Difference between revisions of "Os04g0566100"

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(Created page with "{{JaponicaGene| GeneName = Os04g0566100| Description = Similar to Transcriptional activator SRCAP| Version = NM_001187120.1 GI:297723370 GeneID:9270561| Length = 8102 bp| ...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os04g0566100|
 
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Description = Similar to Transcriptional activator SRCAP|
 
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Version = NM_001187120.1 GI:297723370 GeneID:9270561|
 
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Length = 8102 bp|
 
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Definition = Oryza sativa Japonica Group Os04g0566100, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
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Please input expression information here.
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AP = Chromosome 4:28778168..28786269|
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CDS = 28778168..28779052,28779090..28779243,28779941..28779981,28780287..28780537,28780638..28780818<br>,28781365..28781550,28781623..28781796,28782219..28782377,28782651..28782728<br>,28782839..28782975,28783207..28783271,28783342..28783375,28783443..28783599<br>,28784362..28784423,28785268..28785345,28786167..28786269|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008397:28778168..28786269
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source=RiceChromosome04
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008397:28778168..28786269
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source=RiceChromosome04
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgcggcgaggctacgaggagatcgacgacgacgagtggtcgaaccacagcttcaagccttcgcgcgtcctcaagcgaccaagccgaggcgcccagccggactcgcagcctcccccgcccatcgactccttccgttacaaccccaggccttcctcctcctccgccgccgccgccgccaccgccaccgtcgtcctctccgacgacgacgacgatttcgaacttggtgaggaggagcggttgcgccgcgccgggaagagcacccgcgtgctcaatcgtccgcagcggcagcacagcccccctgggcgggcccttccgccccgcgagtccttccgctacaaccctaaacccgccaaggccgccgccgcggtgtcggtttccgatgacgacgacgacggctttgatctcgaagacgatgatttcgacatcccttcttcgaggacctcgcgtccgcgccgtaccgctggtcggcgcttggcaaccgccgtcgccgacctctcggaggaagacgacgatttagagctcgctgatgatgattttgaccatccagacccaaggccaacgaggccgcgtcgagccaccgctcgccgtttcgtgattaaggacgatgatgacagcgacggggatgtgggtgcgtctgaggtggatggggtagaagcagaggaggatgatggtgtgaactggtcggagttggagaatgaggacgatgaagatggggactatggtgagacgaaggtggaggtggaggagggggatgtagtgggtaaggcattgcgcaagtgcgcgcgcatttcggctgatttgcgacaggagctgtatggctcatcgacaaggaattgtgagagttatgctgagatagatgattccagtgtccgaattgttacccaggtgtggagttttgattcaatggatgtgtcggagcaggatgatgtggatgctgcatgcacaagcgaggagtcggagtttgagcctattctgaagccctaccagcttgtgggggtcaattttcttcttctcttgcaccggaaaaatatcggtggagcaattttggctgatgaaatgggtcttggtaagacagttcaggccgtgacctatcttactctgttgcggcatctatataatgacccaggtccacatctaatagtttgcccagcttctgtgttggaaaattgggaaagggaacttaaaaaatggtgtccttcattttcaatcatcatgtttcatggtgctggaaggactgcctactcaaaggagttgagttcattgggcaaagctggttatccgcctccatttaatgtcctccttgtttgttactctctctttgagcggcggagtgctcagcaaaaggatgatcgcaaagcactcaaaagatggcgatggagttgtgtgttgatggatgaagcacatgtactgaaagataagggtagcttccgatggagaaaccttatggctgtcgcacaacatgcccgccaacggctaatgctgacaggaactcccctccaaaatgatttgcatgagctatggtcattgttggagtttatgatgcctgatatatttgccactggagatattgatctgaagaagctgttaaatgcagaagatcatgagctaatttcacgtataaagtccattttggggccatttattcttagacgtttgaaatcagatgttatgcagcaacttgttccaaagatacaacatgttaatttcgtaacaatggactcagagcagtttcaagcttataactatgccattgatgaataccgtggtgcttgtcaagctcgtagcgcaaaatccacatccaatttttctaataatgttgttgggttgattccaaaacgacaaatatcaaactatttcatgcagttccgtaagattgcgaaccatccattgcttataaggcgcatttacagtgacaaagatgttgatcgaattgcaaagttactgtaccctaaaggtgcattcggttttgaatgttcattggaaagagcaacccaagaacttaggaagtacaatgattttgctatccaccaactattagtttcctatggtgattctggtacaaagggtgcccttacagatgagcatgttcttggatcagcaaagtgtcaggccttagctgagcttttaccttccttagcaaatgatggccacagagttctcatattcagccaatggacgacaatgcttgatatccttgaatggacactggaagtaataggagttacttatagacgtcttgatgggggatggatcggcaagctgaagatcgctgccatcgcattggacaacagaaacctgtcactatctatagattgtgagcatatcaccatattcatatcgacgtggctagtgacaaagggttcggttgatgaaaacatatatgagatagcaaggagaaagttagtattagatgctgcaattctccagtccggagcagagttagaagatagcactgatgtacctgagaaaacaatgggagaaattttggcatctcttctcctgttgcttgatgatacgcttgtgacatgtgaggttctgattggatttccgtctaaggcaagatggaacattccaattgtaatgcttgaagatttcgcacatgatcagcaaaatttaatagcttgcttggaagacagattcgttgtggtttatgggctcagtgctgggccatttgttgctcttcttgcttctgtccgccttcgtcctgatggatgttcctctagctgctccggcctgtttggctag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MRRGYEEIDDDEWSNHSFKPSRVLKRPSRGAQPDSQPPPPIDSF                    RYNPRPSSSSAAAAATATVVLSDDDDDFELGEEERLRRAGKSTRVLNRPQRQHSPPGR                    ALPPRESFRYNPKPAKAAAAVSVSDDDDDGFDLEDDDFDIPSSRTSRPRRTAGRRLAT                    AVADLSEEDDDLELADDDFDHPDPRPTRPRRATARRFVIKDDDDSDGDVGASEVDGVE                    AEEDDGVNWSELENEDDEDGDYGETKVEVEEGDVVGKALRKCARISADLRQELYGSST                    RNCESYAEIDDSSVRIVTQVWSFDSMDVSEQDDVDAACTSEESEFEPILKPYQLVGVN                    FLLLLHRKNIGGAILADEMGLGKTVQAVTYLTLLRHLYNDPGPHLIVCPASVLENWER                    ELKKWCPSFSIIMFHGAGRTAYSKELSSLGKAGYPPPFNVLLVCYSLFERRSAQQKDD                    RKALKRWRWSCVLMDEAHVLKDKGSFRWRNLMAVAQHARQRLMLTGTPLQNDLHELWS                    LLEFMMPDIFATGDIDLKKLLNAEDHELISRIKSILGPFILRRLKSDVMQQLVPKIQH                    VNFVTMDSEQFQAYNYAIDEYRGACQARSAKSTSNFSNNVVGLIPKRQISNYFMQFRK                    IANHPLLIRRIYSDKDVDRIAKLLYPKGAFGFECSLERATQELRKYNDFAIHQLLVSY                    GDSGTKGALTDEHVLGSAKCQALAELLPSLANDGHRVLIFSQWTTMLDILEWTLEVIG                    VTYRRLDGGWIGKLKIAAIALDNRNLSLSIDCEHITIFISTWLVTKGSVDENIYEIAR                    RKLVLDAAILQSGAELEDSTDVPEKTMGEILASLLLLLDDTLVTCEVLIGFPSKARWN                    IPIVMLEDFAHDQQNLIACLEDRFVVVYGLSAGPFVALLASVRLRPDGCSSSCSGLFG                    </aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
