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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0403400|
| |
| − | Description = Tyrosyl-DNA phosphodiesterase family protein|
| |
| − | Version = NM_001059233.1 GI:115458195 GeneID:4335738|
| |
| − | Length = 5617 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0403400, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:20030885..20036501|
| |
| − | CDS = 20030911..20031902,20032002..20032136,20032249..20032393,20032550..20032831,20033064..20033325<br>,20033473..20033639,20033730..20033840,20034756..20034807,20034890..20034999<br>,20035109..20035237,20035536..20035625,20035715..20036275|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:20030885..20036501
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:20030885..20036501
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggaggcggagccgccgccggagaaccgccacgacgaccaccacccctccacttccggcggaggcctgggctacttccacctccgcctcctctgccccgccgcgccactcctcctcctcctccgctccgaccgcctctactccctctccctctcccgccgccgcggcccccgcctccgcctcctcgcctcccctcgccgccgccacggccggcgacggcgggccctcctcctcagcacatcgggctgcgccctccgcctcacccaccgctcctccagcgccgacgccgtgcgcgtcaacggccggcccctcctccgcggtgggtgcccggccgatctggccgtcggcgacgaggtctcgctactccgccgtggcaccaggtatggattcttggtggagaaattcgtctcctgcgaacggcccaaattggcggcggcggagccctgcggggaggttcttgtgctgcgggccgagtcgctccggaagcggctgagggcgatctcggagagtcatgatcctctctctttcttgagggattcacattgtgtggagaacggcagcgatgatgttagggtgaaaaaggcgagagaagaagatgttttcttgcccctgaacctgaatgctccaattgaccctgttgccgtggagggtttactgcgagaagactgtaatcttggccaggggaaattggagcactgcactgattcagcaattgcaaaaaatgaaactgatgaattgattcaacggagcaaggggtcctgcgatggcaatacagagcagaaggaatacagcaatgagaacacagagcagcagcacaatgagaatgagggttgctattcagatgggagcacattcttcctgaatcgcctcattggtattgggtctgatatgagggtggagcaacggagtggagtgacacttccacagcttctgcatcccatggatagcttggagcgagtatttatcgcaacattcacctccgatgtttcctggtttctggattactgtaaggttccacagaacctgccggtgacgatagcatgccacaacaaggagaggtgctggagtgcgagtcgcgaaagtagaaccgctgcccctttcggaagttatcctaacctactattagtttacccccaattcccagaggagatagcatttggaaaggataggaagaagcaaggagtggcatgccaccatccaaagctcttagtgctacagaggaaagacagcatgcgtgtcattgtcacttcagctaacttagtacctaggcagtggcatctcataacaaacacggtgtggtggcaagatttcccttgtaggacatccacagattattcagctctttttagtaaagttgaggaatcaaaatcagatttcgctactcaattagtttcattcatagcattccttatcaatgaagttcctagccaatcatattggataaatgagatagccaagtataattttgaaggagctgctggatacctcattgcttccgttccagggatatatgcacgcaatcctcactatctggagtccaattattgcctttcaagaaaacagatattacacaccaaatcggcacataggatgtttcttggttctgtccaaacatccgtagttggtctgtcccatcggtttcatataccatctgatgctggttctaaactgaaagccctgtctgtacttcttagtaaatgccatgtgaacatgcatggaactacagaagtgatcttgaagaggaatacaaatatacctgcagatgctaatgctgtgagtgtcctagttgctgatctggataaatttaccgaggaagattcagtccatcttggtttcctgcctagagaggttgcaaagtgggtatctcccctcagtgacttggggttcttcacattttctggatttatctaccccagagaagccctggaagctgcatatggagcaactaacacaaaagtgcagttgcttctctatgtatcaaagggtccagagttttctcaaatttcaagactgatccaggatgaacattttcctcttctgtgctcattagtagcatccttaaagcggtcccttggactttggcgattagaagaggtgttgtcacatttcaaatggcctgaaacacttgagactgattttttctacagtgcttcatccattgggacttcaattaatccacaattcattgcaagctttgcttcagcagctggtaaacgatgtaatcaggatttggactccgaagagtctgatccagagtggggttgctggacagcaaaccatgagctaaagaagccatctatcaatttgttgtttccaacaattgacagagtgaaaaatggggcttgtggaattcagttatccaggcatttgctttctcttcctgagagaacatggcaaagactgagatctactggcatatttcgtgacgcaatcccacatccatacgagaggatagggcatcctatgcatgtcaaggttgcccagagacgcttcgagtctcgtctaggcagacactcattcggctggacttactgtgggtctcacaatttcagtccagcagcctggggacaacaacttcctccaccaaaagcaaatcctactgaagccagagccgtttcttctggtccgaggctacacatttgcaactatgagctcggcatcatcctcattattccaccatctgccatgtcaaagcagatcagtggaaggaggcacgagatcaatgacattgtcctgccattcgtcgtccctccaccgcaatataagctgggcgataggcctgcgacatcgttagccatgcgagaggccatggctgaagctagaattctgcagagtaacgatttagtactggacttgtcacaggatacagacgaggatatacctgatgaagatgatgagcatgtgattgagctgtctgattgctcccctgaagagaaggaagaggagaagatctacgcagagacgctgtgggagcaagtagactcttcacaaagaccaggctggccagtgaagttgaagtccagatgtttcggatga</cdnaseq>|
| |
| − | AA = <aaseq>MEAEPPPENRHDDHHPSTSGGGLGYFHLRLLCPAAPLLLLLRSD RLYSLSLSRRRGPRLRLLASPRRRHGRRRRALLLSTSGCALRLTHRSSSADAVRVNGR PLLRGGCPADLAVGDEVSLLRRGTRYGFLVEKFVSCERPKLAAAEPCGEVLVLRAESL RKRLRAISESHDPLSFLRDSHCVENGSDDVRVKKAREEDVFLPLNLNAPIDPVAVEGL LREDCNLGQGKLEHCTDSAIAKNETDELIQRSKGSCDGNTEQKEYSNENTEQQHNENE GCYSDGSTFFLNRLIGIGSDMRVEQRSGVTLPQLLHPMDSLERVFIATFTSDVSWFLD YCKVPQNLPVTIACHNKERCWSASRESRTAAPFGSYPNLLLVYPQFPEEIAFGKDRKK QGVACHHPKLLVLQRKDSMRVIVTSANLVPRQWHLITNTVWWQDFPCRTSTDYSALFS KVEESKSDFATQLVSFIAFLINEVPSQSYWINEIAKYNFEGAAGYLIASVPGIYARNP HYLESNYCLSRKQILHTKSAHRMFLGSVQTSVVGLSHRFHIPSDAGSKLKALSVLLSK CHVNMHGTTEVILKRNTNIPADANAVSVLVADLDKFTEEDSVHLGFLPREVAKWVSPL SDLGFFTFSGFIYPREALEAAYGATNTKVQLLLYVSKGPEFSQISRLIQDEHFPLLCS LVASLKRSLGLWRLEEVLSHFKWPETLETDFFYSASSIGTSINPQFIASFASAAGKRC NQDLDSEESDPEWGCWTANHELKKPSINLLFPTIDRVKNGACGIQLSRHLLSLPERTW QRLRSTGIFRDAIPHPYERIGHPMHVKVAQRRFESRLGRHSFGWTYCGSHNFSPAAWG QQLPPPKANPTEARAVSSGPRLHICNYELGIILIIPPSAMSKQISGRRHEINDIVLPF VVPPPQYKLGDRPATSLAMREAMAEARILQSNDLVLDLSQDTDEDIPDEDDEHVIELS DCSPEEKEEEKIYAETLWEQVDSSQRPGWPVKLKSRCFG</aaseq>|
| |
| − | DNA = <dnaseqindica>27..1018#1118..1252#1365..1509#1666..1947#2180..2441#2589..2755#2846..2956#3872..3923#4006..4115#4225..4353#4652..4741#4831..5391#gtcatctcctcctcccctcccttcccatggaggcggagccgccgccggagaaccgccacgacgaccaccacccctccacttccggcggaggcctgggctacttccacctccgcctcctctgccccgccgcgccactcctcctcctcctccgctccgaccgcctctactccctctccctctcccgccgccgcggcccccgcctccgcctcctcgcctcccctcgccgccgccacggccggcgacggcgggccctcctcctcagcacatcgggctgcgccctccgcctcacccaccgctcctccagcgccgacgccgtgcgcgtcaacggccggcccctcctccgcggtgggtgcccggccgatctggccgtcggcgacgaggtctcgctactccgccgtggcaccaggtatggattcttggtggagaaattcgtctcctgcgaacggcccaaattggcggcggcggagccctgcggggaggttcttgtgctgcgggccgagtcgctccggaagcggctgagggcgatctcggagagtcatgatcctctctctttcttgagggattcacattgtgtggagaacggcagcgatgatgttagggtgaaaaaggcgagagaagaagatgttttcttgcccctgaacctgaatgctccaattgaccctgttgccgtggagggtttactgcgagaagactgtaatcttggccaggggaaattggagcactgcactgattcagcaattgcaaaaaatgaaactgatgaattgattcaacggagcaaggggtcctgcgatggcaatacagagcagaaggaatacagcaatgagaacacagagcagcagcacaatgagaatgagggttgctattcagatgggagcacattcttcctgaatcgcctcattggtattgggtctgatatgagggtggagcaacggagtggagtgacacttccacagcttctgcatcccatggatagcttggagcgagtatttatcgcaacattcacctccgatgtttcctggtgcgtcttctctctgcttgtatatcttcctttgcttgcaacattgagagatatatgattgaattattgatgggaatacaaatttgtgtatggcctaaggtttctggattactgtaaggttccacagaacctgccggtgacgatagcatgccacaacaaggagaggtgctggagtgcgagtcgcgaaagtagaaccgctgcccctttcggaagttatcctaacctactattagtgtaagtagcaaccttgtgttttgttcagtagttgtctgtatatatatctcatgcttctgcgaaacatgcatgataatgaaacactgatgctaatgttaattttcccctcaagttacccccaattcccagaggagatagcatttggaaaggataggaagaagcaaggagtggcatgccaccatccaaagctcttagtgctacagaggaaagacagcatgcgtgtcattgtcacttcagctaacttagtacctaggcaggtcggtatctttctgtactccatgaatgtgcttgttactagaattcagttcgcacctaggcaggttctgcatttctgatgcactctttaattgtttgttctgtttgtggtgatttctgctgttattctcggtgaaagtaaattatgctttgtgcagtggcatctcataacaaacacggtgtggtggcaagatttcccttgtaggacatccacagattattcagctctttttagtaaagttgaggaatcaaaatcagatttcgctactcaattagtttcattcatagcattccttatcaatgaagttcctagccaatcatattggataaatgagatagccaagtataattttgaaggagctgctggatacctcattgcttccgttccagggatatatgcacgcaatcctcactatctggagtccaattattgcctttcagtaagtcttatttcagatagcatttgttgttccctccttttactgaagccatttcactaagcatcttaacatactaagttactaactataatttgcaaagattatcaggcaaatatactatggctaagtggattatattcctaatctaaactagacactactgctgttctttcttgaaatagttctaatccagccctattatcttactagccactatccattatttatgcagagaaaacagatattacacaccaaatcggcacataggatgtttcttggttctgtccaaacatccgtagttggtctgtcccatcggtttcatataccatctgatgctggttctaaactgaaagccctgtctgtacttcttagtaaatgccatgtgaacatgcatggaactacagaagtgatcttgaagaggaatacaaatatacctgcagatgctaatgctgtgagtgtcctagttgctgatctggataaatttaccgaggaaggtatgtactatgtacacctcaaggtttacatcttttgctaaacaaactcacctccaaaaatattgtgttgcatggttcatgtggcaaacaaatacttgggattttctgttatggtagcaaataaccatgtccaatgccctgaaatagattcagtccatcttggtttcctgcctagagaggttgcaaagtgggtatctcccctcagtgacttggggttcttcacattttctggatttatctaccccagagaagccctggaagctgcatatggagcaactaacacaaaagtgcagttgcttctctatgtatcaaaggtatgtaaaagattcttacggatgccttttcataagtcaagagtactactgtgaaattgtccatgcatatcttacagtcataaaattcagggtccagagttttctcaaatttcaagactgatccaggatgaacattttcctcttctgtgctcattagtagcatccttaaagcggtcccttggactttggcgattagaagaggtttgcaattttatatgggcaatatatgaccttgatttgataaattatgctatgcgtaaactgaattacagttctttgagatgattattctaccatattatttgtttttttttttgactaaatcaccggggggggagagattccccacctgaatttgtcattgcattaagaggaaataagttcattacaataaattgagagattgtaagggggaggagaaaatttgtttccaaacagatattacataacgatcttcatcctttaagttctccgcccaaagagctgcctcgcttatgcaacgttgcaggcaggatcagatggaggggcttttctcgctgaaaacgacgtcatgtcggtggttccaaatagcccacatgcaaagcaggaagaaaacctggcagtgaagcgccggcactcttgaacttgggcccaaacgatggaagtgcctaacgtcttgaacttgcggttgaacgttaatcatcgcccagaaagcttgagcgaacggacatgaaaagcacatatgattagctgtttcttcctcctgattgcagatgtcacattttccgtcctgaacaatggttttcttcagcaaatttccctttgtggacagacgattgcggactagtaaccatgcgaaaagtttaactttgagaggagctctgcaattccaaattagttcccaattaggcgaatgcaaaccagggggcagtcgtgcctcatagaatttttttgttgttaacctccctagctttgtactgagcctgaaaaaaaaagaccactagcagtagtttgaaggtgattgggataatccaaattcatactaattgctagctctattgtgagataatccataccgcctgttctatttacttgcattaatcgagtgtcaactgtattttccattggttcaaacaggtgttgtcacatttcaaatggcctgaaacacttgagactgattttttctacagtgagtaaaacatttttttttcttagctggaatcaattgtcatattcagggattccttacttcagatttaaaatatttgtaggtgcttcatccattgggacttcaattaatccacaattcattgcaagctttgcttcagcagctggtaaacgatgtaatcaggatttggactccgaagagtctgatccagaggtaaattttaactgtttattgaagcatcccctattctaataaacccctgcccttttttgaccaattcttcacgcacataacttttaccaattttcattggttgtcctagtggggttgctggacagcaaaccatgagctaaagaagccatctatcaatttgttgtttccaacaattgacagagtgaaaaatggggcttgtggaattcagttatccaggcatttgctttctcttcctgaggtagatttctcttcttgtaacttactatttgcatattttaccaataagagagatcatattgtatgtgcgttatacttgatgtgcttgtaaggttgtagccaagtcttcttttccattttgtgcctaaagctgcatactatccttgtgtgctttagttcagtgaattaagatgttatgcatatcgggataagcaactatattgatctgtttagagaagcgacgttaagcatattgctaattcaggggatacattcacagctgctgtgttgcagtgggagtaactctttccttttggcagagaacatggcaaagactgagatctactggcatatttcgtgacgcaatcccacatccatacgagaggatagggcatcctatgcatgtcaaggtacgatgttatacatatcttgggggaatatcatggtttatactttgcaacattgtttagtgacatgttaaatcatgagttcatgacaggttgcccagagacgcttcgagtctcgtctaggcagacactcattcggctggacttactgtgggtctcacaatttcagtccagcagcctggggacaacaacttcctccaccaaaagcaaatcctactgaagccagagccgtttcttctggtccgaggctacacatttgcaactatgagctcggcatcatcctcattattccaccatctgccatgtcaaagcagatcagtggaaggaggcacgagatcaatgacattgtcctgccattcgtcgtccctccaccgcaatataagctgggcgataggcctgcgacatcgttagccatgcgagaggccatggctgaagctagaattctgcagagtaacgatttagtactggacttgtcacaggatacagacgaggatatacctgatgaagatgatgagcatgtgattgagctgtctgattgctcccctgaagagaaggaagaggagaagatctacgcagagacgctgtgggagcaagtagactcttcacaaagaccaggctggccagtgaagttgaagtccagatgtttcggatgacaagttcctgtcatcgcatctgatttcaagtgcaggcagccgcacgagatctgacgattctttcttactgaagatatttgattcgattgtgatttgttagaattgtattttacaatgtgtagtatgcattcgttgtcaatctttcttgtaagtatctcaatacatctatacttgaacttcacagcgtatatagttgaagtttatttcaaaaacttttattgagctc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001059233.1 RefSeq:Os04g0403400]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
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Annotated Information
Function
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Expression
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Structured Information
