Difference between revisions of "Os04g0588700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0588700| Description = ABC transporter, transmembrane region domain containing protein| Version = NM_001060231.1 GI:115460191 GeneID:4336810...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os04g0588700|
 
−
Description = ABC transporter, transmembrane region domain containing protein|
 
−
Version = NM_001060231.1 GI:115460191 GeneID:4336810|
 
−
Length = 7181 bp|
 
−
Definition = Oryza sativa Japonica Group Os04g0588700, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
+
Please input expression information here.
−
AP = Chromosome 4:30153450..30160630|
+
 
−
CDS = 30153507..30153582,30154939..30156686,30156973..30157059,30157352..30158017,30158180..30158344<br>,30158441..30158735,30158867..30159081,30159196..30159501,30159783..30159846<br>,30159975..30160214,30160302..30160441|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008397:30153450..30160630
+
 
−
source=RiceChromosome04
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008397:30153450..30160630
+
 
−
source=RiceChromosome04
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>ggacaatctctagtcgaaacagtagctgaagccaacggcttcaacatggtgtacaaagaaactgcaaatcaatcagggatccaattcacctgcggcacacaagaaccatttccagatgcttcaaaagaagaaaatgtgaaaaacaggaggaaatcttcttatggagaggcaactatttcacaacatttcactttctcttggatgaatggtcttcttgctaaaggtgccaataagcctttgaatgaggatgacataccagatgttggtgaggaggaaagtgcccaacacatctccagaatattcagtaatatcattgtgaaagggaattttcctctgacagtttcatcgatttgtaaagcagccttccttctcatttggaagaaggcggcactcaatgcaacctttggagtcctaagtgtagtcgcctcctttgtgggggcatacttaatcaaggacttcgtgggctatctaagtggagataatggatttgaaagaggctactctcttgttcttgtatttgtaggtgcgaaggctattgaaactcttgcttacagacaatggttctttggaagtctacaggtttatttgcgcctaagaacatctctgatatctcaggtataccaaaaggtcctttatttatcaagccagtcaaggcagaaacatacctcaggggagataattaactatgtgagtgttgacatcgagaggattgttaatgttgcatggtatgtgaacatggtcttcatgatgcctatacagattacactagcaacttatattctttggaaaaatcttggtctgggttctttagctggaatagcaacaacagccataataatgctttgcaatattccttttacaagaatccagaaaagattgcacgcaggaattatgaaagcaaaagatgacagaatggacatgacatctgaagttataagaagcatgaagatcttaaaacttcaagcttgggatatccaataccttaggaaattggaatatttgaggaaaggagaacatttgtggttgtgggaatttctaagactaaaagcactactagcatttatgttctggggagcacccgctgtcatatcaatcatgacatttgcttcatgcattctgatgggaatccctctaacagctggaagagtgttgtccacactagcaactgtgaatatactgaaggagcctatctttagtctaccagaattgcttactgcctttgcacaggggaagatctcagctgacagaatagtgtcatatctccaagaagaagaaataagatctgatgcaattgaggaagtagcaatagacgaaaatgaattttctgcagagattgatcagggagcattcagttggaaaactgatgcaaaaatcccaacacttcaagatatacatgtaaagatacacaaagggatgaaagtggcagtatgtggagctgttgggagtggaaaatctagcctgttgtcatgtgtacttggagagatgccaaaagtgcaaggaacggttaaggtctttggaaccaaagcatatgttccacagtcgtcatggatactttctgggactattagagaaaacattctctttgggagcccatttgaaactgataggtatgagcggacaattgaagcatgtgccttggttaaagacatcggagttttctcggatggtgatatgacagatataggagaacggggaacgactatgagtgggggacaaaagcaacggattcaaatagcaagagcagtttacaaggatgctgatgtctacctgtttgatgatcctttcagtgctgtagaccctcaaactgggaggcatctatacaagaaatgcctgatgggggtcctaagggataaaactgtgttatacgtcacgcaccaagttgaatttctagttgatgcagaccttattatggtgatgcaaaatggaaggatagcacaagcagggaaatttcaagaactccaacagaacatggcttttggagttatctttggggctcacttttgtgccgtcgaacaagtttgtaacgcaaaaggcacaagcatatatttgtcaaagcatcatgcagaatcagaaaaggtaccaagcatcaatgagtccgatgcagaaaaggaaatcagcagcaaatggcaaaacacaaatatgataaattgcagacaagaagtatttagagataacactgaagaagggaaattgctgcagggtgaagaaagagagaatggatacattagcaagcaagtgtattggtcatacctcacagctgctcgaggtggtcttttcattcctatgataattgcagcacaatgcttctttcagatatttgaagtgggaagcaactattggatggcatcagcttgccatccacgaactggaagcaaatcaaaaatggaatccacccagttcatggtatatgtatttatatcagttggcagcgccttgtgtatcttgattcgagcagttcttgtagctgtaaccggcctcctcacatcagaaaaattgttcaagagcatgatgcattgcatctttcatgctcctatgtctttctttgactcgacacctacagggcgaatcttaaacagggcttcgattgatcaaagtgtgctagatttggagacagcgtcaacattaagtgagagcacattttcagtgatgcagtttctaggaacaatactaatcatatcatatgtttcctggccagttctcattatttttattccatcaatattgatttgcatcaggtatcagagatattacagtctaacagcaacagaattagctcgcctatcaggaattcaaaaggctccaattcttcatcattttggggaaactttctatggagctgcaataattcgagcatttcgccaagaagaccggttctacagatcaaatctgagtctacttgacaatcattcaagaccatggtttcacttgatggctgcagtagaatggctctctttcagaatgaatttgttatgcaactttgtctttgggttctcgttggttttgcttgtgcgtcttccacaaggttttgttaatccaagcattggtgggctggtagtgatgtatgcatggaatttgaatacacaattatcagaagccacccggaatataagtcgtgcagaagcaaacatgatatcagttgaaagaatattacagtacacaaagcttccaagtgaagccccaaccataaccgagggtagcaagccaccaatggcatggccagagtttggcatgataagcataagcaacttagaggtcagatatgcagaacatctcccttcagtattaaaaaacataacttgtgtgattccagctgagaaaacagtaggtattgttggacgcacaggtagtgggaagtcaaccttagtacaagtactttttcggattgttgagccaagagaagggaccatcaagattgacagcatcgacatctgcaaaattggacttcatgatctgagatcgagaatatgtattctcccacaggatccggtgatgttcgatggtacaatcagaggaaatcttgatcccatgaacgagtacccagatagtaggatatgggaggtagtagacaagtgtcagcttggcaatgtggtgcgctcgactgagaaaaagctggatgaaatagtaattgaaaatggggacaactggagcatgggacagcgacaactattttgtttaggcagaattctcctgaggaagagcaagatactagtccttgatgaggcaactgcttcagttgactctgctacagaccggattattcaagagataattcgtcaagaattcaaagattgcacagtgcttgcaattgcccataggatgaacactgttattgatagtgaccttattcttgttcttggtgaaggtagtattttagaatacgacacccccaccaaactgctccagagagaggactctacattctctaagctaaccaaagagtactcacaacaatcgcagcacttcaagtcttcaacggcaatgcacaggatgggtagctactaa</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>GQSLVETVAEANGFNMVYKETANQSGIQFTCGTQEPFPDASKEE                    NVKNRRKSSYGEATISQHFTFSWMNGLLAKGANKPLNEDDIPDVGEEESAQHISRIFS                    NIIVKGNFPLTVSSICKAAFLLIWKKAALNATFGVLSVVASFVGAYLIKDFVGYLSGD                    NGFERGYSLVLVFVGAKAIETLAYRQWFFGSLQVYLRLRTSLISQVYQKVLYLSSQSR                    QKHTSGEIINYVSVDIERIVNVAWYVNMVFMMPIQITLATYILWKNLGLGSLAGIATT                    AIIMLCNIPFTRIQKRLHAGIMKAKDDRMDMTSEVIRSMKILKLQAWDIQYLRKLEYL                    RKGEHLWLWEFLRLKALLAFMFWGAPAVISIMTFASCILMGIPLTAGRVLSTLATVNI                    LKEPIFSLPELLTAFAQGKISADRIVSYLQEEEIRSDAIEEVAIDENEFSAEIDQGAF                    