|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0379300|
| |
| − | Description = Methyltransferase type 11 domain containing protein|
| |
| − | Version = NM_001059123.1 GI:115457975 GeneID:4335621|
| |
| − | Length = 10174 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0379300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:18541403..18551576|
| |
| − | CDS = 18541503..18541904,18542673..18542774,18542966..18543032,18543614..18543792,18543876..18544136<br>,18545408..18545491,18545601..18545648,18545738..18545802,18546933..18546981<br>,18548216..18548456,18549707..18549828,18550026..18550106,18550178..18550252<br>,18550492..18550634,18550746..18550896,18550999..18551181|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:18541403..18551576
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:18541403..18551576
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcgaccacgccggcggcagcggcagcggcggcggcggcggggggcgcggcgatcctcgacactctcggggacttcacctcgcgggagaactgggacaagttcttcgcgctccgcggcaccggcgacagcttcgagtggtacgcggagtgggacgacctccgcgccccgctcctctccctcctccatggcggcggcggcgcggagggcggaggcaaggccccggagatcctggtgcccgggtgcgggagctcggtgctctcggagaggctctacgacgccgggttccgccgcgtcaccaacgtcgacttctcccgcgtcctcgtcgccgacatgctccgccgccacgcccgcgcgcgcccggagatgcgctggcgcgtcatggacatgaccgacatgcagttcacagatggatcatttgatgtcatacttgataagggtggactggatgctcttatggagccagaggctggcacaaaactagggatgaaatatctaaatgaggcaaagagagttttgaaatcaggagggaaatttgcttgccttacccttgcagaatcccatgtcctagctctgcttttgtctgagttcaggtttggatgggatatgagcattcaagctataggtaatgaatcctctaagtctgccttccagactttcatggtggtcatggtaaaaggaaagatgggtgtagtacacccaatacaatcactattagaccaatctggtaaattctgtaacatgaaacaggcaaatgatgtgattcattctcttgagaaggaaaacaccatccgggagtcatacagttctggtgttgatattactttgtcattacgcgatcttcagttaggagctgtaggagatctgaaggtgattatcccaggacgacgaaggatgttcattcttggtgatcagggaaattcactttattgctataaggctgttctcttggatgccagaaagcgaactgagacctttgtatatcattgtggagtttttattgtgcctaaggttcgagcacatgaatggctttttgcttcagaagaaggacagtggcatgttgttgaaagtgcaaaggctgctcgtctaattatggtattcttggatagcagacatgcaaatgctgacatggatgttatcaagaatgatttatctccccttgttaaggatctggaacctggaaatcctgaagaggaagctcgtataccgttcatgatggctggtgatggtgtgaagcaacgagagattctgcaagaggtaacttcagaaataactggtcctatggttgtggaagatgttgtttatgaaaataatgatgaagaccaaagttctatgactgaaaagatgttccggcgccttatatttaaaagaaattctggcttagtgcaatctgaagcattgcttgtcaaagattccaccagtgacaaggcagatgaaaacaacaaaaaatcaccttcagcatccaaaaaaaggaggaaccagaaaaaaggtccctcaggatccaagaccgttctgaggattgatcatagctaccttggtagctcttatcacagcagtatcatatctggcttttctttaattgcatctgctctggattctgctgcagtagctggaacaaaagttagcacaaccgtcatagggcttggagcagggactttaccaatgtttcttcgtggatgtctccctttcctagatattaaggttgtggagttagatcccttggtagaggaggtggcaaacaaatattttggcttttcaacagatgagcaattgcaggtgcatttgggagatggaatcaaattcatagatgatattgctgttgcaaacagtagggctaccacccagcagctcatgtctactggcaatgagaacaatgcagttaaaattcttattgttgatgttgattcatctgacgtgagctctgggttgtcttgccctcatgcaaactttgttgaggattcttttcttctggcggtgaaaaagttccttgatgaaggtggtctgtttatcatcaatttagtctcgcgatcatccgcagtcagggaaatggttgtttcacgactgaaagcagcctttgagcacctatattcactacatctcgaagaagatttaaatgaagttttatttgcaaccccaagtgaaagatgcctggataacaacaatatggatgaggctgtggccaaactgaaggccatgctgaaattcccagtgaatgtagaatcagatatgaagaagttgcagaagctgcagtag</cdnaseq>|
