Difference between revisions of "Os04g0125700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0125700| Description = Concanavalin A-like lectin/glucanase domain containing protein| Version = NM_001058610.1 GI:115456949 GeneID:4334981|...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
{{JaponicaGene|
+
Please input one-sentence summary here.
GeneName = Os04g0125700|
 
Description = Concanavalin A-like lectin/glucanase domain containing protein|
 
Version = NM_001058610.1 GI:115456949 GeneID:4334981|
 
Length = 10425 bp|
 
Definition = Oryza sativa Japonica Group Os04g0125700, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
|
+
===Expression===
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
+
Please input expression information here.
AP = Chromosome 4:1549387..1559811|
+
 
CDS = 1549609..1550260,1553410..1553947,1558932..1559799|
+
===Evolution===
GCID = <gbrowseImage1>
+
Please input evolution information here.
name=NC_008397:1549387..1559811
+
 
source=RiceChromosome04
+
You can also add sub-section(s) at will.
preset=GeneLocation
+
 
</gbrowseImage1>|
+
==Labs working on this gene==
GSID = <gbrowseImage2>
+
Please input related labs here.
name=NC_008397:1549387..1559811
+
 
source=RiceChromosome04
+
==References==
preset=GeneLocation
+
Please input cited references here.
</gbrowseImage2>|
+
 