SWKTDAKIPTLQDIHVKIHKGMKVAVCGAVGSGKSSLLSCVLGEMPKVQGTVKVFGTK                    AYVPQSSWILSGTIRENILFGSPFETDRYERTIEACALVKDIGVFSDGDMTDIGERGT                    TMSGGQKQRIQIARAVYKDADVYLFDDPFSAVDPQTGRHLYKKCLMGVLRDKTVLYVT                    HQVEFLVDADLIMVMQNGRIAQAGKFQELQQNMAFGVIFGAHFCAVEQVCNAKGTSIY                    LSKHHAESEKVPSINESDAEKEISSKWQNTNMINCRQEVFRDNTEEGKLLQGEERENG                    YISKQVYWSYLTAARGGLFIPMIIAAQCFFQIFEVGSNYWMASACHPRTGSKSKMEST                    QFMVYVFISVGSALCILIRAVLVAVTGLLTSEKLFKSMMHCIFHAPMSFFDSTPTGRI                    LNRASIDQSVLDLETASTLSESTFSVMQFLGTILIISYVSWPVLIIFIPSILICIRYQ                    RYYSLTATELARLSGIQKAPILHHFGETFYGAAIIRAFRQEDRFYRSNLSLLDNHSRP                    WFHLMAAVEWLSFRMNLLCNFVFGFSLVLLVRLPQGFVNPSIGGLVVMYAWNLNTQLS                    EATRNISRAEANMISVERILQYTKLPSEAPTITEGSKPPMAWPEFGMISISNLEVRYA                    EHLPSVLKNITCVIPAEKTVGIVGRTGSGKSTLVQVLFRIVEPREGTIKIDSIDICKI                    GLHDLRSRICILPQDPVMFDGTIRGNLDPMNEYPDSRIWEVVDKCQLGNVVRSTEKKL                    DEIVIENGDNWSMGQRQLFCLGRILLRKSKILVLDEATASVDSATDRIIQEIIRQEFK                    DCTVLAIAHRMNTVIDSDLILVLGEGSILEYDTPTKLLQREDSTFSKLTKEYSQQSQH                    FKSSTAMHRMGSY</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
−
DNA = <dnaseqindica>58..133#1490..3237#3524..3610#3903..4568#4731..4895#4992..5286#5418..5632#5747..6052#6334..6397#6526..6765#6853..6992#agtcccccgtgctaagttgtaagctgatttacactaatgttactgttcagcagctaaggacaatctctagtcgaaacagtagctgaagccaacggcttcaacatggtgtacaaagaaactgcaaatcaatcaggtaagattcatgctaatttttgtcatgctcatgtgaatggaatcttgctttatcgtgtgctttctactgaaatagaagtttttcaaataattattcctagtcatttataaatactttggaaggaattcctaccttccggagcagatcacaaccatttcactatgtccccacaaagatacggtagaaccagcaagttgaatagatagtattttttgggacacaatagaatcaataatactgcataagattaacctacacgtaggaattataaaggcgctccttgatggagcatttcaatacaacattatcacaagaagaaaatgatatatagaacacaatacctgggagcagcttgatccgtctgacctgccattttgccaagctacctgagaacaaaggtgcatacatactatcacactttaatgcgaactgaaagtatgtatttgcaatacaggcattaggaatttagataagagtatttgcagaaacctgatgtttatacatacaatctcatagattctcttaactcctaaggtagatgttctaggactccttacacttcgctgcggtgtcccacatatggcgtcctccttgattagattaaaactgtactgtatgtctgcatcagaatcatagaatgttcttacgatgttagtagttctgtataaccagcatcctctgttcagttgaggtaattccccttcaccttccatcaaaatgaccgtaggtgtacaccttgaaaaatcccagatagccagacaggtgaacagtatgttacagaaattaagagcatgaagaaggcaatgggggtctagataggtcatgttttgtggctgtgtgcatttcttgcagaggtcgggagtgggctcaattagaatgtatcatcttgttgtatttgactgagttttaataaagcttccattattgagaaatgggcaacatggaaaaataacatatttcaggcttaaacttgcgatgtgcaacaacagaaaagaagaccacagctttgacgcagtttattaagtttcatataatagaatacttgagttctgaggtttttgggcctggtttcccctcaaaaactgggccaagtctcttcttctttaatgaaaacaggctctccctgtcctcttctaaggcttttcctcaaaaaaagaatacttgagttctttatgactaagcaactaaatagtgtagttcacaagttttacttggcatacgtaccataaaatgaaattaaaggtatggtttttgcaaaatggcacacttgtgtcaattatcatttgaaccagaagaaatatcagatttttttaattctccttttgtacaaatacacgtttgttcattgcaaaacagggatccaattcacctgcggcacacaagaaccatttccagatgcttcaaaagaagaaaatgtgaaaaacaggaggaaatcttcttatggagaggcaactatttcacaacatttcactttctcttggatgaatggtcttcttgctaaaggtgccaataagcctttgaatgaggatgacataccagatgttggtgaggaggaaagtgcccaacacatctccagaatattcagtaatatcattgtgaaagggaattttcctctgacagtttcatcgatttgtaaagcagccttccttctcatttggaagaaggcggcactcaatgcaacctttggagtcctaagtgtagtcgcctcctttgtgggggcatacttaatcaaggacttcgtgggctatctaagtggagataatggatttgaaagaggctactctcttgttcttgtatttgtaggtgcgaaggctattgaaactcttgcttacagacaatggttctttggaagtctacaggtttatttgcgcctaagaacatctctgatatctcaggtataccaaaaggtcctttatttatcaagccagtcaaggcagaaacatacctcaggggagataattaactatgtgagtgttgacatcgagaggattgttaatgttgcatggtatgtgaacatggtcttcatgatgcctatacagattacactagcaacttatattctttggaaaaatcttggtctgggttctttagctggaatagcaacaacagccataataatgctttgcaatattccttttacaagaatccagaaaagattgcacgcaggaattatgaaagcaaaagatgacagaatggacatgacatctgaagttataagaagcatgaagatcttaaaacttcaagcttgggatatccaataccttaggaaattggaatatttgaggaaaggagaacatttgtggttgtgggaatttctaagactaaaagcactactagcatttatgttctggggagcacccgctgtcatatcaatcatgacatttgcttcatgcattctgatgggaatccctctaacagctggaagagtgttgtccacactagcaactgtgaatatactgaaggagcctatctttagtctaccagaattgcttactgcctttgcacaggggaagatctcagctgacagaatagtgtcatatctccaagaagaagaaataagatctgatgcaattgaggaagtagcaatagacgaaaatgaattttctgcagagattgatcagggagcattcagttggaaaactgatgcaaaaatcccaacacttcaagatatacatgtaaagatacacaaagggatgaaagtggcagtatgtggagctgttgggagtggaaaatctagcctgttgtcatgtgtacttggagagatgccaaaagtgcaaggaacggttaaggtctttggaaccaaagcatatgttccacagtcgtcatggatactttctgggactattagagaaaacattctctttgggagcccatttgaaactgataggtatgagcggacaattgaagcatgtgccttggttaaagacatcggagttttctcggatggtgatatgacagatataggagaacggggaacgactatgagtgggggacaaaagcaacggattcaaatagcaagagcagtttacaaggatgctgatgtctacctgtttgatgatcctttcagtgctgtagaccctcaaactgggaggcatctatacaaggtccttttccccttaagagccaacaaaagaaaataacaccagggtcacaaaaatataatgctttgatggtttcaaattttccatagttaaaagaagtcatcatgttctctaggacaaacaatgggcatcgtatatttgagatcttgtgattattcaataatcttgtccatattattattgatatttatttctctcgctaaaataaattgctcatatctatatttttactggcaaggagaagccctgttacataaccattaacattggctctatacattttttgcagaaatgcctgatgggggtcctaagggataaaactgtgttatacgtcacgcaccaagttgaatttctagttgatgcagaccttattatggtaagcccctgaaaaaaaaactaaagacatgattgtactgaacattaggataaataatgatgactgctaaaaacatgctgtgcatatgggaatccttttagagaatttacagccctttgcaggcttgaggtgtagaggtatctcctagtgttagttttgtataactttcagtagctacacctatcagttctcatgatccacactaggagatactactacctctcaataactcataaggatcccagaaaagaaactagtatgtttaacttgactggttgaagcaatattgcaggtgatgcaaaatggaaggatagcacaagcagggaaatttcaagaactccaacagaacatggcttttggagttatctttggggctcacttttgtgccgtcgaacaagtttgtaacgcaaaaggcacaagcatatatttgtcaaagcatcatgcagaatcagaaaaggtaccaagcatcaatgagtccgatgcagaaaaggaaatcagcagcaaatggcaaaacacaaatatgataaattgcagacaagaagtatttagagataacactgaagaagggaaattgctgcagggtgaagaaagagagaatggatacattagcaagcaagtgtattggtcatacctcacagctgctcgaggtggtcttttcattcctatgataattgcagcacaatgcttctttcagatatttgaagtgggaagcaactattggatggcatcagcttgccatccacgaactggaagcaaatcaaaaatggaatccacccagttcatggtatatgtatttatatcagttggcagcgccttgtgtatcttgattcgagcagttcttgtagctgtaaccggcctcctcacatcagaaaaattgttcaagagcatgatgcattgcatctttcatgctcctatgtctttctttgactcgacacctacagggcgaatcttaaacagggtcagtccattctcctgtctcagaagtgtaaactatgtaaaataaatcctaaagaaattctatgtaaaataagtaaacatatactgcattacacaggaaagtgtaatgtgtatgtcgctttacctgagttgctaatacatgatttttgcattgttcatgtaggcttcgattgatcaaagtgtgctagatttggagacagcgtcaacattaagtgagagcacattttcagtgatgcagtttctaggaacaatactaatcatatcatatgtttcctggccagttctcattatttttattccatcaatattgatttgcatcaggtatcaggtaagagttaactgtaacttagtcagattcaaaatagtatcagtacacacaatatgcctattgagaatgaatcatatctcccataatatcctgcagagatattacagtctaacagcaacagaattagctcgcctatcaggaattcaaaaggctccaattcttcatcattttggggaaactttctatggagctgcaataattcgagcatttcgccaagaagaccggttctacagatcaaatctgagtctacttgacaatcattcaagaccatggtttcacttgatggctgcagtagaatggctctctttcagaatgaatttgttatgcaactttgtctttgggttctcgttggttttgcttgtgcgtcttccacaaggttttgttaatccaagtaagttttgacttgttcggacccatgaatttaattgaacgtaaactcatgctgttctaccgtcattcaaacttgaaggataaatatcttttttctggtataagggttgatgttctcttgctgcaaaacaggcattggtgggctggtagtgatgtatgcatggaatttgaatacacaattatcagaagccacccggaatataagtcgtgcagaagcaaacatgatatcagttgaaagaatattacagtacacaaagcttccaagtgaagccccaaccataaccgagggtagcaagccaccaatggcatggccagagtttggcatgataagcataagcaacttagaggtatggttctaaatgattagaaagaagatcataataattttatttcatactaagtatcagaggtgtacaccctttagttggcccagtaatgatattgcacatttaatcatacaggtcagatatgcagaacatctcccttcagtattaaaaaacataacttgtgtgattccagctgagaaaacagtaggtattgttggacgcacaggtagtgggaagtcaaccttagtacaagtactttttcggattgttgagccaagagaagggaccatcaagattgacagcatcgacatctgcaaaattggacttcatgatctgagatcgagaatatgtattctcccacaggatccggtgatgttcgatggtacaatcagaggaaatcttgatcccatgaacgagtacccagatagtaggatatgggaggtaagtgcagaaaacttacatgttacatcctaactagaatatatgacaaagcttttctatttgtatagacaatggttccataaatagcacaaatcatataaagcaaaaaaaatgggtaagcgtgaatagacgacaacaatatgaagtgaagatggtacagattgcgacccctatccaccagtaaatgaataagacctcaaaagcaagcatacaaactagaagtaattttagggtagatcaacagtagttttcattctgaagtaatgaactacccatgtcaggtagtagacaagtgtcagcttggcaatgtggtgcgctcgactgagaaaaagctggatgaaataggtactgctcagcattaaacttttgaaggaagacaaaaaaactgcaatgagtcctttaggaaaagaacatgttaatatgtagtttttctgaaatacttatgctactatgaatttatatttcattcgcagtaattgaaaatggggacaactggagcatgggacagcgacaactattttgtttaggcagaattctcctgaggaagagcaagatactagtccttgatgaggcaactgcttcagttgactctgctacagaccggattattcaagagataattcgtcaagaattcaaagattgcacagtgcttgcaattgcccataggatgaacactgttattgatagtgaccttattcttgttcttggtgaaggtaggtataccactacaatactaaaacaacctcagaatatcatgttgcacagctacgtcactctttaaatctgatatctctatgcaggtagtattttagaatacgacacccccaccaaactgctccagagagaggactctacattctctaagctaaccaaagagtactcacaacaatcgcagcacttcaagtcttcaacggcaatgcacaggatgggtagctactaattttcctgaagacatactacattctacatggctatattccccacgacacacctgaagtatccgcgccacagcaactcagcaaggggcagggaattgcttcgtagtccaagtaaaattttctaaatgttgcatgtaaaacctatgaatagcaaaacagcgtaaatgattaatttacagaaaaatggcact</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060231.1 RefSeq:Os04g0588700]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 4]]
 
−
[[Category:Chromosome 4]]
 

Latest revision as of 08:03, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information