Difference between revisions of "Os03g0679800"

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(Created page with "{{JaponicaGene| GeneName = Os03g0679800| Description = Tetratricopeptide-like helical domain containing protein| Version = NM_001057434.1 GI:115454596 GeneID:4333720| Leng...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os03g0679800|
 
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Description = Tetratricopeptide-like helical domain containing protein|
 
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Version = NM_001057434.1 GI:115454596 GeneID:4333720|
 
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Length = 10733 bp|
 
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Definition = Oryza sativa Japonica Group Os03g0679800, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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Please input expression information here.
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AP = Chromosome 3:27720161..27730893|
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CDS = 27723134..27723359,27723493..27723567,27724331..27724498,27725449..27725580,27726004..27726143<br>,27726791..27726901,27727320..27727439,27728689..27728790,27730074..27730244<br>,27730331..27730410,27730585..27730648|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008396:27720161..27730893
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source=RiceChromosome03
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008396:27720161..27730893
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source=RiceChromosome03
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggagaagaaggataagggaaggcaccgcggccgcgacggcggaggcggaggcggcggcggcggtggtggtggtggtggtggtgtggatcccgccggtggagggagcggaggaggagggccgggaatggggcggcgcgggagcgatgcgcgtggccagcaggcggaggcggcggccgcggcaatcagcggcatcgccacccgccttggcttcgggtgcaccatcaatgtcggcggcgggatgccaccgcagatggagttcctgatggcgtgtacggacggcgacgtcgcgcgcctcaaggaggtggttgatagcatggatgaggatgatcggcaatcgctcacctctgtgaggatggaggggtatgagccactgtttgaggcagcaagctcgggaaaaattgatctctgcaagtacttggtggaggagcttgggttcgatgtcaatgccgaagctaatcatgattccggtatgacacctttgttttgcgctgtgttggatggacaagagattactgtgaagtattttcttgacaaaggtgctgatccgaataagaaagatgcagcaggctttgctcctcttcatgaagctgcaaaaaaagggcacgttggaatagcacgactgttgttatctaaaggagctagtgttgatgtatcttcttctgaagggacacctcttcatgttgctgcctctaatggaaaatctagcactgtgcagattttattagagcaccgcgcaaatccaaacgtgatattaccagattgttatacaccattgaccgcagttctttctgccactcctgaaatagtgaatgaatctgagtgtttgaagtgcatgaaactccttgtgaaggctggtgctatttataatcttgcaactcctgatactccattgaagatagcaactagaaatggcttaactgagtgtgttgcatacttgctggagatcaccacagttaaactaagtgaacatgacaaaggaagtgatggagacagaaaatctaagctgaaattacatggtggaaaagcatttgaggagggggactatgctggtgcaatcatattttacaccgaggcaatgaaacttgatcctgcagatgccacactgtattcaaacaggagcctttgccatctgagaagtggtgcagcgcaggaggctttgctggatgctaatgattgcataaaactcaagccagagtggactaaaggtcactatcgcaaaggatgtgcccacatggcactcaaggaatacgaagaagcttgtactgcattcatggctggaacaaagctcaatcctttaaacgatgaaatgcaggatgcattttgggaggcagctaaaggaatgatgtatgaacatatggctggaaagcgcgtcagctcggttgattag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MEKKDKGRHRGRDGGGGGGGGGGGGGGGVDPAGGGSGGGGPGMG                    