Difference between revisions of "Os04g0390000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0390000| Description = Similar to 2-oxoglutarate dehydrogenase, E1 component| Version = NM_001059173.2 GI:297602610 GeneID:4335673| Length ...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os04g0390000|
 
−
Description = Similar to 2-oxoglutarate dehydrogenase, E1 component|
 
−
Version = NM_001059173.2 GI:297602610 GeneID:4335673|
 
−
Length = 6761 bp|
 
−
Definition = Oryza sativa Japonica Group Os04g0390000, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
+
Please input expression information here.
−
AP = Chromosome 4:19196735..19203495|
+
 
−
CDS = 19197491..19198981,19199377..19199603,19199691..19200023,19200995..19201241,19201869..19201997<br>,19202080..19202295,19202369..19202492,19202970..19203208|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008397:19196735..19203495
+
 
−
source=RiceChromosome04
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008397:19196735..19203495
+
 
−
source=RiceChromosome04
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>gtgaggaacctggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccgcccccggcggttcgccgctcctgtgccccgcgccgtgccgctctcgcgcctcaccgacagcttccttgatggcaccagcagcgtgtaccttgaggagctccagagggcgtgggaggctgatcccacctctgtcgacgagtcctgggacaatttctttcggaactttgtcgggcaggctgcaacttcgcctggcatatctgggcagacaattcaggaaagcatgaggttgctgcttcttgtgcgagcgtaccaggtgagtggtcacctgaaggctaagcttgatcctctcgcgctagaggagcggcctatccctgatgttctggaccctgcgttctatgggttctctgaggctgatctggaccgggagttttttcttggtgtgtggaggatggctgggttcttgtcggagaatcgccctgtgcagacactccgttctgtgttggagcggcttgagcaagcttactgtggtaccattgggtatgagtacatgcacatacctgacagggagaaatgtaattggctgagggataggattgagacggtcaatgcaagggagtactcctacgaccgtcgccaggtcatgcttgataggctcatgtggagcactcagtttgagagcttcttggcacagaaatggacgaccgccaagcggtttggtcttgaaggtgcggagacactgatccctggcatgaaggagatgtttgacagggcagctgatcttggtgtagagagcattgtgattggtatgccacacagaggtaggctgaatgtcttgggaaatgtcgtgaggaagcccttgcgacagatcttcagtgagtttagtggtggtaccaagcctgccgaagaaggggagggcttgtatacagggactggagatgtcaaataccatctaggaacttcatacgataggcctaccagaggtggaaagcatatccatctgtctctggttgcaaacccaagtcatttggaagcagtcgatcctgttgttgctgggaagaccagagcaaaacagtactattctaatgatcttgacaggaccaagaatttaggagtcttgttgcatggtgatggaagcttctcagggcagggtgtagtgtatgaaaccctgcatctcagtgctcttccaaactacactactggtgggacaattcacattgtggtcaataatcaggttgctttcactactgatccaagggcagggaggtcttcgcagtattgcacagatgttgctaaagcattggatgctccaattttccatgtgaatggtgatgacttggaggcagtggttcatgtctgtgagcttgctgcggagtggcggcaaacatttcattctgatgttgtggtggatattgtatgctaccgccggtttgggcataacgagattgatgagccttccttcacccagcctaaaatgtacaagataattaggaaccaccagagtgctcttgagatataccaaaacagacttttagaatctgggaagatatccaaggaagatattgataagatgcagaagaaggtcagcactatcttgaatgatgaattccaaaacagcaaagaatatattcccaataagagagactggctctcagcttactggactggattcaagtcaccagaacagatttcacgaatccgaaatactggtgtcaagccagagattctaaaacgtgttggagaagccatgactactctgcctgaaaatttcaagccccacagggctgtcaaaaagatttttgagctgcgtcgtcagatgattgagacgggcgaaggcattgattgggctgttggtgaagcacttgcttttgcaactcttataattgagggaaaccatgttaggttaagtggtcaggatgttgagaggggtacattcagccaccgccatgctgttatccatgaccaggaaactggagagcaatactgtccgcttgataatcttgttatgaatcaagatgaggaactatttactgtaagcaacagttccctgtcagagtttgctgttttgggctttgaattgggctattccatggagaatccaaactcactggttttatgggaagcccagtttggtgatttttccaatggagctcaagtgatatttgatcagtttctgagtagtggagaggcaaaatggctccgccagaccggtcttgtcgtttgccttcctcacggatatgatggtcaggggcctgaacattccagtgcaaggttggagcgtttccttcagatgagtgatgacaacccttatgttattcctgagatggatccaactctgaggaagcaaatccagcagtgcaactggcaagttgtgaatgtcacaactcctgcaaactatttccatgtcctgcgtcgccagattcaccgggacttcagaaagcctttgattgttatgtctccaaagaatctccttcgacacaaggactgcaaatcgaatctttctgaatttgatgaccttgctggtcaccctggatttgacaagcaaggaacccggtttaagcgtctaattaaagatcagaacaaccataaggaccttgaggagggaatcaagcgtttagttctctgttctggaaaggtatattatgagttggacgaagaaagaagaaaaaaggagcgtgatgatgttgctatatgtagagttgaacagctctgtccattcccatatgacctcatccagcgcgagttgaagcgatatccaaatgccgagattgtttggtgccaagaggaacccatgaacatgggggcgtacagctacatcaatcctcgcctcctgaccgcgatgagggcgcttggtcggggcacgatagacgacatcaaatacgttggaagggccccatctgcagccaccgcaacaggtttctactccgtccatgtgcaggagcaaaccgagcttgtgcagaaggcactgcagcgagaccctatcaactctccattttga</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>VRNLARAPANPFAGPAPRYFHSTRPRRFAAPVPRAVPLSRLTDS                    FLDGTSSVYLEELQRAWEADPTSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLL                    LVRAYQVSGHLKAKLDPLALEERPIPDVLDPAFYGFSEADLDREFFLGVWRMAGFLSE                    NRPVQTLRSVLERLEQAYCGTIGYEYMHIPDREKCNWLRDRIETVNAREYSYDRRQVM                    LDRLMWSTQFESFLAQKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHR                    GRLNVLGNVVRKPLRQIFSEFSGGTKPAEEGEGLYTGTGDVKYHLGTSYDRPTRGGKH                    IHLSLVANPSHLEAVDPVVAGKTRAKQYYSNDLDRTKNLGVLLHGDGSFSGQGVVYET                    LHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALDAPIFHVNGDDLE                    AVVHVCELAAEWRQTFHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKIIRNHQSALEI                    YQNRLLESGKISKEDIDKMQKKVSTILNDEFQNSKEYIPNKRDWLSAYWTGFKSPEQI                    SRIRNTGVKPEILKRVGEAMTTLPENFKPHRAVKKIFELRRQMIETGEGIDWAVGEAL                    AFATLIIEGNHVRLSGQDVERGTFSHRHAVIHDQETGEQYCPLDNLVMNQDEELFTVS                    NSSLSEFAVLGFELGYSMENPNSLVLWEAQFGDFSNGAQVIFDQFLSSGEAKWLRQTG                    LVVCLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDPTLRKQIQQCNWQVVNVTT                    PANYFHVLRRQIHRDFRKPLIVMSPKNLLRHKDCKSNLSEFDDLAGHPGFDKQGTRFK                    RLIKDQNNHKDLEEGIKRLVLCSGKVYYELDEERRKKERDDVAICRVEQLCPFPYDLI                    QRELKRYPNAEIVWCQEEPMNMGAYSYINPRLLTAMRALGRGTIDDIKYVGRAPSAAT                    ATGFYSVHVQEQTELVQKALQRDPINSPF</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
−
DNA = <dnaseqindica>757..2247#2643..2869#2957..3289#4261..4507#5135..5263#5346..5561#5635..5758#6236..6474#ctctctctctctctctctctctctctctcgccaaccaatctcctcccccctcctttcctcctcctcccgaaccaccggaatccgacgcggcgccgccgcgccaccccgttccgccggctctcttcctcacctctcctccccaggagatcgtcaatctcctcggtaagcaagcaagcactcgggtggttcgagctgtgccctgcgatcgatccccttgcggagttgcgacgcgaatatggtgtctaagtttgatgttacgttagggtttggttggttcgtttgcggcggtgttggtgcctcgtgtgtgatgtgtgtgtgtgtgtgcgggggttaatttggttcgttcgtggatgggggggctgatctggcatcgtgacggtgtcggtgttaattgttaaacctttttcatttctgttccttaacttttgccgtgatgggggtgatcttggagcgctgcgctggtgtaaatcgggctagattttggaggaacgtcacagtgaaattcgtcaataatcgtgtcgttttcctgtcgaatttttggcgcacggtttgatgctgttggggacctaacctaacctcgtgttcttgatgcgatgcaggtcaggtgtttgatcgattgcctgtgggaagcatatgggcggttagattcgtgaagttgagaggaatcagaagacgggaattgtttgaggggactgaatttgatctggaaaatggggtggtttcgggctgcgtccggattggctcgggtggcgctgagtgaggaacctggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccgcccccggcggttcgccgctcctgtgccccgcgccgtgccgctctcgcgcctcaccgacagcttccttgatggcaccagcagcgtgtaccttgaggagctccagagggcgtgggaggctgatcccacctctgtcgacgagtcctgggacaatttctttcggaactttgtcgggcaggctgcaacttcgcctggcatatctgggcagacaattcaggaaagcatgaggttgctgcttcttgtgcgagcgtaccaggtgagtggtcacctgaaggctaagcttgatcctctcgcgctagaggagcggcctatccctgatgttctggaccctgcgttctatgggttctctgaggctgatctggaccgggagttttttcttggtgtgtggaggatggctgggttcttgtcggagaatcgccctgtgcagacactccgttctgtgttggagcggcttgagcaagcttactgtggtaccattgggtatgagtacatgcacatacctgacagggagaaatgtaattggctgagggataggattgagacggtcaatgcaagggagtactcctacgaccgtcgccaggtcatgcttgataggctcatgtggagcactcagtttgagagcttcttggcacagaaatggacgaccgccaagcggtttggtcttgaaggtgcggagacactgatccctggcatgaaggagatgtttgacagggcagctgatcttggtgtagagagcattgtgattggtatgccacacagaggtaggctgaatgtcttgggaaatgtcgtgaggaagcccttgcgacagatcttcagtgagtttagtggtggtaccaagcctgccgaagaaggggagggcttgtatacagggactggagatgtcaaataccatctaggaacttcatacgataggcctaccagaggtggaaagcatatccatctgtctctggttgcaaacccaagtcatttggaagcagtcgatcctgttgttgctgggaagaccagagcaaaacagtactattctaatgatcttgacaggaccaagaatttaggagtcttgttgcatggtgatggaagcttctcagggcagggtgtagtgtatgaaaccctgcatctcagtgctcttccaaactacactactggtgggacaattcacattgtggtcaataatcaggttgctttcactactgatccaagggcagggaggtcttcgcagtattgcacagatgttgctaaagcattggatgctccaattttccatgtgaatggtgatgacttggaggcagtggttcatgtctgtgagcttgctgcggagtggcggcaaacatttcattctgatgttgtggtggatattgtatgctaccgccggtttgggcataacgagattgatgagccttccttcacccagcctaaaatgtacaaggtatacattttttttcttacctgattaagtccagcatgatgccatgatttatgtttctttcgtctgaatattcatttcagtcctgttctttaatcctgtatgatgtctccagaactagtttatcttgatttcatccgtaatattctctctaccatatgagtgtgaatgtgtgatatctcaataacaccatagagtttatcaactaatagacaaaaaaagagatcaacttttgacttctgagtattttaccccattaagacctggaacaatttttttaatgtgttcagaaactattgtaagttagaaatgatactgattatggataattaaatgctggtattttccatggtacatttgtttgtttacatttggataattgtttgtatttgtatcagataattaggaaccaccagagtgctcttgagatataccaaaacagacttttagaatctgggaagatatccaaggaagatattgataagatgcagaagaaggtcagcactatcttgaatgatgaattccaaaacagcaaagaatatattcccaataagagagactggctctcagcttactggactggattcaagtcaccagaacagatttcacgaatccgaaatactgggtaaacaattctttacttctgatttttggacgattcctgtgtttcccctccatgttttgagtaagtagctttattgcaatcatgcagtgtcaagccagagattctaaaacgtgttggagaagccatgactactctgcctgaaaatttcaagccccacagggctgtcaaaaagatttttgagctgcgtcgtcagatgattgagacgggcgaaggcattgattgggctgttggtgaagcacttgcttttgcaactcttataattgagggaaaccatgttaggttaagtggtcaggatgttgagaggggtacattcagccaccgccatgctgttatccatgaccaggaaactggagagcaatactgtccgcttgataatcttgttatgaatcaagatgaggaactatttactgtaagcaacaggtatgaattatgatccaccgacacattatagtttggatgtttttttatatcgtgcaagtttagcttatgaattgtgcaagtataggtgaccaacaaataagaaaaaagaaatcaggtgattggcaaatagcaaagctgttgttggttatgtaagtggctgtcccacttgtacatgtacacacacaacacaagtacatatgttatcactgctcatcaaatatgccttgagctagttgcaaactttcaaatttcagatcaccatccttagcctttgcacgcatatcagggcgctttggacggctaagatagcacatgccctaatcccacatgtgacatggtagtacaagtaggtttttgtgctactccatttttactaaaacttctatctgaaatgcttaaggttcgacttgttagccttgggagttctactgccaatttatctgctgatcatgacactagtaatttgagcagcccacatattgctgctaggtatgaggtgctgtaggcacatgtaacatgtatgagatcattgctgggatattaaataagctttattttcgtgcattgtaagtactgagatgatggagataattctcggcaataaatattttgatttttttttatttaaaaggttggtttttacatctcacaattttctcaaactgtgcaaaaaataatttgaagcgaaatagaaaatttaaccaaggtctacatcatgttaacttacaaatttagtaagtaataattaagttaaatcagccttttgatgttctctatggagtctacttcgataggtgatactgcctccacttcattcatgattattatggtttaatccagatttattgttacatgatctggtactatttgaacttatgggatgcctccacttcattcatgattatttctttcctttatggttgatctggttttgttgttacataatctgatgtattcaagaatcttaacagttccctgtcagagtttgctgttttgggctttgaattgggctattccatggagaatccaaactcactggttttatgggaagcccagtttggtgatttttccaatggagctcaagtgatatttgatcagtttctgagtagtggagaggcaaaatggctccgccagaccggtcttgtcgtttgccttcctcacggatatgatggtcaggggcctgaacattccagtgcaaggttggagcgtttccttcaggtaccatttttctgtttctgactgcagaaatgtcgtcactagtatcttgtgttagtattagttgcattatcttatcatctgttgacataaaaggaacacaacataacagcactgcttttcacagtgttgctttctcataaactgtgttggcattgccatagttctacagttcatatattttgtataatatatgctgatgccatgtggtgatacaaagttgcggacttttaacacttcactgaaaattcagcattttttttgtttttgtttgtttattagttttccttttgtcataacttgatgactgcgcatagaaatattccgcactgtgactaaccatattatattgtactaactctacttttgacttggaaactgcaccacatcatccatttgtacatcatttattctgcaaggtaatggttgtacacatatgagaaatccatgtcatggatgattgtagttcccctacacttcagaaattgtctgtctggcaaaactagaaagaaatatatgactagaagaactttttttggctgtactatgaacttatttcccaatctgatgcgtgtgctgattttttaaattatctacatcttttttttaacttcaataattgcattgtagatgagtgatgacaacccttatgttattcctgagatggatccaactctgaggaagcaaatccagcagtgcaactggcaagttgtgaatgtcacaactcctgcaaactatttccatgtcctgcgtcgccaggtgaagtatcgtcatagtttttttctacttccctcctgcatgaccatcttcaagtgcatgaaagtatgtcttctatttctagattcaccgggacttcagaaagcctttgattgttatgtctccaaagaatctccttcgacacaaggactgcaaatcgaatctttctgaatttgatgaccttgctggtcaccctggatttgacaagcaaggaacccggtttaagcgtctaattaaagatcagaacaaccataaggaccttgaggagggaatcaagcgtttagttctctgttctggaaaggtaggcattttttcaacctgtacaatcgccgcttcaaaaagtcattatattacttatatttctattattacaggtatattatgagttggacgaagaaagaagaaaaaaggagcgtgatgatgttgctatatgtagagttgaacagctctgtccattcccatatgacctcatccagcgcgagttgaagcgatatccaagtatgttaaaacatgaaatagatcttgttcaaatatctacttcaagttgctatatagagtactcttctttataaaacatgcaaaagcatcagttcatcattgcaccgaggagagaaatatagggtactcttatcatcgcattcagtggtgatgatctagatggcatgagagcatggaatatagaggattgcagcatgcaagacaaaaggatcttatggaacaggagaggaaatatggaaatgataagagaacgatagataccagatgaagctacctgcaatcctatagcatggtccattaaccctaaaaggctgtagagaactaacttgttagctagaacatgttttccaggcattagcattttctaacccaagaagacaggaatcagaacagtaatttcatttgttctcctgatggatcctggtaaacaacaaatgagctaacaatatacaatctttgctgttttgtgccgtgtagatgccgagattgtttggtgccaagaggaacccatgaacatgggggcgtacagctacatcaatcctcgcctcctgaccgcgatgagggcgcttggtcggggcacgatagacgacatcaaatacgttggaagggccccatctgcagccaccgcaacaggtttctactccgtccatgtgcaggagcaaaccgagcttgtgcagaaggcactgcagcgagaccctatcaactctccattttgaacctgtagattttatttggatagccgtgggtaatcaaacctttgatccaacagcaaaattattgcctgtgcagccatttggtgaataatccgcttcggatgtttggtaccgcatgagagaaaccatttgaaacccatgttgggatgcatcattttgtgtttcttaacatcaaattaaaccaagttgcatccaatgcttacttgaggagtagaaataagtcgatgctgaatactgatcttccatgtttttgtgatactacattcttattactgcgcctttcaccatcc</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001059173.2 RefSeq:Os04g0390000]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 4]]
 
−
[[Category:Chromosome 4]]
 

Latest revision as of 07:52, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information