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DNA = <dnaseqindica>1..885#923..1076#1774..1814#2120..2370#2471..2651#3198..3383#3456..3629#4052..4210#4484..4561#4672..4808#5040..5104#5175..5208#5276..5432#6195..6256#7101..7178#8000..8102#atgcggcgaggctacgaggagatcgacgacgacgagtggtcgaaccacagcttcaagccttcgcgcgtcctcaagcgaccaagccgaggcgcccagccggactcgcagcctcccccgcccatcgactccttccgttacaaccccaggccttcctcctcctccgccgccgccgccgccaccgccaccgtcgtcctctccgacgacgacgacgatttcgaacttggtgaggaggagcggttgcgccgcgccgggaagagcacccgcgtgctcaatcgtccgcagcggcagcacagcccccctgggcgggcccttccgccccgcgagtccttccgctacaaccctaaacccgccaaggccgccgccgcggtgtcggtttccgatgacgacgacgacggctttgatctcgaagacgatgatttcgacatcccttcttcgaggacctcgcgtccgcgccgtaccgctggtcggcgcttggcaaccgccgtcgccgacctctcggaggaagacgacgatttagagctcgctgatgatgattttgaccatccagacccaaggccaacgaggccgcgtcgagccaccgctcgccgtttcgtgattaaggacgatgatgacagcgacggggatgtgggtgcgtctgaggtggatggggtagaagcagaggaggatgatggtgtgaactggtcggagttggagaatgaggacgatgaagatggggactatggtgagacgaaggtggaggtggaggagggggatgtagtgggtaaggcattgcgcaagtgcgcgcgcatttcggctgatttgcgacaggagctgtatggctcatcgacaaggaattgtgagagttatgctgagatagatgattccagtgtccgaattgttacccaggtatgtacttatctgtttttatgcagtctacttgaaggtgtggagttttgattcaatggatgtgtcggagcaggatgatgtggatgctgcatgcacaagcgaggagtcggagtttgagcctattctgaagccctaccagcttgtgggggtcaattttcttcttctcttgcaccggaaaaatatcggtggaggtgttttttaaactgttgcatttgatcatttatgttgccttagatgatattgtcagtaaagatgcatatgactgagatttttttaagtgcacccacgatgaaataaaattgatctatgcagttcagtaattcacttcactccaccctttagcatgatagcatgaaatttacttgcaagcgtcctgttatttctgccatttttgtcttcggaaacatgctgctatttgttattcctttatactgtttagatttccgttatgtgaaattgcaatcaatcttcaatcaatgaaaatgaactcgatggagaacacatttctagacacctttgattttcttgtaattttatgacaagcagacccaaataatggtagggtatctctgaatatggaacaatgaaaattggtaggtcaacagaaaaaaaaacagcattcctgtattcatgtgattaactaccaggagatccatagtatacaggagccagatccacatgtatttcccatgaaaagcttattctataatgtaccaagggattaaagttgaatgttaaatattttttttctgcaaaatcattgttttgttgtttaagtaatattgagttaataaccatgctagttgctttttcttattatgttttattgtttctgcacgccaaagaatctaaactggtcatattaacctatatgttattttcgtgcagcaattttggctgatgaaatgggtcttggtaagacagttcaggtaagatatcttgcagtatgtggtggaaagggaactaataaataaataaataagtatagtgaaatgacatcttatcaggatgtataagctaggctagttcaaatggggagttatcttttttattatggggacctatgcactattttttaatcaaaatagatttttctgaatttcttttggttcaatataaaatattgtcagaatttaacctcatatggcttattttagatgaactgagttgtttgatcctatacttcagtggcaactcatctattgctgtttgatctttgctcttgtgatgacaggccgtgacctatcttactctgttgcggcatctatataatgacccaggtccacatctaatagtttgcccagcttctgtgttggaaaattgggaaagggaacttaaaaaatggtgtccttcattttcaatcatcatgtttcatggtgctggaaggactgcctactcaaaggagttgagttcattgggcaaagctggttatccgcctccatttaatgtcctccttgtttgttactctctctttgagcggcggaggtttgtggttatttattttgtgtttagcaccaaagttttcagagagccgatgatagttcatgtttgtataagtttaagttcctttttatctgtaatgtagtgctcagcaaaaggatgatcgcaaagcactcaaaagatggcgatggagttgtgtgttgatggatgaagcacatgtactgaaagataagggtagcttccgatggagaaaccttatggctgtcgcacaacatgcccgccaacggctaatgctgacaggaactcccctccaaaatgatttgcatgtaagttttgatgataacttgatgggtggttggtttaagttagtcctgctgcatgtgtcgttctgtggttctttgcaatacttatataccatccacctatttgaaaatttaagacatactactgtctgtaaaaatcaggagtatgttggttaggtttcgcacatgaataatcctgcataaccagagtccacatgttagcaaagggctgaagcacataatcagcatgtcaaccaaagatctataactaacacttgtttttggtagaacgaccacttaagcttctggctttaccaagaccttgtatgccttagccttattacttgaaaccgatattgagttcttttggatatggtgattgcatgtcaggttctcaatgctgtttgctgttcatcagtttttaattactacttacatggaaagccatgaaataaatagcaacagttttcggatagctttctgtctccagttctttggagtatgcgcttcaactacttaagttcagttcatttcatcttaaagtaccacttgttttcaactgatttacaggagctatggtcattgttggagtttatgatgcctgatatatttgccactggagatattgatctgaagaagctgttaaatgcagaagatcatgagctaatttcacgtataaagtccattttggggccatttattcttagacgtttgaaatcagatgttatgcagcaacttgttccaaagatacaacatgtacgtcgacctaaccatcaacatatggttttcgttgtcatggttcaactttacagtgatcttgtgtcacaggttaatttcgtaacaatggactcagagcagtttcaagcttataactatgccattgatgaataccgtggtgcttgtcaagctcgtagcgcaaaatccacatccaatttttctaataatgttgttgggttgattccaaaacgacaaatatcaaactatttcatgcagttccgtaaggtcagcagcatatcacacatgtaaatgaattgcactctgggccacattttattgccaaagtttcacttttgaccaccctttgactgatattttcaccttggaccaggtaacttcacatttgttgcactttggaccaccccaaaccactttcttgagcacatcgactctagcacaacaatgaactgcgcaagccatattttttccagaggagtggttagactagctagagaagaaagttggggtggtccaaagtgcaagaagtgtaaagttacctagtccaaagtgataatatcagtcaaaggctggtccaaagtgaaactttggcaacaaaatgtggcccaaagcgcaattcactcttttaaattcaggaaaatgtttattatacctgttctcaaaagttgttcttttctattgctccacagattgcgaaccatccattgcttataaggcgcatttacagtgacaaagatgttgatcgaattgcaaagttactgtaccctaaaggtgcattcggttttgaatgttcattggaaagagcaacccaagaacttaggaagtacaatgattttgctatccaccaagtattgttcatccctttactgttctacctgatcagttttaatccaccttatattgtttttctgactgaattataccagtgcttgccatctttcagtgttgcattgtttgatcataacttttatcctgcttattgctagtaactttcttttttctttgcaccaaatagtatggatgtgacatgtttcttttttgttgttgacgaacctttcctgtgtccaaaatttagatttttttttcaatcctatctgacaattagtttctcacttcttcagctattagtttcctatggtgattctggtacaaagggtgcccttacagatgagcatgttcttggatcagcaaagtgtcaggtgtggttttcccccattccttaaggattgtatatgtacagtaatatcttcagcagaaattgtctttaggatttaacaattgaattccttcatttctatgttttgttcaggccttagctgagcttttaccttccttagcaaatgatggccacagagttctcatattcagccaatggacgacaatgcttgatatccttgaatggacactggaagtaataggagttacttatagacgtcttgatggggggttagttttttttcagcatttatttttggaattaaaatgtttctcaatcctaagcgatgaagttccttctgtttcagcaccccagtaactgaaaggcagactatagtcgacactttcaataacgaccgatctatatttgcatgtttgctttccacaagagctggaggccagggtctgaatttaataggagctgatacagtgataatacatgacatggatttcaacccccagatggatcggcaagctgaagatcgctgccatcgcattggacaacagaaacctgtcactatctataggtaatatgtgctatgtctaattatgttcatttggatattttatcggttacttatgttttttgtgattcagattgtgagcatatcaccatattcatatcgacgtggtgatgataaattcataaatattgaactctacaacatggtaacagtgatgatttcattttctttcaggctagtgacaaagggttcggttgatgaaaacatatatgagatagcaaggagaaagttagtattagatgctgcaattctccagtccggagcagagttagaagatagcactgatgtacctgagaaaacaatgggagaaattttggcatctcttctcctggtgtgaggttcttgtcatagaatgcttgaaggtacataatttcacctgaggatatgtctgtaactgtcaaccttattcattcttcatttaagcgagacacttttggttggccgttctaatatgcatagctcaatggtgcctattttgcactggattttgatttatcactgtctgcctcatctactggtgattctatgaataagcttctgtcaactgtgcttcagactcatattttgttttgaatgtgattcagcatagtgacatactgtataagcttaacataggtacaaataggtggtagagaactttattgtagaaaatactgaaactagaagattcagaaaaataattatacatctgtactgctgaaatttacaagcttgatattaatgaaatgactttataacttgtaggccacattatgtcggataattgcatcactcgatacctcacttttcattttctgttctctggatgacgtctccactattttgctaacacttccttttctagtgtagttctcatctccttatttctgtaaaaggaaccttagctatatgcactgccatttctgctgcattggttgccatgcaccacacctaatataagattctgctgtgttctgtagtgtagattacaggtgatatttttttatttcctttttgctcctgctagcagtgagatgatttttcactgttttggcaccagtggacgactggccagcttgtagcttcagtatgttatttgataattctttcctagttgcttgatgatacgcttgtgacatgtgaggttctgattggatttccgtctaaggcaagatggtatccattattatatcggctattcatttctgaccttacacctgccacctggattaagttcatttcttcttttcctatgaagaatttttcattgaagatgctccttgcttattaatatcaaatttcttattgaagtgtgttgtcgatgaattggtttaaaccgctactcatattatctgttttctgtcctttcttcccacttaactgaatattatgaatctcttgtagatgtgtagttgctgccaaattcttttctgatatatttcaactgtagtaataacctgtttactagatctcaccagtatttgttcgacatattgtgctgatttgaagaaattatccgtgcacctatctcctttctgtaccttacactaccatgcacattgtacccaagcaggtactagcttgtgtacacctgcgtcgttcgcatccacagatctatggctgtaaatgggtactccacattgccacgtattccttataaccttgtcttggatgtaagaaaatgtttgcaggatcttatggttacacaacttatactactgttagcttcattgctttagtcgtgttctacagtacagccttgatattttgctggccattacaagtgtgcaacatattctgctatgaatgtaccttatctcagttgttagagtcgatagaatacgatatactttggtagctatcctgatgagtttcatgtggtattgttctttgatagcatgcattttatttgctgctccatgtccctcacaatgtaaacgttttggtgtcacggataggcctatgtggagcaggtgttgatcagttttaagattttcatttttttttatttttgctgcaggaacattccaattgtaatgcttgaagatttcgcacatgatcagcaaaatttaatagcttgcttggaagacagattcgtgtgagtgctcttaaccttctcctggccgctcttacaattttgttcgttagagccctaggccttgttaacactgttatgtctggtcaatctttcaagtcttgggggtaatatatgaaaaaagaaaggtgaatggaaatgttgtataacaagagatccattttatagtcgtgcagcatttgttcatgctgtggccctctgttttccgtaagatggatgaatgaatgggaactgaatagccctaccccttggaaatatgctcgtctgtgtcgggttttcactatagaatcactgattcatctgatgtgagtacaagagaatgtgtccatttgaccggactatatgctctacaattagtattagtgaaaaatgcaaatgccagcagcatgtgttttattcatgtaagatgattttactcgctaggtggtctgcatctgcaattccgctattcacctcgtccattattgttttaacatgactcccaacgatactaaagttcagagtagccattctgacagtatactgctcctgattccacacggatgtacggggtactagtgcctggccctactgtatatactacatggtactagctctggcgtgatttgtgatttttgcaaatcaaggaaaaagcctggcgctcccttgctcagcccaggagagtcaggagctactgtatgcttgcgtacgtgatgccaggagagtcaggagctactactgtatgcttgcgtacgtgatggaatgaggaattctccatccccggacgatggaaacgacttctgctggattgatttgatttgtttgtccgtcaatgttgggtaaagtgtggtttatgggctcagtgctgggccatttgttgctcttcttgcttctgtccgccttcgtcctgatggatgttcctctagctgctccggcctgtttggctag</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001187120.1 RefSeq:Os04g0566100]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 4]]
 
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[[Category:Chromosome 4]]
 

Latest revision as of 08:02, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

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References

Please input cited references here.

Structured Information