|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0440100|
| |
| − | Description = Nonsense-mediated decay UPF3 domain containing protein|
| |
| − | Version = NM_001059408.1 GI:115458545 GeneID:4335928|
| |
| − | Length = 7675 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0440100, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:21919307..21926981|
| |
| − | CDS = 21920236..21920274,21920388..21920506,21920610..21920675,21921287..21921755,21921835..21921932<br>,21922724..21922808,21923622..21923726,21923815..21923894,21923990..21924088<br>,21924196..21924291,21925442..21925548,21926509..21926669|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:21919307..21926981
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:21919307..21926981
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcggcggcgcgcgcgcacgtgaaggacccggcgcaccggaccaaggtggtgctccggaggctgccgccggcgatcgcgcagcaggccgtcgtggaacaggtcgacgcgcgcttcggcggccggtacgactggtcgtgcttccgccccggcaatgccagccaaaagaatcacagatattctcgactctaccttaacttcaagggcccagaagatgtcgttgaatttgctgaggtcttcaatggtcatgtgtttgtgaatgaaaagggtgctcaatttaaagctcttgtggaatatgcaccatcgcaacaggtccncaagtcaaacacgaagaaagatgctcgtcaaggaactataatgaaagatccggaatacttggagtttcttgaatcgatttcaaagcctgctgagcatctgccaagtgctgaaattcagctcgaaaggaaagaagctgaaagggcagctgctggaaaggaaccacctgttgtgacgcctcttatggtctatgttcgccagcaaagggcagctaagagtatggctcagagatctggaagtagtagactcagtagaaaagttgcgggtgttgttactagcagtcctagtccttctaaaaggggttctgagaagcgcaggacctctgcttcgacgcaatatgttctacgagagaatgctaaggagaagccaacttatatcttagtgccaaagagagacgagcatgcgcagagggaaaaagatgctacaagtggcgggatttctggttctgctcatgtcgcggaaaacaaaaaagagaaaattgtgcttttgaaaggaagagcaagggtcgattctaatacatctgatgtcacatctcagcagcagtcagggacccctatgaaaaatgctgcacaatctagttctaggcaagatccgcggcttgagggcagtggcagaattattaagactatactttcaaacaaggaaggacggcatgtggttacgtctcaacatgatcaggaaggtcacataattacagctgagaagcgcccaccacggattccaaacccacgttccgttgttaaagatcaggtagttgaaaatgctgagaaaaaccatttggatgacaaacatagtcatctccatggttctgggctcatcagtgaaaagactgaaagacatgctagaaatagagataggcctgatcgtggtgtatgggcccctcgtcgctatgacaaatctgcatcaggtgggacgcattcctcgtcatctgagttctcaccaatgcagcaacattctggtgaaaatttctgtcagcaagcagatggccatggagagagaaaaatagacccaaggggtcatggtggtattcgcggaggccctgtggaaaatggacatagacatgctaaccgccgtggtcctccacgtggtctgaaggagatggaaatttctgcaagcacatctgatggaaagccttcaaagagagcctctgccaactatggtgctcatgagaggcaagtgtgggttcaaaaatcaagctcggcgacgtga</cdnaseq>|
| |
| − | AA = <aaseq>MAAARAHVKDPAHRTKVVLRRLPPAIAQQAVVEQVDARFGGRYD WSCFRPGNASQKNHRYSRLYLNFKGPEDVVEFAEVFNGHVFVNEKGAQFKALVEYAPS QQVXKSNTKKDARQGTIMKDPEYLEFLESISKPAEHLPSAEIQLERKEAERAAAGKEP PVVTPLMVYVRQQRAAKSMAQRSGSSRLSRKVAGVVTSSPSPSKRGSEKRRTSASTQY VLRENAKEKPTYILVPKRDEHAQREKDATSGGISGSAHVAENKKEKIVLLKGRARVDS NTSDVTSQQQSGTPMKNAAQSSSRQDPRLEGSGRIIKTILSNKEGRHVVTSQHDQEGH IITAEKRPPRIPNPRSVVKDQVVENAEKNHLDDKHSHLHGSGLISEKTERHARNRDRP DRGVWAPRRYDKSASGGTHSSSSEFSPMQQHSGENFCQQADGHGERKIDPRGHGGIRG GPVENGHRHANRRGPPRGLKEMEISASTSDGKPSKRASANYGAHERQVWVQKSSSAT</aaseq>|
| |
| − | DNA = <dnaseqindica>6708..6746#6476..6594#6307..6372#5227..5695#5050..5147#4174..4258#3256..3360#3088..3167#2894..2992#2691..2786#1434..1540#313..473#acctcgctctctcctctcttcctcttcccccaatctccgacagttgccaaatttcccttcccacccccaaacccaaaccccagcgacgacggcgacgacgcgcagcagacgaaagcgagcgagaggcgagagaaatcccatcgtttcccaaaccctaaccccctcctcctcctcctccagatctcggcggccgcgcggctgatgcgaggtgagccccgtccgccctagggtttgcggcggggtgcgtggtggtggtggttgggccgggggggacggggccctcctgctcgcgggggtgggggttgggtggggatggcggcggcgcgcgcgcacgtgaaggacccggcgcaccggaccaaggtggtgctccggaggctgccgccggcgatcgcgcagcaggccgtcgtggaacaggtcgacgcgcgcttcggcggccggtacgactggtcgtgcttccgccccggcaatgccaggtaacgcgcgattcctctcgccttgctccctccgtgtgcgtcgtgcgggtgcgtgcgtgcgtgcgtgcgtgtggttggggggcgtcgggggcacgtttggtctgtagctagggattgggttcgaagctgtttattagcctgcgaattgtgtacggggaggtaccaccccatgaaatttcgttagtagatttcattggctggttttgattgagtagctgtggccagcaattagcattctataatcgtgcaatttacagatacaagtttggactgtttgcctctatctagtgcatttggttatgtctagcaacaaataggttgctgtgatcaagtagttactgagttttaagtttgcaatcctaactgattgtgggccatttacagttctttcgcgttgttgtgatctcgaagcatagtggattgtgtacttcaaattgtagctaggatattttggaggtgtattttagtttattcttattagatttaatattagctgtgaccaaattattgcttggagatagtgcccaccttcttagttttgttgcataattttagctgtaagtgaactaaatgtgcttttgattgcagctagtataagtgaggtcaatatgttttttttttataaaaaaaattaccttaccttgccattttggctgctggagtaagaggttttgttctgtttgttcatttttatgcttctgtaggattgccttaagacatgctagttatagagaaaatttcctataagaaaacatgcacactgcaaaactacttggcagcattgagccttttttagtttgtgctgagtgatgtgcaacgtactgtggccattcgtatgtagctagtgattcaattgttatgtctgcaattcttaactcattgccgtggaagctaaatgatagtggcattctccacttcatttttattctcatttttctgacaatgttattgcttgtccagccaaaagaatcacagatattctcgactctaccttaacttcaagggcccagaagatgtcgttgaatttgctgaggtcttcaatggtcatgtgtttgtgaatgaaaagggtaactttcacatttatgtaccaacgtttctttttgccatgcaaatttatattcaggattcagaacttatattctgattatgtcaatgttgtcactatcaaaactagatacacatgtagcaatataagcagtgtggatctttgtacaaactaatagtgcaacatagagaatcagaatgaaattgcaattattgagcatttacatagtctttgaattggagattgatcttgtcgaataggattttgggactaaacagtaggttttgcatatttttccctattcaacttattgatgtctagtattatttttccctttttgattagtgcgcagcaaagaaaatattcaactgtaactatataaattccaatattatggaaatagtttaaattgagaaggcccaacattgttgttaccatttttggtgttattagagatatagaggtctcactgtggctgttatagcgtcaattttctaggtacttgattttgctataagtttccttttatatgttgtccaattattccattcctaagcacagagtttcctttatatctaagcttgggggcaactgtggtgtattctggtcttttctcctttactagtacagttgaatatgcattcaagctacctaagtatttgccaacatacttgtctaatgttgtgtaatgctgtgacaataaagtactatgataatactatacttctgttaggttctccaaatatatcacagtagaaattgataacctaacttgcattttggaggctggagaccatcctacaaacaccaccttttgttactatttattggttactgatgtatgttattgctattctttcttatacacttcatagcattttaacattttcagatgcctattttcagcatgctggtataattgacattcatgttaagttattttcttatttttggtattcaagttaaaaaagaggttgacttttgatggttgcaagcaagcactgcttataatgtgatatattttaggtcggaacataagttaatacttttaatgtaatcaaggtgttgagttttccttcaacagtcgagcacatgcttgtaaatttaattttggactatgcttttttgttttaaattttattgtcatgcatgcggcctatggttcctgtcaggtgctcaatttaaagctcttgtggaatatgcaccatcgcaacaggtccncaagtcaaacacgaagaaagatgctcgtcaaggaactataatgaaaggtcctagacaatcatttaatctcattctccatcctgtaggtgacacaatttcatatttatcattacttcaaacttagctggcatcttttttgggatttaatatccagatccggaatacttggagtttcttgaatcgatttcaaagcctgctgagcatctgccaagtgctgaaattcagctcgaaaggaaagaagctgaaagggcaggtaaagtattgtttgtaatatcagattataattatgcctttcaaagatgccaagcataaaagaagggtctattatcaacttgatcactattgcagctgctggaaaggaaccacctgttgtgacgcctcttatggtctatgttcgccagcaaagggcagctaagagtatggctcaggtatacgtgttcattaaactgtagtattggtttatattatattttatcaacttgagggtcggctaactagtacttccacatgttacagagatctggaagtagtagactcagtagaaaagttgcgggtgttgttactagcagtcctagtccttctaaaaggggttctgagaagcgcaggacctctgcttcgacggtaaatttcttgcttgaaaaaaatagtacaattttaaatggccacaagaggtggggcttcattttttcatgcatatattttcatagtctggtcttggatttcatgaaatgaacatatcctatgtcatgttttcttcacgaaatactactattttaaatggtcacaagaggcgggacccatctattttatttcccgataggttctttttatttcttttaatatttattgccctttctcgccatggtgttcgccctaatttcagtttgtttgtactatcgacctatgtcatgttttctttgttcaaaacaaaatcctgtccccagtgtgcatttctgtttgtgctactgtttgtgtattgtatgctcttatatgttttatactccctctgtttcatcttataagtcgttttgacttttttcctagtcaaactttgttaagtttgaccaagtttatagaaaaatttaacatctaaaatatcaaattagattcattaaatctagcattgaatatattttgataatatgtttgttttgtgttaaaaatatcattatatttttctaaagaagtttgactaaggaaaaagttaaacaacttataatatgaaatgcagggagtatattttatttctgggctattgttgtgagttttcatctattctttttcaacctttgaacagtgcactgtgtctcagtttggttattttgggtttcatgctgcattgttataaaaagtacccagttcattccgcacaaaaactatgccatgaggttatgacaagctactgtttttgtctttttttcatgtgatcttcagcaatatgttctacgagagaatgctaaggagaagccaacttatatcttagtgccaaagagagacgagcatgcgcagagggaaaaaggtactgctggaacttcaggtggtactgattcaagaaatagataatcactataactttgttgtaaccattcatatcaacatgtccttttattttattgattattactaagtatctgttctctgctataacatatccatgcctatatatgctgataaaaggttgtatcaactaatgtatagtttgagctgagttaggtaatagggtgatgacactgattgattcaattctgtgagaactgaggcaagatcaagttgatcttattatgctgtgttgcatggtgaaatctagctatatgaaacctgtacaatttaagtaaataggttaaatcttagttgtttttatgactattccaaaacaaaaactaaaaccactgcaatgctaaaagcaccatcaacatagacaagtttagtttgggcttgtttacttatttggcataatagctattgtgttgagataggcctgtggacatttgtatggctacctgccatccaattatggcaatggcgtaccttgttgggtgacatctacttttgctacactacgtcaatgtcctatcctatagaaaatggatttcattttgaacttccatcattttgtctttgcatggagttctattagtcagttacctttccaagaagtgtatagtattattcttgtcgtcttctgttagcctctatccttccaatttgtaaattgttgatgtatgctatttttgcactttctgcccatatgtcttgatgaaagttcctttttagttgttaatattgctgtttcgttcaattgtctcgtagatgctacaagtggcgggatttctggttctgctcatgtcgcggaaaacaaaaaagagaaaattgtgcttttgaaaggaagagcaagggtcgattctaatgtaagtatataagctccacgaatagtttgaccattttgttggtaactgtactgactgtcatttgatatgttttttccagacatctgatgtcacatctcagcagcagtcagggacccctatgaaaaatgctgcacaatctagttctaggcaagatccgcggcttgagggcagtggcagaattattaagactatactttcaaacaaggaaggacggcatgtggttacgtctcaacatgatcaggaaggtcacataattacagctgagaagcgcccaccacggattccaaacccacgttccgttgttaaagatcaggtagttgaaaatgctgagaaaaaccatttggatgacaaacatagtcatctccatggttctgggctcatcagtgaaaagactgaaagacatgctagaaatagagataggcctgatcgtggtgtatgggcccctcgtcgctatgacaaatctgcatcaggtgggacgcattcctcgtcatctgagttctcaccaatgcagcaacattctggtgaaaatttctgtcagcaagcagatggtaagattccttttgaagcgattttagtactgttcatttgagttcttgagttattgtattattgagggtgaatagccaattcagtccttaaacttttgctcatgggtcaaattagtccttgatgttttacgttgtccaaacaaatccctaaagattatcatgtggcttaaaacgccacatggacatgccacatcattcatgcatgtacagtcaacaattaaatatccattttacccttacattttctatagaaaaaagaaaaaaaaaaggaaaacatgaagaaagcaatcttaaaacaaaagaaaaatgacacattctttagttaccaatgcaacatctttttcttaattctttttatttatttcctatggagaatgtataagggtagaatggacattttaaatgttgaatttgcatgcacatgtgatgtggcatgtacacgtggcatttttatgggtccaaggattatattaaatcacactataaagtttggggacttattttggccaatatgaaatgtcaaggactaaattgatccttaagtgaaagttcaaggatcatgttggttattcaccctattattaattatgtgacttgatgatgcaaagcaggccatggagagagaaaaatagacccaaggggtcatggtggtattcgcggaggccctgtggaaaatggtttgtatatttagttgttgcaattatgaccatgaaaaatgatgcaaactgttctccagatcattttctgtactatggttaatactgtcaatcttcaattcaggacatagacatgctaaccgccgtggtcctccacgtggtctgaaggagatggaaatttctgcaagcacatctgatggaaagccttcaaagagagcctctgccaactatggtgctcatgaggtgtgatcagaatatagttttttattctgcctttgacatttcaagggcctatgttttgcgtgaaatgatttttattcactagatttcttataatatatgaatgttatatgtagaggcaagtgtgggttcaaaaatcaagctcggcgacgtgatcttgtccaatgatggtaaactatttgtggtccagaaattttgttttggtctttggttatcaaaacacatgcaccacaagaaaaagaattactagaagtgtgtcaccaaatacacgctaatttatttgctcttttgcagatactcatcaaaacaaatattgcaagttgtggagttctggattttgcagcttgatcctgtgaagtactgttaacaaaatgcccccgatcatatgcttccatgaagtgcaatctcagatttgtcaatcgaaatctcagctttagctgaaaagggagcttatatgatttgattcacagcaatagtgaattaacataacccactttaggtagctcttgattgctttgggtgagacttgatttgggcccaaggttgctattctggagcaatggaaggatttaggttggcatcattaccctcgtgacagtggtcacatatttctgagacccctggagaatatacacgacctcaactaatcagagatgggtgtacatatctctagagaaagaagaggtctggttctgacttctgttcgcaggttagcggtgccatgtatctacaaaagagataaaaaaaagttatcagactgcctggtttgctaaataaaagtgaattagttgatagattatgagaatccactgtttaggcggctgcgaccgtggtcaccaacagaagttaccctagagtgcaaagtggcatctcattttggttttgtgcccctgccccccctgagtaacgggatgtggtattgttttgacatgtggatgttgatggtgtgcgtcttcctgttaatgtttcaccagataattatgggggtattgttaagaatgatgatatgatgtacagcatcaaaggtgcttgctgttttaatcttgagcaagttgtcgtgcttctatgaaatgtgattgttaac</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001059408.1 RefSeq:Os04g0440100]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
