|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0125700|
| |
| − | Description = Concanavalin A-like lectin/glucanase domain containing protein|
| |
| − | Version = NM_001058610.1 GI:115456949 GeneID:4334981|
| |
| − | Length = 10425 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0125700, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:1549387..1559811|
| |
| − | CDS = 1549609..1550260,1553410..1553947,1558932..1559799|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:1549387..1559811
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:1549387..1559811
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgtttgttgtgacaatgttgcagcttctcctcctactcctcctactcctctccatttcgcttgatgtttcacacctcattgctgaagcagcagcagcagcaaagccacctgtgtccttcagcttcaacttctctgatccatccacctacagcctagatgacctcctgttcgaaggcgacgcggccaagccgaaagacgggctggtcgacctcacctccggccgcagttgttatccctattgccccgccggccggatgtcgtacgctcacccggtgcagctctacgacgacaccaccggcggcgaaaaggtggtggtggccagcttctccacgaggttcaccttcacaatcagacccatcgacgacggtatcagaggggatggtctggctttcttcctggccagttacccatctaagctgccggccaactcgttcggcggcaaccttggactcatcaataacgggacgaccaccgccttcggttcggaccgattcatcgccgtcgagttcgacacatacaacaacactttcgaccccaagagcatcaaccacattggcattgacatcaactccgtcgtcagttccttgaacaccacactcttgcccaacttcagtctgaacgggacaatgacagcccacatcgaattcaacggcataacgcagatgctggtcgcctcactgtggctcgctggccgtccatggtctgcagcgcctgattatcaggtgagtttacgactgccagatccgatcacgtcgttgctcctgccgcaggtggccgtgggttttactggagccaccgcggacctcaaggagctcaaccagataatgttatggtcattcaactcaactcttacgctagtaaaccaagacagacgcaataaggcactgctttttggaggaccgatcatcggaggagctgttgcattggcgttagtgctgtggttcttgatctcttgtttgatgcagaagagggtacgtaatacctttggaaagggcacaggcggcgccaggcgattcgaatacgacgatttggccatcgcgactggcaatttctctgatgatcgcaagctcggagagggggcctttggggtagtgtacagcggattcctgaagcggttggagcgtgaagttgctgtgaagaaaatagtgagggagtccagccaagagcataaagacttcttcgccgaagtcagcactatcagcgaagctaagcacaagaatctcgtcaagttttttggttggtgctgccggggacacagctggaacattctccgtttcatgtgcagctgtttatggagcaacaataataaggagctcttccttgtatatgaattgatgaaaaatggcaacctcaacgactacttgtacaagagcgagtcagcagcagtactttcatggcaaacaaggtataaaatagccaaggacattgggtcaggcctgttgtacctacatcacgagtgctacccatatatcatacacagagatatcaaaccaggcaacgtactcttggacgacgatttcaacgccaagctcgctgattttggtctgtcaagggtcgcgaacccgaacaatgcaacgctgaagacaactgccataggctcacaaggatacattgatccacagtgcatgaaggatggtgaggtcagcttcaaccgtaactccgacgtgtacagcttcggcattgcccttcttgagatcgtctgcgcgaggaaacacagggagcagatctggggcctatacaaaagcggcggtgatgtcgtcgaggctgcagactcaaggctagccattggtgttgatggcgctgaaaggagggagatggagcgtgccatcatcttagggctctggtgctctgtcttcgagactaaacaccggcctaccatgctccaagcaatggatgtcctggagcgtgatgcgcagttgcctgaccttaacttaatcgtcaactctaatttatcttcaacagacgcatcgtcaagttcgccggtcgagaagagatatgactctgaggaggcaccgctggttgcaggcagctcttctagccagctagctggtcggtga</cdnaseq>|
| |
