Difference between revisions of "Os04g0648500"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
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GeneName = Os04g0648500|
 
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Description = BRCA1-associated 2 domain containing protein|
 
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Version = NM_001060610.1 GI:115460949 GeneID:4337211|
 
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Length = 5067 bp|
 
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Definition = Oryza sativa Japonica Group Os04g0648500, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
 
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AP = Chromosome 4:33393246..33398312|
 
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CDS = 33393427..33393588,33393670..33393724,33394039..33394103,33394195..33394338,33394462..33394515<br>,33394608..33394857,33394977..33395083,33396367..33396464,33397319..33397433<br>,33397534..33397642,33397725..33397840,33397925..33398284|
 
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GCID = <gbrowseImage1>
 
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name=NC_008397:33393246..33398312
 
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source=RiceChromosome04
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008397:33393246..33398312
 
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source=RiceChromosome04
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atgttcagccttctgatccagtccgtcgacttcaccgacgacgcggccgcggccgcggccaccgccgtcgccgccggcgaaaccagcggcacctctcaccccctctccccgcgctccggcgaccctctccccaccaccacctccgcctccgtaacggcgcctctcgagctgcccggcgcgacctccgcctcgcccgcccgaaaccctaagatcaactacacccgcggcatcctacacctctaccgctcctcctcctcctcctcgtcgaccgcctcctacgcttccgccgtcgccgccactccatcctcctcctcctccggacccgccgccccgcagctcgcctccgactgcctactcccgccatggcgcggcacacggctcctggtgctcgccgtcccaacccacgtctcaccagacgacttcgtccgcttctgcggcccttacatcgagcacgcctccgatatccatgtcgtcagggatgatggggtggaggaccggtatagcgtgctcgtggagtttgaggatcagaagagtgccgatgggttctacttggacctcaacggttggaggttctcgtcatccgaggtagaggtttgccatgttctgtttatagttgctgtccaatatacaccatcaaccaagcctgcggtgactccaccagttggatccactgagctcccaacatgtcctgtctgtattgaaagattggatcaagacatcagcggaattatggcaacgacttgtgatcattcgttccagtgttcatgtgtttcaatgtgggtcaattcatcttgtccggtttgccagttttgtcagaagcagtctaagaatcctacatgttctgtttgtcaaacctctggaaacctatggatctgtataatatgtggttttgttggatgtgggaggtatgaagaaggccatgcaattaggcactggaaagaaactcagcactgctattcacttgatttggaaactcaacgtgtttgggattatgttggtgacagttacgtccaccgacttaatcactccaaaagtgatgtgaagcattccaagttcaagtcaaagtgtaaatattctggtgacaaatgtgcaaactgctcctgcaatgatgaggaagatatcggtggtgctattttcagcagcaaagcagaaacaattgtggatgaatacaaccgtcttcttgctagccaacttgaaactcagagagagtattatgaggctcggctgtcagaagctaagaaagaaaaggaacaacacatttctgatgcagtggataaagctgtaaatgataagagtaaagaaatccaacaaaagattgagaatgcaatgttggagaaaaagaaacttgcagatatgaatgaaaaactcacgaagaaccaggatatatggcgtcgaacactaaaagaaattgaggaaagggagagggctcaactgaagttgaaagatgatacaattcgtgatctagaagaacagataaaagatttcaaattttccatcaagttacagaaatcgatcgagaagaataaaaatgctgatgatctcaaaggaggtttgctggtgccactcccaatggtgccagattctggaaccaaaggtaaaagatcgtcaagaacaagcaagaggaggaaccagtag</cdnaseq>|
 
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AA = <aaseq>MFSLLIQSVDFTDDAAAAAATAVAAGETSGTSHPLSPRSGDPLP                    TTTSASVTAPLELPGATSASPARNPKINYTRGILHLYRSSSSSSSTASYASAVAATPS                    SSSSGPAAPQLASDCLLPPWRGTRLLVLAVPTHVSPDDFVRFCGPYIEHASDIHVVRD                    DGVEDRYSVLVEFEDQKSADGFYLDLNGWRFSSSEVEVCHVLFIVAVQYTPSTKPAVT                    PPVGSTELPTCPVCIERLDQDISGIMATTCDHSFQCSCVSMWVNSSCPVCQFCQKQSK                    NPTCSVCQTSGNLWICIICGFVGCGRYEEGHAIRHWKETQHCYSLDLETQRVWDYVGD                    SYVHRLNHSKSDVKHSKFKSKCKYSGDKCANCSCNDEEDIGGAIFSSKAETIVDEYNR                    LLASQLETQREYYEARLSEAKKEKEQHISDAVDKAVNDKSKEIQQKIENAMLEKKKLA                    DMNEKLTKNQDIWRRTLKEIEERERAQLKLKDDTIRDLEEQIKDFKFSIKLQKSIEKN                    KNADDLKGGLLVPLPMVPDSGTKGKRSSRTSKRRNQ</aaseq>|
 