CDNA = <cdnaseq>atgtttgttgtgacaatgttgcagcttctcctcctactcctcctactcctctccatttcgcttgatgtttcacacctcattgctgaagcagcagcagcagcaaagccacctgtgtccttcagcttcaacttctctgatccatccacctacagcctagatgacctcctgttcgaaggcgacgcggccaagccgaaagacgggctggtcgacctcacctccggccgcagttgttatccctattgccccgccggccggatgtcgtacgctcacccggtgcagctctacgacgacaccaccggcggcgaaaaggtggtggtggccagcttctccacgaggttcaccttcacaatcagacccatcgacgacggtatcagaggggatggtctggctttcttcctggccagttacccatctaagctgccggccaactcgttcggcggcaaccttggactcatcaataacgggacgaccaccgccttcggttcggaccgattcatcgccgtcgagttcgacacatacaacaacactttcgaccccaagagcatcaaccacattggcattgacatcaactccgtcgtcagttccttgaacaccacactcttgcccaacttcagtctgaacgggacaatgacagcccacatcgaattcaacggcataacgcagatgctggtcgcctcactgtggctcgctggccgtccatggtctgcagcgcctgattatcaggtgagtttacgactgccagatccgatcacgtcgttgctcctgccgcaggtggccgtgggttttactggagccaccgcggacctcaaggagctcaaccagataatgttatggtcattcaactcaactcttacgctagtaaaccaagacagacgcaataaggcactgctttttggaggaccgatcatcggaggagctgttgcattggcgttagtgctgtggttcttgatctcttgtttgatgcagaagagggtacgtaatacctttggaaagggcacaggcggcgccaggcgattcgaatacgacgatttggccatcgcgactggcaatttctctgatgatcgcaagctcggagagggggcctttggggtagtgtacagcggattcctgaagcggttggagcgtgaagttgctgtgaagaaaatagtgagggagtccagccaagagcataaagacttcttcgccgaagtcagcactatcagcgaagctaagcacaagaatctcgtcaagttttttggttggtgctgccggggacacagctggaacattctccgtttcatgtgcagctgtttatggagcaacaataataaggagctcttccttgtatatgaattgatgaaaaatggcaacctcaacgactacttgtacaagagcgagtcagcagcagtactttcatggcaaacaaggtataaaatagccaaggacattgggtcaggcctgttgtacctacatcacgagtgctacccatatatcatacacagagatatcaaaccaggcaacgtactcttggacgacgatttcaacgccaagctcgctgattttggtctgtcaagggtcgcgaacccgaacaatgcaacgctgaagacaactgccataggctcacaaggatacattgatccacagtgcatgaaggatggtgaggtcagcttcaaccgtaactccgacgtgtacagcttcggcattgcccttcttgagatcgtctgcgcgaggaaacacagggagcagatctggggcctatacaaaagcggcggtgatgtcgtcgaggctgcagactcaaggctagccattggtgttgatggcgctgaaaggagggagatggagcgtgccatcatcttagggctctggtgctctgtcttcgagactaaacaccggcctaccatgctccaagcaatggatgtcctggagcgtgatgcgcagttgcctgaccttaacttaatcgtcaactctaatttatcttcaacagacgcatcgtcaagttcgccggtcgagaagagatatgactctgaggaggcaccgctggttgcaggcagctcttctagccagctagctggtcggtga</cdnaseq>|
+
==Structured Information==
AA = <aaseq>MFVVTMLQLLLLLLLLLSISLDVSHLIAEAAAAAKPPVSFSFNF                    SDPSTYSLDDLLFEGDAAKPKDGLVDLTSGRSCYPYCPAGRMSYAHPVQLYDDTTGGE                    KVVVASFSTRFTFTIRPIDDGIRGDGLAFFLASYPSKLPANSFGGNLGLINNGTTTAF                    GSDRFIAVEFDTYNNTFDPKSINHIGIDINSVVSSLNTTLLPNFSLNGTMTAHIEFNG                    ITQMLVASLWLAGRPWSAAPDYQVSLRLPDPITSLLLPQVAVGFTGATADLKELNQIM                    LWSFNSTLTLVNQDRRNKALLFGGPIIGGAVALALVLWFLISCLMQKRVRNTFGKGTG                    GARRFEYDDLAIATGNFSDDRKLGEGAFGVVYSGFLKRLEREVAVKKIVRESSQEHKD                    FFAEVSTISEAKHKNLVKFFGWCCRGHSWNILRFMCSCLWSNNNKELFLVYELMKNGN                    LNDYLYKSESAAVLSWQTRYKIAKDIGSGLLYLHHECYPYIIHRDIKPGNVLLDDDFN                    AKLADFGLSRVANPNNATLKTTAIGSQGYIDPQCMKDGEVSFNRNSDVYSFGIALLEI                    VCARKHREQIWGLYKSGGDVVEAADSRLAIGVDGAERREMERAIILGLWCSVFETKHR                    PTMLQAMDVLERDAQLPDLNLIVNSNLSSTDASSSSPVEKRYDSEEAPLVAGSSSSQL                    AGR</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