RRGSDARGQQAEAAAAAISGIATRLGFGCTINVGGGMPPQMEFLMACTDGDVARLKEV                    VDSMDEDDRQSLTSVRMEGYEPLFEAASSGKIDLCKYLVEELGFDVNAEANHDSGMTP                    LFCAVLDGQEITVKYFLDKGADPNKKDAAGFAPLHEAAKKGHVGIARLLLSKGASVDV                    SSSEGTPLHVAASNGKSSTVQILLEHRANPNVILPDCYTPLTAVLSATPEIVNESECL                    KCMKLLVKAGAIYNLATPDTPLKIATRNGLTECVAYLLEITTVKLSEHDKGSDGDRKS                    KLKLHGGKAFEEGDYAGAIIFYTEAMKLDPADATLYSNRSLCHLRSGAAQEALLDAND                    CIKLKPEWTKGHYRKGCAHMALKEYEEACTAFMAGTKLNPLNDEMQDAFWEAAKGMMY                    EHMAGKRVSSVD</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
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DNA = <dnaseqindica>2974..3199#3333..3407#4171..4338#5289..5420#5844..5983#6631..6741#7160..7279#8529..8630#9914..10084#10171..10250#10425..10488#gaccggtgatggactttactctattattatcattagttggtactgaatgtatgtctatgtaatttgtatatgttcatatttatttaacttttatgtatcgttgtcaccttattatcatcgggatttaaatttcaatctccataaatattacgcacacacaaatgtgtatagtgatggatgcgcgcacatgcgttctgtataaaaaaaatctattagacgtattaactcagtattgtcttttgaaaattacatgagtgataaccgattaatcactctttaactaagtaatatcagcacttaataccaaattctttttttttactgtctagtactacctccgtttcagttataagactttatagcattacccacaatcatatatatgttaatgaatctaggcatacacatatgtctagattcattaatatatatatatatatatatgaaacggaggaagtagcaaatatttgctcaaaattacaactattcaattaacggtcatctcgaaagtagaatttgtgaagaactctagtgcacgtccattacatagctactgcagaaaaaaatgttaatattagttcaccatattttcttcgatataataatactacacgtacgaaaaaaaatattaacatgggaaacacacacgtttctggcccaccccatgccatttacgcttaggcccttcacagtgtgtttgcgtggtgagtttctttgtgccgccagctcaaatgaatgcctacgtggcgagtaattgcgcatccctgcagagcatctcacctccacgcagggagatgagttttctcgctcttcgtgagtccacacatggcccacaaacgaatcgtgcctgcgttgttggggtcgagcctccatctcgtcgtctcctcgcgccacatcgaaaaacctattcccaaaatcaccctcccggccatggattgatccctcccatgccaccgattccgtcactcccgcacaaacctcgccatccccttcggagaaacgcacggaggccaacggagcaccgtcgatgtgaggtggatcctcgacttcgccgctggcgggctagatgatgacgacgacttcctcttccacgccacggaggagttggagtggagccactacaaggccaagcgtcgcgcttctgcctcaccgccgccgccatgaggcggatcctcaacttcgtcgccggtgggctggatgacgatgacaacttcctcatccacacagcggaggaaacggagtggagccactatgaggccaagcgtcgcactttcatcctgccacctccgccgtgaggtggatccttgacttcgccatcgacgggctggacaacgacggcaacttcctcttccacgcccaggagacagagcggagccatgtgcggatgacgaggaagacgacgacgacttcctcttcttcgagaagtggtgcatttgcggccgtgacgcctggttgagagaggcgatggcgatagggaggagagaggcgaaggagagggagctcaggcggtgggcaacaggttgagggaggcgatgccgatagggaagagagaggagaagggtagctgggggaattaatttattgggctggggcaccttcattgtcttggtcacctgtattgtgagctttgtagtctcgacactagctcgccccaatcaaagccatgcaaaagaagtaacatgcactgtggagttgaatggccttgggctgatttcgtgtgtcacataggctagagacacgcatagcgtggcttgcatagttattgcttaaaggcaaggtctgtggcttcgcagttgcaatcctttactatgtgcacgccacctacttaccctaatccccttagcccatatgcatatactatctccgtctctaaatgaagctatttttagcacagtgtcttgtctcaaaataaagctatttctccacctacctcctatcaactaatcacaaccattcttcttcagctgctttctcttttcaaccaattatgtattttctccaattattctcacggtctcatctaccttcttaatactcgtgtcaacctataaaatgtatatatattttgggacgggcgaagtataaggaaagaaaaatctccgtacgctgttgtctggtgacgatctccagttatccactgtatatataaaaggaaagtgaaggatgagctccaccattcggcagcctcatcatcatgcgtcttcttgctcgacaagcaccttaattagatcgtaatccctccattaaaaaaaaaaggagggcaacctaggaggggtgtgacccctccccaacgaatctacacaaattggttttttttagggagggaatagttattagtagtcacatctgcccaaaaaaaactatttttgaaagacctgaatttacaaagaaaaactctgcagcaaatgatttcacaattggatcacagagagagagaatcttgagctttatccacttgaggagaaatgcacggcgaagtgcagggcagcgaccatctcgttgacgctggtatatattttggtacacctaccattttacacgcggcacgtcccacaatctccgccctccgtctcatgcgaggcaaggccgcagctccccgctccatctaggccgtccgtacatacacgtgtcggccgatcgtgccactccggactttctctctccctcctctcccccgctgggtcaggctcctctaccttcaaaaggtcggtatgtatatgccttagtcactgacatgtggtcccgacgaaccatggacccacctgtcagtgactaaaggcaaggtgcttcggaggcggcggagagagatgatctcaatccctccgcgctgcgctgcgattaaagcggacgagacgtggccaccttccttcattctcctagaagccatcgcctcgtctctccgcttctcgcaagcaaaacccacatcgcccattcgcccccatcccattctgctcgccgtgctcgctgagctccatggagaagaaggataagggaaggcaccgcggccgcgacggcggaggcggaggcggcggcggcggtggtggtggtggtggtggtgtggatcccgccggtggagggagcggaggaggagggccgggaatggggcggcgcgggagcgatgcgcgtggccagcaggcggaggcggcggccgcggcaatcagcggcatcgccacccgccttggcttcgggtgcaccatcagtacgtgctaagcggccgctgtccgctgctccccgatcgtttctgctcgggctgattctgctctccggaagggatctctaatggtgggttgggtggtgttgttcgtcgtgcgtgcgtgcgtgcgtgtttgcagatgtcggcggcgggatgccaccgcagatggagttcctgatggcgtgtacggacggcgacgtcgcgcgcctcaagggtgagatcctacggctctaccccgcgcccgtcttactcccgaactgctcgtgcttcttcctgggataggggtttggttagggttttgagggcttttttttttagcttccgtgtggtggtgaactggtgatcgggaactttttttcagcattttctgtgccggctttgttgggggatattctactcaaatgtgttctcccatctttttgtgcatttgtgtaaacaattggatgagatggcttttagcctcatgcatcgtttctggttccgttacgatatgatcgtgtataccccgatcgtgcgtgttgttgatagaagtgtatgtgtgtttaatgcggcggagggttttcctgtctatttttggttcaaattggtactaatctagtaatctggatatgaatttgtttgtttgccattattcttaatagggattaataattactaataatacttctctttatgatgccatatttctgttagaggtctcttcctcttggttttgttttcttttgattaataattactaatactacttatctttatgatgccatatttctgtaagagatctcttccacttggttttgttttcttttctaagtgcttagatgtgattttcgtgaggtacttgtgtctccatttctctagaactttgatcttgttttatgcacatgcacacacaaaaaaaaacaacttctgcatgaactagaattacaatttgtgcaaatttgcgccttacttttcttttgaaactttcggtattgaagaggtggttgatagcatggatgaggatgatcggcaatcgctcacctctgtgaggatggaggggtatgagccactgtttgaggcagcaagctcgggaaaaattgatctctgcaagtacttggtggaggagcttgggttcgatgtcaatgccgaagctaatcatgattccggtatgtgcctttccaggttattgcattgttttattatgcttagtgcatctcccgtgagcaatgcaattgtaatgggagctgttgtatgtgaggaggttagtcttgatagggtcaggaactgtctttaccttatcatggagacattaactatagtgctgacatgctgctatctgaattggcacaccaatgtaacactgctatgtgaataaatccgtttagtactataatttgattcttaagtgttgtttcttgactagtcaccttttttaatgaaaacaaacaattctgtggcacctttgggacgtatgaatgtatgatgtcttgtgaggtagtattttctgagggagtactgcaagaatttccctgaagaaaactcaattcctgcactaatctagtaatttgttttttgtaacgggccatagataatataagaaaacatcatccaagaaagaatcacaatagcaaagtgttggtgatatgcctttttattcttatttgaaggattatctccttcagccttcctttttatattgcttttgcctactcttgattggtacagttgtgtctagacaatgcatgcagttcactttgtgaagctcatctattatgcacttgatttttcttctagttccttttgcgtggtatatacatgccatcaaattttggttctaagaacttgggaaatgggagttttgtatagttttaactatagtattatccttgttgatatgaacttattaagtggtgtttctgaatgattccattgtttaatattgcatgtcatataaatgcagtctgagctataagtatttcatgaagtgctcctttgcatatttggaattgtagcagctaatatttgtgcatttgcaaagctgttataccacaacactacctgtatcgttttgttggagttatctgattaaatttcttgtttgtaatgcccttgctaggtatgacacctttgttttgcgctgtgttggatggacaagagattactgtgaagtattttcttgacaaaggtgctgatccgaataagaaagatgcagcaggctttgctcctcttcatgaagctgcaaaaaaaggtaaggtatcacttcttttacatctgtgcatgtgtactacctttgtcatgtttatggtatgcgaagcttgcattgtataactttccctacaaaagctaaatgtaaaatctataatccacttatgtgtcttatagtaggggaaaacagctcaagagacaaatccgcttatctgcctccttttatgtaaatcttgccattttgttaggtttgtgcttgcttaggtggttttggtcaatactcgcaataatacttctgatttgtgacctgagaacacactagttctgaaacatacactttacttttgattcaatatgttaagtcagttctggaatgaacaattccaaaattaagaatgtctacaaaaaaaaaattattcttcactgtaacacaattccatgttgcccccccaacacttgttctcagggcacgttggaatagcacgactgttgttatctaaaggagctagtgttgatgtatcttcttctgaagggacacctcttcatgttgctgcctctaatggaaaatctagcactgtgcagattttattagagcaccgcgcaaatgtaagtaccataatttattttatttcatctttccatgtcgtttggttgaattcaaggctcaatttgtgatggtaccaaccgcctaatgtgttggtttagttcttggcaaaatatggaccaagttttttttgctcctgctgcaccttttttgtggatatgtagattcaacgatcacaagttgatgcaaaaagctttcgaaacagggtccaagtgttctatgtacctgctttggtttgctactgtcttaccttctgacttcgttgctacattgttcttgtgtttgtcgtttatgatgcccatatgtttcctagtatgggctgttctaggtcatgctggttgtaaatagtcgttaggcttcttatgatgctttttagatagtttattcatgatttcatgccttgcaatttgcaaatgaatgtgttgcattttccttgtgccttacttccatgttcattattgtactgagggctggctgatatcttggtgactttatctttgtccagatattgtgttatgaactgtttgttcttagtttcaggaatttatacagaagatatttctaatttctggatttgtattgacttgctccttttacctgctaattatatgcatttacttgggaataactttggtttctaaaaatgcagccaaacgtgatattaccagattgttatacaccattgaccgcagttctttctgccactcctgaaatagtgaatgaatctgagtgtttgaagtgcatgaaactccttgtgaaggtttgatacccaatcgatcctctctgtatctctatttccaaagtctcacgtgaaaaaaagtatatctatactcctttaaaagactccaatgatggtgctgaagggtgaatctgcattcagcccttcacctatccccactatctcctgacttgtggaaccatcaaaactgtgaccaaagtaatgtgacctaccgtgttacacataaaaaaaacaataataaagtgagttatatacagagaaaggggaagataccaaattccaaccattatgtgatttcttgaatatttgaaattgtaatgatgtgattttttttttataatccatagctacgcacgggcattcactactaaattcctatgttttatgtgagatattatgtcaacaacatattgttgtgtcatgtaacatttatctgcaggctggtgctatttataatcttgcaactcctgatactccattgaagatagcaactagaaatggcttaactgagtgtgttgcatacttgctggagatcaccacagttaaactaagtgaacatgtgagtaactcttgctaatttggtgcttttactttgtttttctcctaggacttgttgaacctataaacttgtggcaattattttctttcaaatgtaaaggaaagctctctctctctctctctctctctctctctctctctctctctctctgtgtgtgtgtttgtgtctatccttatttgtactgttttattggattttttttctttgatctgttggaaatgccttccaaaacccaacattagcaccagtcaccagtagtctggtagaacaaaactataccagagaggaacaacacgaaagcttttggagtttgtttgaatttgccttgttggcaccctgcgaaggacgagataatttgcatcccatgtttttctctttatgagaatgagaatacattatccaggtgtagagctttaccagttcaaatggtacattattactttaccaaccatctagacgtggattgaatcggccagggtcttataattgataacattacaagatttaatctgctgttttcaacagaactgttatcctgtactggtttttatgcaatacaaaataaatggtggaaggggacaatggtagaaacaagtttaggaatgggacgagtttatgattggacgtttgtgcaactaacctatctgtgtttacaaaataaggaagtatttttccttctccaaattctggtatttcctccaaaacatgtagaagggggtgaatcagacatgtaccacctctttagtctgtttgggacatcgacacaaatttgcaatacagatgtttgataattaccttttctaatcctatattaattattaaaatataacggcatgagagtgttttaatgaaaaatttaatgtcattttcaattatcaaatcttaatattgcttatgtattaatgaactaagattttgacgtttacctgaacatattctaaatctaaaacatcgtctatttgaaaacaggaggaattattttttagaactagaggacattgcaccttgaaactactttgttggtacataatacatctgtgttcttcactacatgtatgtaatgcaagcaactaaaggagatgatttattctctgtgctttcgtttgtaatcaccatgattcagttcattgttagaatgttagtggtattggtcgtaggaacactgcatctagtattctgtcaatttacagattttcagcttctatgttttttctcttctatcactacttatgttttcctaatgatttaggacaaaggaagtgatggagacagaaaatctaagctgaaattacatggtggaaaagcatttgaggagggggactatgctggtgcaatcatattttacaccgaggtatataaatgtgcattatatgattttacttcctttttgacttattactgctaagctgaaattgcatagtggaaaatcaataggaatgtgcagctgcccatgctatcctcattattgctaaatgctaatacatgatctgttagcggacattagctgaagacagaacaaaaagattatcgcaatttacaaactcagttacactggttccagttccttgcatctattactgctcagaccactataactattgtttaacttacgcagtttttatacaagtaattttatagtttttttttctcaaaaagataatacacatttattccattgttatagctggttcactgcaaaaaaaagttaaatgtaaactttgtgttcagcatttacactttcaagcctacagttattgattcttacgtactgttaaaaataaaagctctaatccaagaaatgccgttgacaaacacaacttcctgaaaatgccattctacaagcgtctttatcccagaaatgccatcgccgttaggtttctgttagtagccctccttttaagtgctataaaaagaccattttacccctacgagttgttgaaagatgattaaaacttatactctttcagtcaacgtacaataatttaggctgcgttctatttctccaacttcaatttcaacttccttgttttccattagcatgcttttcaaacttcaactttaacttccttgttttccattagtcaaaaatggtctttttatagcacttaacggagggatgctaatggaaacctaacggcgatggcatttctgggacaaaagtgctttgtatgatggcatttctaggaagttaggtttgttgatggcatttcttggattggggcgcttatcaatggcattttttagattttctaaaaaaaaaaaccttgcaatgatgatcacacttagtcatggaacatccatggcccttgacactcttctgtgaatacagtcagcgtggagggtggtcaagtgcactctggcaatgggaaaattgacatgttctttacagatataatttcttcaataatccaagccctaactataagcaacagagattatcacacgagaacccatctccacacatgccacatcacagaagcatgacagtctctgcatcccagttgacagtctctgcatcacagaagcatgacagtctctacatactatcatcacttctattgtctaggtactatggctgtgttaacaaggaagtggtgcagcgcaggaggcttatcacagtttggtatgatgcaggcaatgaaacttgatcctgcagatgccacactgtattcaaacaggagcctttgccatctgagaagtggtgcagcgcaggaggctttgctggatgctaatgattgcataaaactcaagccagagtggactaaaggtcactatcgcaaaggatgtgcccacatggcactcaaggtcagaaaagaaaaaaaaatccaagtttttcgttttgtgatacatcatttccctgtcattatcttatctatgtttttatattccaggaatacgaagaagcttgtactgcattcatggctggaacaaagctcaatcctttaaacgatgaaatgcaggatgcattttggtaatctttgtacctattttactttataacacagattttcttaaatgacctccgacacggttccatgaatcaaaatatgctaattcatgaatttttttcagttacttgtatgctgcgtgatatgtcagtgattatgcctctgactgaaaccaacccatatgttgacatttgcagggaggcagctaaaggaatgatgtatgaacatatggctggaaagcgcgtcagctcggttgattagaggtcatcggcgtgttcgtgctctgttctgtttcttttggacccgaatgtcagcttggatggtttaatttcgtgttagtacttgtgtctatatgatgtttctcgttggttaaggacacagcgaattggtggtggaacaagggctcgattccgcgtggaaccgatgttttcacataacatttcttgaaactgtacttaacgttacctgtttgcatgagcgtgttctttgatgattgtatcttggtg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057434.1 RefSeq:Os03g0679800]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 3]]
 
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[[Category:Chromosome 3]]
 

Latest revision as of 07:26, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

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Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information