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DNA = <dnaseqindica>4725..4886#4589..4643#4210..4274#3975..4118#3798..3851#3456..3705#3230..3336#1849..1946#880..994#671..779#473..588#29..388#aacggcccaaaaagcccaggaagcaaacatgttcagccttctgatccagtccgtcgacttcaccgacgacgcggccgcggccgcggccaccgccgtcgccgccggcgaaaccagcggcacctctcaccccctctccccgcgctccggcgaccctctccccaccaccacctccgcctccgtaacggcgcctctcgagctgcccggcgcgacctccgcctcgcccgcccgaaaccctaagatcaactacacccgcggcatcctacacctctaccgctcctcctcctcctcctcgtcgaccgcctcctacgcttccgccgtcgccgccactccatcctcctcctcctccggacccgccgccccgcagctcgcctccgactgcctactcccggtaacctctcttccttggtaccatcttatttactaatttgttcatttccgcgtgttctcatgcctcatcgcctgcgtatctcagccatggcgcggcacacggctcctggtgctcgccgtcccaacccacgtctcaccagacgacttcgtccgcttctgcggcccttacatcgagcacgcctccgatatccatgtcgtcaggtgaattatccttctcgttgaagcaatttgtgtccgactttgcccgggaagctatggttttacatatgtgttgtgtcggtagggatgatggggtggaggaccggtatagcgtgctcgtggagtttgaggatcagaagagtgccgatgggttctacttggacctcaacggttggaggttctcgtcatccgaggttactaacattgtcgattggatgtatgtctagtttgctgatcatgtgtaacattgctcctaaattgggaagctcgctcgcttcttgttccatggtgtaggtagaggtttgccatgttctgtttatagttgctgtccaatatacaccatcaaccaagcctgcggtgactccaccagttggatccactgagctcccaacatgtcctgtctgtattggtgagcttatttatatttttctccttgttttgtggtcattcaacaatgtcagatatgaattttgtccactacaattttgcttcgtatcacctccccataggctgggaagatatcaatttgcaatgccccctctgatcaaaagattagccacttctcttctgagaaactacacctgtgaagttgagacttgagaagctacatactcaccacatgtttgtggtgtcttaggggctgtttggttgagtgccaacatttgccaaagttgtggcacccaagtttgaccaattaagcctagtgtttggttcatgccacaagtgagttatgccacaattttttagcaagttggctcacttgtcactgagttatttttttgccataacttgccacaattgtggccaacaaattcttagccatacaatgtgtggcatgccacactttgccaaatattttgtggtaaactatggaagtcatccacactttgccaaatatttcaccatatatatgttaaccttatttttggaggtatacattgcctatcgatttcggtactgttttttttctttctttctaaaagctgactttggggtgctatttttccaagctactactataccagtaagctctgtcaaatctagggaccatgttatttctccttgggcaatatggattacataattatagttaagacctttgttttcaggtctatctattaacttatgttgtttaactatctttgtgcaagtatgcataggtacacacttcctctgtttattgggaagagtttttctgaacattttaatgtatcattttttttctcatcttttcaccatcttcttatgcatgttatgaaacagaaagattggatcaagacatcagcggaattatggcaacgacttgtgatcattcgttccagtgttcatgtgtttcaatgtgggtcaattcatcttgtccggtaatgatcattttgacaatcaccatttctcaattagggcaacaaacaaccatttgttatggctgtgattcttttcctgcttacatttttacatgatactgaatttgcctcaattttatataaatttatgagtcaatccattctatgccattgacaaagcgtgggttctacaatatgccaccgacaaggctcagttctacaatataccattgaacaacttgttttcttccttatctgccattagtcaaccattagtcagatgcagctaagggaggaaaaatgaccaatgccatgttgcattaaataatcttggaagataaaaacacaatggattcctatttttcatcaatgagaaaaaatagtggatcatgaccaacgaaatccatgagcacacatgataccctaggggtaaaatggatatattctcgcccttagagcaggtacaatagcagactataagccagctataaacaatagcagtgcggactctaagacgtaatgtgtgtatgacaggtggggatcaggtattaatagtgtagtaagcaactattgtatgaattagctattacattggctatagatgatttggagctagtagttggctatactattaaacttgctcttaacatagtttgactaatggttgactagcggctatggcatataaggaagaaaactaattgctcgatggtatataatagaactgagctttgtgacatattgcagaatctgtgctttgtcaatggcatagaaatatagaatggattatctctaaatttatattcttccaattttgaatttttgagtaatcttctatggcactgattaacgtagtagttcgaattccataccaatacccaatatgtggccatttatcaagtgtgatcgaattccataacaatatccaataaaatatgtggtcatttatcaagtatgatattgtacatttgctactcagtaggaactaaccagggacagaggtcagggtcatttgcagaatgttcaccttctgtatttttcttgaagatcactgaatgtttatggcacctgtttacccgtgtcggtgaatcttaagacatattgcgctaaccagatttatggagcgtagagttgtagatgtgccaatgtctgcctatggctataatacaaatatattattgccaccactcaccactataaccatatgccattgatttccttgtattaagatcctccactgccttttcacattaccaagctttcttgatcatgacttgtttttattcataatatttctgtttcaggtttgccagttttgtcagaagcagtctaagaatcctacatgttctgtttgtcaaacctctggaaacctatggatctgtataatatgtggttttgttggatgtgggaggtatgctactctgctaattgaatttttggagcattttgcgaatctctttgtatttaataatctgaaggaaagaaagttaatggcatgattactgtttgtgaatttctttgttattacaggtatgaagaaggccatgcaattaggcactggaaagaaactcagcactgctattcacttgatttggaaactcaacgtgtttgggattatgttggtgacagttacgtccaccgacttaatcactccaaaagtgatgtgaagcattccaagttcaagtcaaagtgtaaatattctggtgacaaatgtgcaaactgctcctgcaatgatgaggaagatatcggtggtgctattttcagcagcaaagcagaaacagtaattgctttaagattcattcatttcagttaatctttgacacctcattgccagtctggttcctcaaatcacatatgcttttctcataacagattgtggatgaatacaaccgtcttcttgctagccaacttgaaactcagagagaggttcatcccttattagtgcttatcttttgatgtcacaatctgtactaccagagcttgtcatataatttacattacagtttatatctgatatatttatctgcctatgtttccttatattcatagtattatgaggctcggctgtcagaagctaagaaagaaaaggaacaacacatttctgatgcagtggataaagctgtaaatgataagagtaaagaaatccaacaaaagattgagaatgcaatgttggagaaaaagaaacttgcagatgtgagcatctcaaatcatgcacctttcagttattatcaagcatagttgctgtggttctttgacatgacttggtactttgcctttcctgcagatgaatgaaaaactcacgaagaaccaggatatatggcgtcgaacactaaaagaaattgaggaaaggtatgtttgacccttccaccagaaaatggaagtagatggcacagcgaaaggtgttggatcgtgctaatttgtgtgtgttggttgctctttttttttcctttcctttttttttttggggggggggggggtatatctttttcatgtactactttgtaaagaatctgcttgagccttgtccttttctgttaggcaaaaattggttatgtagcacccaaaattctggtttttagatttctagttttgcgttcctatcataaagatacacaactttccctttttctttcctgataaatctacacttctacactcaacagggagagggctcaactgaagttgaaagatgatacaattcgtgatctagaagaacaggtgctaaactctctttcctcttgaaaacactggagcttgtacaaaggccattagttaacatgccttatacaatttctgcagataaaagatttcaaattttccatcaagttacagaaatcgatcgagaagaataaaaatgctgatgatctcaaaggaggtttgctggtgccactcccaatggtgccagattctggaaccaaaggtaaaagatcgtcaagaacaagcaagaggaggaaccagtagctgcatctgttgtacatgtaacaagcaattgcttggctaatctgtgccaaccaggataatatgatacattctgaaaaaaagagagagtgcaatattattctactacagatagctgccttttatggaacagaatattgaacccaaggatagcatagtttaccatttgacattacatacaggg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060610.1 RefSeq:Os04g0648500]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 4]]
 
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[[Category:Chromosome 4]]
 

Latest revision as of 08:08, 14 May 2015

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Structured Information