DNA = <dnaseqindica>9552..10203#5865..6402#13..880#agttcacacatcatgtttgttgtgacaatgttgcagcttctcctcctactcctcctactcctctccatttcgcttgatgtttcacacctcattgctgaagcagcagcagcagcaaagccacctgtgtccttcagcttcaacttctctgatccatccacctacagcctagatgacctcctgttcgaaggcgacgcggccaagccgaaagacgggctggtcgacctcacctccggccgcagttgttatccctattgccccgccggccggatgtcgtacgctcacccggtgcagctctacgacgacaccaccggcggcgaaaaggtggtggtggccagcttctccacgaggttcaccttcacaatcagacccatcgacgacggtatcagaggggatggtctggctttcttcctggccagttacccatctaagctgccggccaactcgttcggcggcaaccttggactcatcaataacgggacgaccaccgccttcggttcggaccgattcatcgccgtcgagttcgacacatacaacaacactttcgaccccaagagcatcaaccacattggcattgacatcaactccgtcgtcagttccttgaacaccacactcttgcccaacttcagtctgaacgggacaatgacagcccacatcgaattcaacggcataacgcagatgctggtcgcctcactgtggctcgctggccgtccatggtctgcagcgcctgattatcaggtgagtttacgactgccagatccgatcacgtcgttgctcctgccgcaggtggccgtgggttttactggagccaccgcggacctcaaggagctcaaccagataatgttatggtcattcaactcaactcttacgctagtaaaccaaggtacctgaccatatccctactgttataaaaaattatgatatttttgtctatactttcatacgtcattcgtatttcatacgtcattcgtatttgagttagttttacagattgtttacttttgaaatcatttttaaaatactgcatgctaacttgtgacgagaatcggactcctaattgttttagtattcctgccaagccattgaaaagcaacgtacgtgatatggccaacatcccaaccaggattctgaattacatatcaatactttctttaaataaaaaataccatatactttttagacaaaataatctaccaataatatgtaaaatagtatgcaatgtgtgtatatgtatatgattcagttttttcccgtgctgatgtttttcttatcttgtactattttattgtttccttattttaaataccatctttttattgtctaccactccctccgtcccacaatataagagattttgagtttttgcttacaacatttgaccacttgtcttattcaatttttttttgcaaatataaaaaacgaaaagttgtgcttaaagtactgtagataataaagtaagtcacaaataaaataaataataatttcaaaaatttttgaataagatgagtggtcaaacattaaaagcaaaaactcaaaatcccttatattatgggacggtgggagtagtttttatgtaaatatgaggttttttgaaaagaaaaacagaaatgttaatgtctagaccaagtgggtcctcgtttagccagattccatagtttgaaagccatgtcgtcaaagactacttatagagatgcaattggatagtcctgctacatacataaaaacccacttgctagtttatttcctacacgatagtacaaaatttggatgaaaaacgaattagaagtggaataagcggataaaaaaaggaccgcttgcccaccccgcttgcatccctctagttgtgggccagcagaccagcacctccctggcctatgccagattcaagacacagggatgtccatcctccatccagaaatacattttcagaaagcccaaaagttaacactttggtcgagtcaaccgaccctagtcgaggtcatgccaccaaagctacttggaggcaacctttcctctgcgctgacgcatggagaataagttcatctgaggtcccttaacttgtcaacgaatcagattttcgtccttcaacctgaaaaccagatacaacgggtccctcaactattaaaaccagtacagatgaggcccctcggtgatttggatggcggttttggctgacgtggcgcttacgtggctaatttgactcggtcttcatctggcgtggcacttacgtggcaattcacactggaaaaataaaaaaccacatgggacccacatgttagtgtcacacccaagttaataaaaatttggtggggcccatatgtcattcccactcttcctcctcctcctcctccccatctcccctctcctctcttcaggtacgatggagagtcagcagccacgggggaggggggggggttggggggaatcagcaccaccaccaccgcgcgatgtcgagaaggcggcggcgctggcggcgatcccgacgaggaaccagaccccggtgtacggtacgacccgccgctgtcgtctgtagattgcacaagaccaaacaagaagcaaattggatcatcagcatggcttgccataagaatcaagaaacggttttgataagtggagacgaaggttagtacgtaccattgtagtagcgaaggtggtggtgatcgggaggtcgttggcggccatggtgatggacatgaacagctgtgtctcacgttcgagccccatccaggagcccttgctgctcttctcatgcggccactcgtcaaagatgtggcggagaggtttctgcgccgccgccgcatggttgtagcccgccggcttctctagccggaggccggcgcccaggaggaagctgtgctgctgctgccgcctctctttctcatcgtcatcttctttggaaagatcagtggcgtacggcgacgcagcggtgttgccataaccggcgcccgggaagagcggcgtggtgctctgcttgggctccatgccgagctgcttgaactgccactggccgtgtccaggcggcggcgtggtggtgctccctctcggtgccatcagagaagaaggcgtgctcgccgtacacctccttggtggcgtgcctgtacgcgtactccttgtggtccatggagtagtaggacggcggcaggtgagggtgacaggtgtcgaggtggaggtggaacgggctcacctgcgcgtggtacgccgcggcggcggcgggggttcacgtggtggccacggaatagggcccaccgcagagcgcttggtatggcgatgcgtcgtgcgctgccgggcggtcgtaggacgacgccggggaggagatggtggtggtggggacgacgaggacgacagcggcgggtcgtaccgcacaccagggttcggccactcatcgggatcgccgccaacaccgccgcacgggaataccagtgccgctgccgccgccttctcgccgtcgcatggtggtggtggtggtgattccccgaccgctgactctccgccttgtttgttgagaggggaggggagatggggagagagaggaggaggaagaagaaaaggagtgggaatgacatgtggggcccacgtgggccccaccatttttttattagtttgggtgtgacactgacgtgtgggtctcacgtgatttattatttttccggttcgaattgccacgtaagcaccacatcaaccaaaacccttatccaagccaccgagggacctcatctgcactggttttgacagttgggggacctgttgtatctggttcaaggacgaaaatcagattcgttaacgagtcatgggacctctcatgaacttattccgatgcatgggactggttggtctggccacccgggagctaggtcatggcgccattatggatttggggcccatgatctaggctgcccaggaactgctaggtgcaacttaaccaaaacagaagcagagtaggtagttcacctcttcccagagcacgccgtatggttaagctcggaaaggtgtcggatcccacacccaagcatcatcttgtgagaaccccttgctgacccagtaaggattatgtggcgtcctcgcaggtcagagaagggtggacgaatatctggttggataccacggcaccccaagatgtggtacgtcagccgcagagcctcgtattaactccacattctcttagggtgtgtttagtttacgtcaaaattagaaatttgattgaaattggaaagatgtaacggaaaaattgaaagtttgaagaaaaagtttggaattaaactcgaccttaggatgtttcatagcattaactcactgggatagtgggatacaccatatcggagtcccagtttcacacggactgcacgccgtggggtatggggcaggaggactaggagactacatgtgggcccggcgtagagacccgtcacatccagacctaattagcaggtagcctatgtggcatataagtgttgtgtgcactttattggtatcaccttactagttgagcaagagttgtgcaaatatataaggccttattagggttggcaacgggtcaggtttggggcgagttgggctggagcgcccctaaccccgaccccccccccaaacttctccatccgcccgtgtcctgaggtgagatatccggggtcaaaacaccccatggctctacccccccaggggatctggtgggtgagcgggcccgcatcacctgagtgctcgtttggaatcaagagcttcgtggtggcgacgtgacaccgagagcgaaccatcaattgtgagatagcagggagtataagcagcggcaccaggcccttcctcaactgggtgggcagggagccggggggcagagggggaaacgaggcaagtgacgaaaagaggagaggggaaaagcagttggcagtggagaggacagcgagtatgcgagagcgggtgacatgagcgttggcaccacgcgagtgcatcactgtaagggcgttcatagtgcgccacatgcatttgctgtgcctcacacaccagctagaccagaaataatgtttagttacatgtaccatagtgcaagtggcttattagtgagtcccacaagtaccaactttatcactttaccagcttttctttattccccctccctcactacttttccccaccacatagtgccgagccgggccgagctcctccaccgccgatgggaggggtggcagggcttggagcttgccggtgcaccacactcctctccctcttccaccctctccccgaaacaacagcgaggtcggcactcggaagcgggcggcggaggagctcggcgtcggctggcgagggcgccgtcgcttcaccacctccgcgggctagctcctctcgtcgccgccagataggatggcaagctcggcgcggatctggctcggattcagcgcccctactcctctccctctctagcgagcttcttcggcgcggaagtgacttctctggcgagcttcttcactctctctctctcctgctctgtggcatgtgtgtttctctaacaaaatttgctcaggttctcggagccaaaacaagccacacaaacctggtgaaaacatgggccccacctccttctctcctccacgcacacattgtgcttacgtggatagactttgccacacgccacacgccacgtgtatgcattgtgatcgccctaagagtttatgttgcttatgtcgcgatgacgtcaacatggtagtactgccataccttgatgtcagtacaacgtcagcacgcaaagtattttgtcgggcccgaatttctgcaattcaatctatatcaatccggcgagggtttcccctgtggctgtttcgcttgactgaagtatatactactgctcgttcaaaaataattctaataatttatatgtgcagacagacgcaataaggcactgctttttggaggaccgatcatcggaggagctgttgcattggcgttagtgctgtggttcttgatctcttgtttgatgcagaagagggtacgtaatacctttggaaagggcacaggcggcgccaggcgattcgaatacgacgatttggccatcgcgactggcaatttctctgatgatcgcaagctcggagagggggcctttggggtagtgtacagcggattcctgaagcggttggagcgtgaagttgctgtgaagaaaatagtgagggagtccagccaagagcataaagacttcttcgccgaagtcagcactatcagcgaagctaagcacaagaatctcgtcaagttttttggttggtgctgccggggacacagctggaacattctccgtttcatgtgcagctgtttatggagcaacaataataaggagctcttccttgtatatgaattgatgaaaaatggcaacctcaacgactacttgtacaagagcgagtcagcagcagtactttcatggcaaacaaggtacccatatatatactccctccttccctaaatatttgacaccgttgactttttaaatatgtttgactgttcgtcttattcaaaaaaactttgtgaaatatgtaaaactatatgtatacataaaagtatatttgacaataaatcatatgatagaaaaataattaataattacttaaattttttaaataagacggacggtcaaacatttttaaaaaagttaacggcgtgaaacattttaggatagagagagtatatatatctgcataaatactgtgttgctattatttatacgggatggttaaaattatatcgccacacttttcacttatttcaggcactttttctatacatgattgctctcccttctctatatttaagtatgattctatctgtcctatctactcttttatttaaataataaactactttaatactaactctctaatacattgtgtatcataaaatacaatgcaaatattgaaacttataatgtaattatagtttaaattttgaaatttacagtgtaattacaaatgtaagtgtatgtaataaatatagctactccgttaattaattatattagcaggtttctctatacaagtttccagctacttccttaatccgtaaaaaaatataatattagcctaaaaatctatcccacaattagtgtctttttagattgaggtccacttgacctcttagataccggtacatcgttttcattttcttcttgttttaactaccaaagtaacagaaatgctaaacttgtctttgacaatctgatcacaagtcatttagggatggagggagtagatttgaaagacatatttttttaattaacatacgatacttacctttgttttcataaatagcattatattttcaacacactaaaatcttccatttctataaattaatacaatttctattttcatataccaacatcgatttattcgatttgtatacattaactgttggagaaagagtcttcacccacggttggtaaccccctatagtcccggttatgcaaccggtaccacgaatccaagactaaagatgtgggtggaataaccgggactaagatgatagtcccggctaaagttttttttttcttttttccattgatgtttactgtttgcacctattgatttcaaccaaatcccaacaaatcataaaaaaatgcacaataaaatcatccaaaattcacatgtccatccacataatcatccataatccaaaatcattcacagatcatcccaatgtaaaaaaaaatctacaaatcattcacaaaatgtaaaaaaaaaaatcaacacaactgcaccaccggtggtacccgcctgccgcggcattgccgccgctgctgcctcatgcgccgctgccacggtcgtcgcccggcctcccctccctccagatctggtgaaggggaggccgccgcccgttgtcgccattgtcggaggagtggggaggggagggagaggacaggggaaggggaggaagggggaggaggagatggttagaaaatgagaggtctccgaaggagataaggacaaggctgccggctcggggctgctgcacgattttttatatattttggtcacagttggtgttactaattgggactaaagatccatctttagtcccggttggtaacaccaaccaggactaaaaataatgggggtctgacatgatttttaaatgggactaaaaaggatctttagtcccgactggtgttctagtgtgctttttaactggggctaatatgattttttttggcaatctagcaaagaccacttctccaatagtgattgatattgtctagacccatcataatataacaacacaaatcattatctttttctccaatttctaggcctcgatatcgatttctcttaacaatagactagtcattttttctctcaaagttatatgattccatttcgctgtacttaggataaaattattacattttgtaaataactgtaaaattctgctacttccatttttcaatctaatgttgttacattttattctaaactagaaaaaatatccatgcttcgtaacgggtgaagtctattttaatattattattgttatatggtttagttatgatgaaattcactatgagagttcgcttgaatatatatatatatattagaaaatcatgagctgcagttagaagtccgatcgtctcaagttagcatacgagtttttttaaacagatttcttatatgatttcatctgtattaccaaaagttaacgatcttaaaaaccgactcaaatacggatatgtattttcaaaagcaaacaaacttaaaaaccgactcatacatgaatgacgtaccaaaatacctgcaaaaacatgtttaatttttataatagcagagaaaatatatagattaaaactaaaacatacaattaaaaccgactcaaacacggacgacaaaccgcggaaacatcttcaatttttattatatatatatatatatagacacacacacacacatacgacatttgaaactaagtggtatttagttgtatttgcatgggagacttagtttattatgcctcacgatttattaattttgaaaatcataattaatgaacgtgtagtcgaagttggtacgggggaatattgttttaatagtttcaaaattctaggtgaaaaaaaatactgagttgtaatcggtttggataatttggaccgttctcaattatagtttttcaagatttagcgacttataatttttttcgaacgcgtaaaagaattgcacgtcaatatattagaagaaaagagttatagttacacgacgcaatcagccaaaccagcttatgctaggggaaaggaaaaaaaataaaaaaagctgaagcttagacacaaactcctaacaagtccccaaaagcggcaacgctagctagagaccatagatggccctccgagtggatggactccagaaccactgacgctgaggagagcgcagagcgacttataaattaggattatatatatataatcattagacataatgtgatcgattttctttgtttatgtgtgaacttctgttatgtgttcaattagtacatgtataattaattaagcatgttaatgatcaatccatgtagctaattaactacaattaatgttctaacaggtataaaatagccaaggacattgggtcaggcctgttgtacctacatcacgagtgctacccatatatcatacacagagatatcaaaccaggcaacgtactcttggacgacgatttcaacgccaagctcgctgattttggtctgtcaagggtcgcgaacccgaacaatgcaacgctgaagacaactgccataggctcacaaggatacattgatccacagtgcatgaaggatggtgaggtcagcttcaaccgtaactccgacgtgtacagcttcggcattgcccttcttgagatcgtctgcgcgaggaaacacagggagcagatctggggcctatacaaaagcggcggtgatgtcgtcgaggctgcagactcaaggctagccattggtgttgatggcgctgaaaggagggagatggagcgtgccatcatcttagggctctggtgctctgtcttcgagactaaacaccggcctaccatgctccaagcaatggatgtcctggagcgtgatgcgcagttgcctgaccttaacttaatcgtcaactctaatttatcttcaacagacgcatcgtcaagttcgccggtcgagaagagatatgactctgaggaggcaccgctggttgcaggcagctcttctagccagctagctggtcggtgagcatcatgcttgtcaaacaagctgagacaacaaaattcaataagcctggtgtatcaccaagacttccattctcacgagagctgcttagtgctgactgcacattctcatgttgatcagtttatcatgtaattgcctttttcaagaaacttataaacgaatagactacctaaatttgctgcgttgctttgtacgtagccagatatattaaacttatttcaaagt</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058610.1 RefSeq:Os04g0125700]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 4]]
 
[[Category:Chromosome 4]]
 

Latest revision as of 07:45, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information