| − | AA = <aaseq>MFVVTMLQLLLLLLLLLSISLDVSHLIAEAAAAAKPPVSFSFNF SDPSTYSLDDLLFEGDAAKPKDGLVDLTSGRSCYPYCPAGRMSYAHPVQLYDDTTGGE KVVVASFSTRFTFTIRPIDDGIRGDGLAFFLASYPSKLPANSFGGNLGLINNGTTTAF GSDRFIAVEFDTYNNTFDPKSINHIGIDINSVVSSLNTTLLPNFSLNGTMTAHIEFNG ITQMLVASLWLAGRPWSAAPDYQVSLRLPDPITSLLLPQVAVGFTGATADLKELNQIM LWSFNSTLTLVNQDRRNKALLFGGPIIGGAVALALVLWFLISCLMQKRVRNTFGKGTG GARRFEYDDLAIATGNFSDDRKLGEGAFGVVYSGFLKRLEREVAVKKIVRESSQEHKD FFAEVSTISEAKHKNLVKFFGWCCRGHSWNILRFMCSCLWSNNNKELFLVYELMKNGN LNDYLYKSESAAVLSWQTRYKIAKDIGSGLLYLHHECYPYIIHRDIKPGNVLLDDDFN AKLADFGLSRVANPNNATLKTTAIGSQGYIDPQCMKDGEVSFNRNSDVYSFGIALLEI VCARKHREQIWGLYKSGGDVVEAADSRLAIGVDGAERREMERAIILGLWCSVFETKHR PTMLQAMDVLERDAQLPDLNLIVNSNLSSTDASSSSPVEKRYDSEEAPLVAGSSSSQL AGR</aaseq>|
| |
| − | DNA = <dnaseqindica>9552..10203#5865..6402#13..880#agttcacacatcatgtttgttgtgacaatgttgcagcttctcctcctactcctcctactcctctccatttcgcttgatgtttcacacctcattgctgaagcagcagcagcagcaaagccacctgtgtccttcagcttcaacttctctgatccatccacctacagcctagatgacctcctgttcgaaggcgacgcggccaagccgaaagacgggctggtcgacctcacctccggccgcagttgttatccctattgccccgccggccggatgtcgtacgctcacccggtgcagctctacgacgacaccaccggcggcgaaaaggtggtggtggccagcttctccacgaggttcaccttcacaatcagacccatcgacgacggtatcagaggggatggtctggctttcttcctggccagttacccatctaagctgccggccaactcgttcggcggcaaccttggactcatcaataacgggacgaccaccgccttcggttcggaccgattcatcgccgtcgagttcgacacatacaacaacactttcgaccccaagagcatcaaccacattggcattgacatcaactccgtcgtcagttccttgaacaccacactcttgcccaacttcagtctgaacgggacaatgacagcccacatcgaattcaacggcataacgcagatgctggtcgcctcactgtggctcgctggccgtccatggtctgcagcgcctgattatcaggtgagtttacgactgccagatccgatcacgtcgttgctcctgccgcaggtggccgtgggttttactggagccaccgcggacctcaaggagctcaaccagataatgttatggtcattcaactcaactcttacgctagtaaaccaaggtacctgaccatatccctactgttataaaaaattatgatatttttgtctatactttcatacgtcattcgtatttcatacgtcattcgtatttgagttagttttacagattgtttacttttgaaatcatttttaaaatactgcatgctaacttgtgacgagaatcggactcctaattgttttagtattcctgccaagccattgaaaagcaacgtacgtgatatggccaacatcccaaccaggattctgaattacatatcaatactttctttaaataaaaaataccatatactttttagacaaaataatctaccaataatatgtaaaatagtatgcaatgtgtgtatatgtatatgattcagttttttcccgtgctgatgtttttcttatcttgtactattttattgtttccttattttaaataccatctttttattgtctaccactccctccgtcccacaatataagagattttgagtttttgcttacaacatttgaccacttgtcttattcaatttttttttgcaaatataaaaaacgaaaagttgtgcttaaagtactgtagataataaagtaagtcacaaataaaataaataataatttcaaaaatttttgaataagatgagtggtcaaacattaaaagcaaaaactcaaaatcccttatattatgggacggtgggagtagtttttatgtaaatatgaggttttttgaaaagaaaaacagaaatgttaatgtctagaccaagtgggtcctcgtttagccagattccatagtttgaaagccatgtcgtcaaagactacttatagagatgcaattggatagtcctgctacatacataaaaacccacttgctagtttatttcctacacgatagtacaaaatttggatgaaaaacgaattagaagtggaataagcggataaaaaaaggaccgcttgcccaccccgcttgcatccctctagttgtgggccagcagaccagcacctccctggcctatgccagattcaagacacagggatgtccatcctccatccagaaatacattttcagaaagcccaaaagttaacactttggtcgagtcaaccgaccctagtcgaggtcatgccaccaaagctacttggaggcaacctttcctctgcgctgacgcatggagaataagttcatctgaggtcccttaacttgtcaacgaatcagattttcgtccttcaacctgaaaaccagatacaacgggtccctcaactattaaaaccagtacagatgaggcccctcggtgatttggatggcggttttggctgacgtggcgcttacgtggctaatttgactcggtcttcatctggcgtggcacttacgtggcaattcacactggaaaaataaaaaaccacatgggacccacatgttagtgtcacacccaagttaataaaaatttggtggggcccatatgtcattcccactcttcctcctcctcctcctccccatctcccctctcctctcttcaggtacgatggagagtcagcagccacgggggaggggggggggttggggggaatcagcaccaccaccaccgcgcgatgtcgagaaggcggcggcgctggcggcgatcccgacgaggaaccagaccccggtgtacggtacgacccgccgctgtcgtctgtagattgcacaagaccaaacaagaagcaaattggatcatcagcatggcttgccataagaatcaagaaacggttttgataagtggagacgaaggttagtacgtaccattgtagtagcgaaggtggtggtgatcgggaggtcgttggcggccatggtgatggacatgaacagctgtgtctcacgttcgagccccatccaggagcccttgctgctcttctcatgcggccactcgtcaaagatgtggcggagaggtttctgcgccgccgccgcatggttgtagcccgccggcttctctagccggaggccggcgcccaggaggaagctgtgctgctgctgccgcctctctttctcatcgtcatcttctttggaaagatcagtggcgtacggcgacgcagcggtgttgccataaccggcgcccgggaagagcggcgtggtgctctgcttgggctccatgccgagctgcttgaactgccactggccgtgtccaggcggcggcgtggtggtgctccctctcggtgccatcagagaagaaggcgtgctcgccgtacacctccttggtggcgtgcctgtacgcgtactccttgtggtccatggagtagtaggacggcggcaggtgagggtgacaggtgtcgaggtggaggtggaacgggctcacctgcgcgtggtacgccgcggcggcggcgggggttcacgtggtggccacggaatagggcccaccgcagagcgcttggtatggcgatgcgtcgtgcgctgccgggcggtcgtaggacgacgccggggaggagatggtggtggtggggacgacgaggacgacagcggcgggtcgtaccgcacaccagggttcggccactcatcgggatcgccgccaacaccgccgcacgggaataccagtgccgctgccgccgccttctcgccgtcgcatggtggtggtggtggtgattccccgaccgctgactctccgccttgtttgttgagaggggaggggagatggggagagagaggaggaggaagaagaaaaggagtgggaatgacatgtggggcccacgtgggccccaccatttttttattagtttgggtgtgacactgacgtgtgggtctcacgtgatttattatttttccggttcgaattgccacgtaagcaccacatcaaccaaaacccttatccaagccaccgagggacctcatctgcactggttttgacagttgggggacctgttgtatctggttcaaggacgaaaatcagattcgttaacgagtcatgggacctctcatgaacttattccgatgcatgggactggttggtctggccacccgggagctaggtcatggcgccattatggatttggggcccatgatctaggctgcccaggaactgctaggtgcaacttaaccaaaacagaagcagagtaggtagttcacctcttcccagagcacgccgtatggttaagctcggaaaggtgtcggatcccacacccaagcatcatcttgtgagaaccccttgctgacccagtaaggattatgtggcgtcctcgcaggtcagagaagggtggacgaatatctggttggataccacggcaccccaagatgtggtacgtcagccgcagagcctcgtattaactccacattctcttagggtgtgtttagtttacgtcaaaattagaaatttgattgaaattggaaagatgtaacggaaaaattgaaagtttgaagaaaaagtttggaattaaactcgaccttaggatgtttcatagcattaactcactgggatagtgggatacaccatatcggagtcccagtttcacacggactgcacgccgtggggtatggggcaggaggactaggagactacatgtgggcccggcgtagagacccgtcacatccagacctaattagcaggtagcctatgtggcatataagtgttgtgtgcactttattggtatcaccttactagttgagcaagagttgtgcaaatatataaggccttattagggttggcaacgggtcaggtttggggcgagttgggctggagcgcccctaaccccgaccccccccccaaacttctccatccgcccgtgtcctgaggtgagatatccggggtcaaaacaccccatggctctacccccccaggggatctggtgggtgagcgggcccgcatcacctgagtgctcgtttggaatcaagagcttcgtggtggcgacgtgacaccgagagcgaaccatcaattgtgagatagcagggagtataagcagcggcaccaggcccttcctcaactgggtgggcagggagccggggggcagagggggaaacgaggcaagtgacgaaaagaggagaggggaaaagcagttggcagtggagaggacagcgagtatgcgagagcgggtgacatgagcgttggcaccacgcgagtgcatcactgtaagggcgttcatagtgcgccacatgcatttgctgtgcctcacacaccagctagaccagaaataatgtttagttacatgtaccatagtgcaagtggcttattagtgagtcccacaagtaccaactttatcactttaccagcttttctttattccccctccctcactacttttccccaccacatagtgccgagccgggccgagctcctccaccgccgatgggaggggtggcagggcttggagcttgccggtgcaccacactcctctccctcttccaccctctccccgaaacaacagcgaggtcggcactcggaagcgggcggcggaggagctcggcgtcggctggcgagggcgccgtcgcttcaccacctccgcgggctagctcctctcgtcgccgccagataggatggcaagctcggcgcggatctggctcggattcagcgcccctactcctctccctctctagcgagcttcttcggcgcggaagtgacttctctggcgagcttcttcactctctctctctcctgctctgtggcatgtgtgtttctctaacaaaatttgctcaggttctcggagccaaaacaagccacacaaacctggtgaaaacatgggccccacctccttctctcctccacgcacacattgtgcttacgtggatagactttgccacacgccacacgccacgtgtatgcattgtgatcgccctaagagtttatgttgcttatgtcgcgatgacgtcaacatggtagtactgccataccttgatgtcagtacaacgtcagcacgcaaagtattttgtcgggcccgaatttctgcaattcaatctatatcaatccggcgagggtttcccctgtggctgtttcgcttgactgaagtatatactactgctcgttcaaaaataattctaataatttatatgtgcagacagacgcaataaggcactgctttttggaggaccgatcatcggaggagctgttgcattggcgttagtgctgtggttcttgatctcttgtttgatgcagaagagggtacgtaatacctttggaaagggcacaggcggcgccaggcgattcgaatacgacgatttggccatcgcgactggcaatttctctgatgatcgcaagctcggagagggggcctttggggtagtgtacagcggattcctgaagcggttggagcgtgaagttgctgtgaagaaaatagtgagggagtccagccaagagcataaagacttcttcgccgaagtcagcactatcagcgaagctaagcacaagaatctcgtcaagttttttggttggtgctgccggggacacagctggaacattctccgtttcatgtgcagctgtttatggagcaacaataataaggagctcttccttgtatatgaattgatgaaaaatggcaacctcaacgactacttgtacaagagcgagtcagcagcagtactttcatggcaaacaaggtacccatatatatactccctccttccctaaatatttgacaccgttgactttttaaatatgtttgactgttcgtcttattcaaaaaaactttgtgaaatatgtaaaactatatgtatacataaaagtatatttgacaataaatcatatgatagaaaaataattaataattacttaaattttttaaataagacggacggtcaaacatttttaaaaaagttaacggcgtgaaacattttaggatagagagagtatatatatctgcataaatactgtgttgctattatttatacgggatggttaaaattatatcgccacacttttcacttatttcaggcactttttctatacatgattgctctcccttctctatatttaagtatgattctatctgtcctatctactcttttatttaaataataaactactttaatactaactctctaatacattgtgtatcataaaatacaatgcaaatattgaaacttataatgtaattatagtttaaattttgaaatttacagtgtaattacaaatgtaagtgtatgtaataaatatagctactccgttaattaattatattagcaggtttctctatacaagtttccagctacttccttaatccgtaaaaaaatataatattagcctaaaaatctatcccacaattagtgtctttttagattgaggtccacttgacctcttagataccggtacatcgttttcattttcttcttgttttaactaccaaagtaacagaaatgctaaacttgtctttgacaatctgatcacaagtcatttagggatggagggagtagatttgaaagacatatttttttaattaacatacgatacttacctttgttttcataaatagcattatattttcaacacactaaaatcttccatttctataaattaatacaatttctattttcatataccaacatcgatttattcgatttgtatacattaactgttggagaaagagtcttcacccacggttggtaaccccctatagtcccggttatgcaaccggtaccacgaatccaagactaaagatgtgggtggaataaccgggactaagatgatagtcccggctaaagttttttttttcttttttccattgatgtttactgtttgcacctattgatttcaaccaaatcccaacaaatcataaaaaaatgcacaataaaatcatccaaaattcacatgtccatccacataatcatccataatccaaaatcattcacagatcatcccaatgtaaaaaaaaatctacaaatcattcacaaaatgtaaaaaaaaaaatcaacacaactgcaccaccggtggtacccgcctgccgcggcattgccgccgctgctgcctcatgcgccgctgccacggtcgtcgcccggcctcccctccctccagatctggtgaaggggaggccgccgcccgttgtcgccattgtcggaggagtggggaggggagggagaggacaggggaaggggaggaagggggaggaggagatggttagaaaatgagaggtctccgaaggagataaggacaaggctgccggctcggggctgctgcacgattttttatatattttggtcacagttggtgttactaattgggactaaagatccatctttagtcccggttggtaacaccaaccaggactaaaaataatgggggtctgacatgatttttaaatgggactaaaaaggatctttagtcccgactggtgttctagtgtgctttttaactggggctaatatgattttttttggcaatctagcaaagaccacttctccaatagtgattgatattgtctagacccatcataatataacaacacaaatcattatctttttctccaatttctaggcctcgatatcgatttctcttaacaatagactagtcattttttctctcaaagttatatgattccatttcgctgtacttaggataaaattattacattttgtaaataactgtaaaattctgctacttccatttttcaatctaatgttgttacattttattctaaactagaaaaaatatccatgcttcgtaacgggtgaagtctattttaatattattattgttatatggtttagttatgatgaaattcactatgagagttcgcttgaatatatatatatatattagaaaatcatgagctgcagttagaagtccgatcgtctcaagttagcatacgagtttttttaaacagatttcttatatgatttcatctgtattaccaaaagttaacgatcttaaaaaccgactcaaatacggatatgtattttcaaaagcaaacaaacttaaaaaccgactcatacatgaatgacgtaccaaaatacctgcaaaaacatgtttaatttttataatagcagagaaaatatatagattaaaactaaaacatacaattaaaaccgactcaaacacggacgacaaaccgcggaaacatcttcaatttttattatatatatatatatatagacacacacacacacatacgacatttgaaactaagtggtatttagttgtatttgcatgggagacttagtttattatgcctcacgatttattaattttgaaaatcataattaatgaacgtgtagtcgaagttggtacgggggaatattgttttaatagtttcaaaattctaggtgaaaaaaaatactgagttgtaatcggtttggataatttggaccgttctcaattatagtttttcaagatttagcgacttataatttttttcgaacgcgtaaaagaattgcacgtcaatatattagaagaaaagagttatagttacacgacgcaatcagccaaaccagcttatgctaggggaaaggaaaaaaaataaaaaaagctgaagcttagacacaaactcctaacaagtccccaaaagcggcaacgctagctagagaccatagatggccctccgagtggatggactccagaaccactgacgctgaggagagcgcagagcgacttataaattaggattatatatatataatcattagacataatgtgatcgattttctttgtttatgtgtgaacttctgttatgtgttcaattagtacatgtataattaattaagcatgttaatgatcaatccatgtagctaattaactacaattaatgttctaacaggtataaaatagccaaggacattgggtcaggcctgttgtacctacatcacgagtgctacccatatatcatacacagagatatcaaaccaggcaacgtactcttggacgacgatttcaacgccaagctcgctgattttggtctgtcaagggtcgcgaacccgaacaatgcaacgctgaagacaactgccataggctcacaaggatacattgatccacagtgcatgaaggatggtgaggtcagcttcaaccgtaactccgacgtgtacagcttcggcattgcccttcttgagatcgtctgcgcgaggaaacacagggagcagatctggggcctatacaaaagcggcggtgatgtcgtcgaggctgcagactcaaggctagccattggtgttgatggcgctgaaaggagggagatggagcgtgccatcatcttagggctctggtgctctgtcttcgagactaaacaccggcctaccatgctccaagcaatggatgtcctggagcgtgatgcgcagttgcctgaccttaacttaatcgtcaactctaatttatcttcaacagacgcatcgtcaagttcgccggtcgagaagagatatgactctgaggaggcaccgctggttgcaggcagctcttctagccagctagctggtcggtgagcatcatgcttgtcaaacaagctgagacaacaaaattcaataagcctggtgtatcaccaagacttccattctcacgagagctgcttagtgctgactgcacattctcatgttgatcagtttatcatgtaattgcctttttcaagaaacttataaacgaatagactacctaaatttgctgcgttgctttgtacgtagccagatatattaaacttatttcaaagt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058610.1 RefSeq:Os04g0125700]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
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Annotated Information
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Structured Information
