaaaatctataatccacttatgtgtcttatagtaggggaaaacagctcaagagacaaatccgcttatctgcctccttttatgtaaatcttgccattttgttaggtttgtgcttgcttaggtggttttggtcaatactcgcaataatacttctgatttgtgacctgagaacacactagttctgaaacatacactttacttttgattcaatatgttaagtcagttctggaatgaacaattccaaaattaagaatgtctacaaaaaaaaaattattcttcactgtaacacaattccatgttgcccccccaacacttgttctcagggcacgttggaatagcacgactgttgttatctaaaggagctagtgttgatgtatcttcttctgaagggacacctcttcatgttgctgcctctaatggaaaatctagcactgtgcagattttattagagcaccgcgcaaatgtaagtaccataatttattttatttcatctttccatgtcgtttggttgaattcaaggctcaatttgtgatggtaccaaccgcctaatgtgttggtttagttcttggcaaaatatggaccaagttttttttgctcctgctgcaccttttttgtggatatgtagattcaacgatcacaagttgatgcaaaaagctttcgaaacagggtccaagtgttctatgtacctgctttggtttgctactgtcttaccttctgacttcgttgctacattgttcttgtgtttgtcgtttatgatgcccatatgtttcctagtatgggctgttctaggtcatgctggttgtaaatagtcgttaggcttcttatgatgctttttagatagtttattcatgatttcatgccttgcaatttgcaaatgaatgtgttgcattttccttgtgccttacttccatgttcattattgtactgagggctggctgatatcttggtgactttatctttgtccagatattgtgttatgaactgtttgttcttagtttcaggaatttatacagaagatatttctaatttctggatttgtattgacttgctccttttacctgctaattatatgcatttacttgggaataactttggtttctaaaaatgcagccaaacgtgatattaccagattgttatacaccattgaccgcagttctttctgccactcctgaaatagtgaatgaatctgagtgtttgaagtgcatgaaactccttgtgaaggtttgatacccaatcgatcctctctgtatctctatttccaaagtctcacgtgaaaaaaagtatatctatactcctttaaaagactccaatgatggtgctgaagggtgaatctgcattcagcccttcacctatccccactatctcctgacttgtggaaccatcaaaactgtgaccaaagtaatgtgacctaccgtgttacacataaaaaaaacaataataaagtgagttatatacagagaaaggggaagataccaaattccaaccattatgtgatttcttgaatatttgaaattgtaatgatgtgattttttttttataatccatagctacgcacgggcattcactactaaattcctatgttttatgtgagatattatgtcaacaacatattgttgtgtcatgtaacatttatctgcaggctggtgctatttataatcttgcaactcctgatactccattgaagatagcaactagaaatggcttaactgagtgtgttgcatacttgctggagatcaccacagttaaactaagtgaacatgtgagtaactcttgctaatttggtgcttttactttgtttttctcctaggacttgttgaacctataaacttgtggcaattattttctttcaaatgtaaaggaaagctctctctctctctctctctctctctctctctctctctctctctctgtgtgtgtgtttgtgtctatccttatttgtactgttttattggattttttttctttgatctgttggaaatgccttccaaaacccaacattagcaccagtcaccagtagtctggtagaacaaaactataccagagaggaacaacacgaaagcttttggagtttgtttgaatttgccttgttggcaccctgcgaaggacgagataatttgcatcccatgtttttctctttatgagaatgagaatacattatccaggtgtagagctttaccagttcaaatggtacattattactttaccaaccatctagacgtggattgaatcggccagggtcttataattgataacattacaagatttaatctgctgttttcaacagaactgttatcctgtactggtttttatgcaatacaaaataaatggtggaaggggacaatggtagaaacaagtttaggaatgggacgagtttatgattggacgtttgtgcaactaacctatctgtgtttacaaaataaggaagtatttttccttctccaaattctggtatttcctccaaaacatgtagaagggggtgaatcagacatgtaccacctctttagtctgtttgggacatcgacacaaatttgcaatacagatgtttgataattaccttttctaatcctatattaattattaaaatataacggcatgagagtgttttaatgaaaaatttaatgtcattttcaattatcaaatcttaatattgcttatgtattaatgaactaagattttgacgtttacctgaacatattctaaatctaaaacatcgtctatttgaaaacaggaggaattattttttagaactagaggacattgcaccttgaaactactttgttggtacataatacatctgtgttcttcactacatgtatgtaatgcaagcaactaaaggagatgatttattctctgtgctttcgtttgtaatcaccatgattcagttcattgttagaatgttagtggtattggtcgtaggaacactgcatctagtattctgtcaatttacagattttcagcttctatgttttttctcttctatcactacttatgttttcctaatgatttaggacaaaggaagtgatggagacagaaaatctaagctgaaattacatggtggaaaagcatttgaggagggggactatgctggtgcaatcatattttacaccgaggtatataaatgtgcattatatgattttacttcctttttgacttattactgctaagctgaaattgcatagtggaaaatcaataggaatgtgcagctgcccatgctatcctcattattgctaaatgctaatacatgatctgttagcggacattagctgaagacagaacaaaaagattatcgcaatttacaaactcagttacactggttccagttccttgcatctattactgctcagaccactataactattgtttaacttacgcagtttttatacaagtaattttatagtttttttttctcaaaaagataatacacatttattccattgttatagctggttcactgcaaaaaaaagttaaatgtaaactttgtgttcagcatttacactttcaagcctacagttattgattcttacgtactgttaaaaataaaagctctaatccaagaaatgccgttgacaaacacaacttcctgaaaatgccattctacaagcgtctttatcccagaaatgccatcgccgttaggtttctgttagtagccctccttttaagtgctataaaaagaccattttacccctacgagttgttgaaagatgattaaaacttatactctttcagtcaacgtacaataatttaggctgcgttctatttctccaacttcaatttcaacttccttgttttccattagcatgcttttcaaacttcaactttaacttccttgttttccattagtcaaaaatggtctttttatagcacttaacggagggatgctaatggaaacctaacggcgatggcatttctgggacaaaagtgctttgtatgatggcatttctaggaagttaggtttgttgatggcatttcttggattggggcgcttatcaatggcattttttagattttctaaaaaaaaaaaccttgcaatgatgatcacacttagtcatggaacatccatggcccttgacactcttctgtgaatacagtcagcgtggagggtggtcaagtgcactctggcaatgggaaaattgacatgttctttacagatataatttcttcaataatccaagccctaactataagcaacagagattatcacacgagaacccatctccacacatgccacatcacagaagcatgacagtctctgcatcccagttgacagtctctgcatcacagaagcatgacagtctctacatactatcatcacttctattgtctaggtactatggctgtgttaacaaggaagtggtgcagcgcaggaggcttatcacagtttggtatgatgcaggcaatgaaacttgatcctgcagatgccacactgtattcaaacaggagcctttgccatctgagaagtggtgcagcgcaggaggctttgctggatgctaatgattgcataaaactcaagccagagtggactaaaggtcactatcgcaaaggatgtgcccacatggcactcaaggtcagaaaagaaaaaaaaatccaagtttttcgttttgtgatacatcatttccctgtcattatcttatctatgtttttatattccaggaatacgaagaagcttgtactgcattcatggctggaacaaagctcaatcctttaaacgatgaaatgcaggatgcattttggtaatctttgtacctattttactttataacacagattttcttaaatgacctccgacacggttccatgaatcaaaatatgctaattcatgaatttttttcagttacttgtatgctgcgtgatatgtcagtgattatgcctctgactgaaaccaacccatatgttgacatttgcagggaggcagctaaaggaatgatgtatgaacatatggctggaaagcgcgtcagctcggttgattagaggtcatcggcgtgttcgtgctctgttctgtttcttttggacccgaatgtcagcttggatggtttaatttcgtgttagtacttgtgtctatatgatgtttctcgttggttaaggacacagcgaattggtggtggaacaagggctcgattccgcgtggaaccgatgttttcacataacatttcttgaaactgtacttaacgttacctgtttgcatgagcgtgttctttgatgattgtatcttggtg</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057434.1 RefSeq:Os03g0679800]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 3]]
 
−
[[Category:Chromosome 3]]
 

Latest revision as of 07:26, 14 May 2015

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Structured Information