| |
| − | AA = <aaseq>MATTPAAAAAAAAAGGAAILDTLGDFTSRENWDKFFALRGTGDS FEWYAEWDDLRAPLLSLLHGGGGAEGGGKAPEILVPGCGSSVLSERLYDAGFRRVTNV DFSRVLVADMLRRHARARPEMRWRVMDMTDMQFTDGSFDVILDKGGLDALMEPEAGTK LGMKYLNEAKRVLKSGGKFACLTLAESHVLALLLSEFRFGWDMSIQAIGNESSKSAFQ TFMVVMVKGKMGVVHPIQSLLDQSGKFCNMKQANDVIHSLEKENTIRESYSSGVDITL SLRDLQLGAVGDLKVIIPGRRRMFILGDQGNSLYCYKAVLLDARKRTETFVYHCGVFI VPKVRAHEWLFASEEGQWHVVESAKAARLIMVFLDSRHANADMDVIKNDLSPLVKDLE PGNPEEEARIPFMMAGDGVKQREILQEVTSEITGPMVVEDVVYENNDEDQSSMTEKMF RRLIFKRNSGLVQSEALLVKDSTSDKADENNKKSPSASKKRRNQKKGPSGSKTVLRID HSYLGSSYHSSIISGFSLIASALDSAAVAGTKVSTTVIGLGAGTLPMFLRGCLPFLDI KVVELDPLVEEVANKYFGFSTDEQLQVHLGDGIKFIDDIAVANSRATTQQLMSTGNEN NAVKILIVDVDSSDVSSGLSCPHANFVEDSFLLAVKKFLDEGGLFIINLVSRSSAVRE MVVSRLKAAFEHLYSLHLEEDLNEVLFATPSERCLDNNNMDEAVAKLKAMLKFPVNVE SDMKKLQKLQ</aaseq>|
| |
| − | DNA = <dnaseqindica>101..502#1271..1372#1564..1630#2212..2390#2474..2734#4006..4089#4199..4246#4336..4400#5531..5579#6814..7054#8305..8426#8624..8704#8776..8850#9090..9232#9344..9494#9597..9779#atctcatttccactcgtgccattttcgctcccaagtcccaaaccacggcgacccgccgccatccatccccctaaacccctagctagggtttccaaccaccatggcgaccacgccggcggcagcggcagcggcggcggcggcggggggcgcggcgatcctcgacactctcggggacttcacctcgcgggagaactgggacaagttcttcgcgctccgcggcaccggcgacagcttcgagtggtacgcggagtgggacgacctccgcgccccgctcctctccctcctccatggcggcggcggcgcggagggcggaggcaaggccccggagatcctggtgcccgggtgcgggagctcggtgctctcggagaggctctacgacgccgggttccgccgcgtcaccaacgtcgacttctcccgcgtcctcgtcgccgacatgctccgccgccacgcccgcgcgcgcccggagatgcgctggcgcgtcatggacatgaccgacatgcaggtacggccacgaccccccgtgcgcttcatccgcttcggtgtatttgttggctgctttggagctaggattttcgtagtgctgttgcggtgtgtgtgggggcgaatctatacggaattgcggctctgcttggaattgattttgtactggaccacgcaattaggcattagccaccgaattgaggataaatcggcaccgaccatttttggtactcgttgtctttagtggaatggttaactgaatttcgtatctgatggctagaatggaggctcttgctaatgccatgctcttggaggttgatgagtaggcaatgctgagaattcaagcatatttggttgattgtgaatgcttctgaacatattgtcatgcaaatcatctaaatgaatgaacgcatgtggtgtgttattttcacccttgggcagcttgcaccagatgctcatgattttagtttgtcgcgtgtgtgacatgatggatcaagcaaattacagaagggggcaactcatttggttgaaaccctgaatgagcctagtggaataattgtggggcttttatgttttatgcttcttacaatggtagcgaactgttacattctcaatgttttctgtacacaatacacttttaaagagttcttttcattttcccttgccattttttaagaattagagggttcttcacttcttctgactgagtgtttttttttttgttttctgtttgtccatcaacctgtaactcgatatcttattgaacctacctgatgcatcaaattgccagttcacagatggatcatttgatgtcatacttgataagggtggactggatgctcttatggagccagaggctggcacaaaactagggatgaaatatctaaatgaggtattaagtgtaacatgtttccaaatttaaatactgatgtttgatgttgtaatagaaataccattttgaattttaaatggtgcatgttagtgttgcattcttgattttttatatatctaatggaatttatggaaatgttttgttctttatgttatgtctgacttagtaagcgcctcttgcttgtcttacaggcaaagagagttttgaaatcaggagggaaatttgcttgccttacccttgcagaatcccatgtcctaggtgagcttctgtcaattattgagagaactgattacctgacaattgaagtcttttcctgttacatagttacacttaggacctccaatatgtcttacagttttgaagtattctagtgaatatactttcaaattttcagctatacttcttttgttttgcttttagttgaccaaagatatcgagtattgatttttcatgtttccatagaaactttgatcattgcttttatgactgcatcaatattcttcttatacatcttagtgactttgactattcttaataaatatacttccaatgtttccagggaagctttaataactatattagcgtgaaactataagttaaaaaaaaaaactttatgattatgaatgtgtttttaacaatagaaataatggtgttttcttctcttctttcttggaaatcaatgatgtactttttgcagataatctgcatactttcatagatattgtggtctgaatcaaaatttcaaaactgttccacaaatgatataaataaccaatttaatatctcggaggttattttcgtaattgactaacagtgttttgctcctttctctcctgcagctctgcttttgtctgagttcaggtttggatgggatatgagcattcaagctataggtaatgaatcctctaagtctgccttccagactttcatggtggtcatggtaaaaggaaagatgggtgtagtacacccaatacaatcactattagaccaatctggtaaattctgtaacatgaaacaggtactgctatattcttctgatggaaaacaaataattaattcctgtcggtactcttactcttatattttatattggtgctgcaggcaaatgatgtgattcattctcttgagaaggaaaacaccatccgggagtcatacagttctggtgttgatattactttgtcattacgcgatcttcagttaggagctgtaggagatctgaaggtgattatcccaggacgacgaaggatgttcattcttggtgatcagggaaattcactttattgctataaggctgttctcttggatgccagaaagcgaactgagacctttgtatatcattgtggagtttttattgtgcctaaggtcagctatatactgtcaatatgcagctttgatttttgttgcagtacttactgttatttaattttactcaatcccctactgatcattttcttgatctactatgtcgtataagaaacaagcatatgataaaatgatcagaaaatatacttgaaaatcaaattacactagatggaatagaaaactgtgttgatcaatgttatttagggtccacatgtatccatgttgttcacttcctataccaatttcaatgcatatatcaaatactacatcattttcaaaatatatgacgccgttgacttttctcataacatttgttttattaaaaaagttagtataaatatgtaatactataagttaagattatagtctctttgatgataaaacaggtcacaacaaaataaatgatacttatataattttttgaataagacgaatggtcaaatgtcatgcgaaaagtcaacgacatagtacattttgggatggaaggagtattgtgttacttttttaagcacatgcctgttgcccgctgaaatgtgattctgtattgcatacttggtgagggatgcatccagtttattcaaattgtatgaaacacaaatcttgaggccacccaatctatttccttcttggcatgatttatctttttatgtggttttgacctgccgtaccttacattgaagtattacgagggagatggtaaaccttcatgcaaatatgttaattgtgcatgttgcaatggaaagattatgtggtgcaacagaagtttaggatttgggacaagtaacatcactgcaagataataattaacttactagtacacaatatggtaaatagtattaaaagaggtgtgcgctgcatattatagggaaattgtaacggaagaaataaattatacatagctgaatagtatggagatgtgcgcatagtggggatatagctgagagtggggatagggtaatcactcctgtagtcctgctcccatccccatttatagtggaaggtatgggacgcacttcaaatttgtaaatttgagtcttgtataggcttaaagtctttctctatctctattctcaccgttttgttcctctgctttatgtctattgtggttctgcatcaaaaggtttgctatgtgggtactagctaggcttcttttgacaaccagagttgctgagtagccctctagtatttgtgttctcttccattaagctatatgaaagccaaaacagttactctggcactcatgattgctaatgaacataatttgctttcaggttcgagcacatgaatggctttttgcttcagaagaaggacagtggcatgttgttgaaagtgcaaaggctgctcgtctaattatggtacaactgtgatggatgcaagcctagtgtgattataatttgatatttgggatcactttacagcattttcattgcttatatttgtgccatgaacttacctttaccttaggtattcttggatagcagacatgcaaatgctgacatggatgttatcaaggtgattgtttgcaaattaggatgttgtgcaaattccacaggctaatacacactatcctaatgttattgttttgcttctttttttttcagaatgatttatctccccttgttaaggatctggaacctggaaatcctgaagaggaagctcgtataccgtaggtgtcaatgcattctatttgaaattttgtcagcatttttttcctagaattcgtgtttccatgttaaggaaataaaaatgtcaatttctttggaagtacaactgtaggaaaaggatcctaatgaaaatgtcaaattattaagacaaactttacagtttggtagttagtaaaagaggggtttatcagtgcccacgattatagtaaggctttgcaattggtccagcatgaaaactcaatctagttctaatagaaattcgctgatgccaaattagtctggtgcacctatcctgtatgtagtcctatttgagacagcatgatcatcaccattattatatctcctggtgctgtttgtttatttcaatgcacattccctggttattatatatattacatccccttatttgttatgatatgtttaccctagatccataggttaatttgatgtaatagcgtcacaaaatagtatcatattattgcttttttaggactgtaaccaaatccatctttgttttgggcatgggtgtatcttttcctatattacacatttacacgtgttatctaggctgggcaacgagttgttaatggccttggttccaaattggaacgagttgatttcatatataagtataaaacaatatagttattgcgtacttggacttagtaatagtggcagaggtacgtggtggaatgctatcagctataagcttgttaggttgatttactaatcaattacagtaacacgacagaacacggaattgattattgtaggtacatcatggaatactattgccttgtacataagtaaatataattttacaggacaagtgttaatcatacctcagtaatgcaaataatgttaccttgtgctgagaaatgacctgaaatgcatgccaactatatatggtcagatcgggaaggagctaaccagttgttgcgtttgtaatagtacacacaagcaaaatcatatgtcagtggtgcactacatcccacttggaatccttttttttttttggggggggggggtcattatgagcttcttgaattttctcaatcaactttcctaccataaaatgcaaaaccaaaaaatgtttcttaatcgtggttgtggtgtaaaaacaactatgcaggttcatgatggctggtgatggtgtgaagcaacgagagattctgcaagaggtaattattaaaatatattttccgtggaatgcctgttctagtggcaattttgtttgcccttgccctaaggactaatgttatccagattgaccatcatctatataatattggagtcttttgcagacttggtgccattcttttgcataagcataattacgggcttactgtcaaattatagtggttgaaacctcttcaagtcatttagcgcgtatttcgtccatggtctatcatgaacgatagatgcaatggaactgtgtccacttgataaatttttccaagtataggagtccctctgatacctcacttcagcaaaaccgttgctgggcagaagaacagtgaagttgatgtttggacatcattagttgatggactaagtttaggtttttgtttaaagatgataattaggtagcctagtcttccataatctggctcctacgaaggacctatcttatgctcttaatctactgattttcatctatcattatttaccagtatgttatctctatcagttttgaatgatcccaagaatgagaaactatatattattcatttgggtatcctaatgggtggtttctgttcatagaaagacaaggtttagactgaaaataacacaattttttttttcaaaggaaagaaggattgaaaataatttctatacatcaactttgtactggatgcatactaagttctaagagtcagtccattctatgccatcaacaaagcgctggttatgccattggcaaaactcagttctacaatataccatcgaacaactcattttcttccttatatgtcatcgccgttagtcaaacgctgttaagagaggaaaagtgaacattttacccctaggataaatttgagattttgcacaatgccatgtcgcattaaataatcttggatgataaaaagaaaagcggtttctatttttcatcaatgagaagaaatagtggatcatgaccaatgaaatccatgaggacgcatgataccctagaggcaaaatgaacattttcttgcccttaatggaatttgactaactattaactagcaacgatagaatgtaagggagaaactagttgtttgatggtatattatagaaccgagctttgtcagtgctatattgtagaacctcgaaccacctgattcacttgctagttgcaattgcattttcttatcactgttgacttgtatgcatgccctaccttctctaatggactgcttgcgttgaattttgaaggtaacttcagaaataactggtcctatggttgtggaagatgttgtttatgaaaataatgatgaagaccaaagttctatgactgaaaagatgttccggcgccttatatttaaaagaaattctggcttagtgcaatctgaagcattgcttgtcaaagattccaccagtgacaaggcagatgaaaacaacaaaaaatcaccttcagcatccaaaaaaaggaggaaccagaaaaaaggtccctcaggtatgtcatgcaaatttaaagtttcaacttactggtatgctagattgattgctatacttgtggtaggaataatccatgctagggtgtcacacccagaaattcacgaaccataattccaagctgaatgtgcattaaaccatagtggaaaaaaccggaccggtagacgacccggtcaccctgctggttcaccggtctgacggtccaaccgtgaaccggccggtcgaaccacggttcactaactatatgtaacatatgtgtttgcatacaagcacatagatctgtatggtaggatggctatgggagttggcttgcaaacaaccgaccaggggtcgactccccacaagcgcgcgcttccttcaatttttgctaaaaaaatcaagcccgcagacaagtctggcccaaaacatgctactgggccgttgttgtggcccattcattcaccggacttgtgttagtccggtccgactgaaagcggtttattgcccggttcatcacaaaaccggccggttcaggcagtctgaagcggttcaattgcatgtccggtctttctattcgaccgaaccgtgccaacctctggttccggtttttttcggttgaaccgccggtccggtccggttttttacactaggcattaaacccctgtccaggacaggctagggtacacaaacgacaatgttgatatacataatccacgtcttacaaacagttgaagtcttacaaattcagcgcaaaaataaaggcgggctaaactaggataactgaattcaaattgtctgatctgaattaaaacaactgaaagggaaagcagttcaactcctaattaaaggcagccataccacaagcaactcgaaatggtgcgtgattaacccacaagcaaagcaaacctaagcatggaaactaacaaccaagcaaactaaggaaaacgataaaactaagggttatgactctagtgctcggagtgacgcaccagagtccgactccaacgaccacaagagccgttccgagcactagtgtcgttacccttagctttgcttgtaactgaccaagaatgagtatctgtgatcagggatatttttgttaatctgtagtttgaaatactggttgaaggtgccaacctgattcttaatatttcactgcttactgaagttaatgatcttttattgacaataagttcgtaaaaaagtaggcatgatataatgtttgatcttcctctatttatgagccatttgttggtctttcataatatgtaggatccaagaccgttctgaggattgatcatagctaccttggtagctcttatcacagcagtatcatatctggcttttctttaattgcatctgctctggattctgctgcagtagctggaacaaaagtaagtagcatgatctcgttctacatgagcaattcaactttcaagtctatggacctagagtgttaaagattgttcttttatgagaaatgaaatttctaattttaatgcctggatgcttgcagtggcctttgttattttgttcttagcttacagcataaaccatttctaatattcaaaccctataatgcattttgtaggttagcacaaccgtcatagggcttggagcagggactttaccaatgtttcttcgtggatgtctccctttcctagatattaaggtaaaagaaagaaaaatgtcttatcttagttgattggttgaatggggtgatcagcttctctaaccttacaggttgtggagttagatcccttggtagaggaggtggcaaacaaatattttggcttttcaacagatgagcaattgcaggtgagttattgtactatcaaaggattaaaaatgcatattattgtagaacctaagttgtttcaaaagataggaaagaactctccaagtgtcaagctatacataagacttcttggaggttttattagttacttaaagattctttttcgtttgggaaatatactgtagctaacatccatacaagtatagcatgcttgcaatagtgtcccaatttattttgatcgtccctttccctatgttaggtgcatttgggagatggaatcaaattcatagatgatattgctgttgcaaacagtagggctaccacccagcagctcatgtctactggcaatgagaacaatgcagttaaaattcttattgttgatgttgattcatctgacgtgaggtatttgctctcaacatttcgatgactgccctctacccttatatgtttgttctactacaaaacaatttcatatcgacccattctgatttcgagttcatggctgcttcacagctctgggttgtcttgccctcatgcaaactttgttgaggattcttttcttctggcggtgaaaaagttccttgatgaaggtggtctgtttatcatcaatttagtctcgcgatcatccgcagtcagggaaatggttgtttcacgactgaaagcagtaagatgggagtccagacacacatttttttttttttacataataggatacaacagatttctgagtacagttatttagctaaaataacaactttctttgtaggcctttgagcacctatattcactacatctcgaagaagatttaaatgaagttttatttgcaaccccaagtgaaagatgcctggataacaacaatatggatgaggctgtggccaaactgaaggccatgctgaaattcccagtgaatgtagaatcagatatgaagaagttgcagaagctgcagtagtcggctcagctgcagcgaaatgccattcattttgtcctcagcgaactcaggaaaatgctggtgtaacttccttcaactataggaccaaattacctgtaccaaaggcataggtacaccttccttcgtgttgtattgccaaattttgttcttgtcaaaccgtgccgcgatctgtatagagctacaataggcgagaagatgtctgtcagttttggtctccattgctgagagcctttctaaatcattgacagtgtacgttatagaagtgactcccaaaagttggccagtgcatagaattgcattgcagcttctgagccgtcagtaggttggcagacctgaccgtaacatgtttactacacaattgctactgctggatacgcatgtgattttcattgttt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001059123.1 RefSeq:Os04g0379300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
