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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0691900|
| |
| − | Description = Chaperonin Cpn60/TCP-1 family protein|
| |
| − | Version = NM_001060898.1 GI:115461525 GeneID:4337509|
| |
| − | Length = 5542 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0691900, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:35813156..35818697|
| |
| − | CDS = 35813377..35814372,35814457..35815293,35815398..35815732,35816102..35816228,35816325..35816483<br>,35816603..35817784,35817895..35818155,35818244..35818492|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:35813156..35818697
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:35813156..35818697
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgaatagtgtagtagagatcatggcgatcagttacccgccggaggatggccggtactactgttcttccgttgccgccggcgatgattcacctgcggcccatcatactaacgcccacgacgactgggactgggactgggtacccccaccccctgctgatgctgctgctgctgctgcggcggacgacgacgacgacgatggcgatccgactcctgctggtagtcctggcagcaggggcgaagacgaggaggaggagcggcagagggcgcagatggtgagcgccatgaacgggcagctgaacatgctggccagccggttcctggcatcggcgggcgtggaggaggagtggctggaggtggtgacggcgctgtcctgggaggcggcgctgctgatccagacccacgcctgcaccgccggcaacgacatggacccggcctcccacgtgaagatcaagtgcgtggcgtccggaaggcggcggcaaagccaggtggtgcgggggctggtgttccgcaagaacgcggcgcacaagcacatgcccaccaagtgccaccgccccaccctcctcctcctccacggcgccctcggcctcgactcccatctcggcttctcctccttcgactccatggagcaggacaagctcattctccgagcctccatctcccacatcatccacacctgcagccccaacgtcgtcatggtcgagaagaccgtctcccgcgacattcaggagctcctcctgcaccacggcgtcactctgctgctcgacatgaagctccaccgcttgcagagaatcgctcgctgttccggtgctcccttgctctccttctcccagcttctccatgattgccccaaccacctcaagcactgcgactacttccacatcgacaagttcttcgaggaccataacaccaccaccactactagtgctgctgccctgaacaagccatctaaaacattgatgttcttggaaggcttttccaacccattgggatgcaccatactgctcagaggcgcaagcacccaagaactgaagaaaatcaagcaagtcttgcactacacaatattcgctgcataccatctggttgttgagacatccttctttgaagatcagagggtattcttgaatgatacaaatgttgacgggacaccacaaatcactcatcagacttccattgtctcaaatcgttcacttcctactgattatgatgtcacttgtactagcaggggatcattactggaataccatgatggggatcacaaggctacagttcctttcacaaataaaccagactcgtacacacaagatgagggtacagccatccactgtgaagcacctccatctgaaaacctgctgtcctcagtctccggatcactcagaagattcattgatatattccgttatcagaatatttatttacctgtaacttcttctcaagatacaactggtcatcagaatgaacaagatactgaaaccagccaagaaacggcgtctgataccttaacaaaggatcattcttgtgagtatatggatcagttaaatgatctccaggaacaagtattcgccaaaaccaaccaaaaaatgtcacagcctgatcctttcggtactgaaaaacatcagcagaatgtggaacagtacagggccggcgaaaatataaattcagacacagatgaggctgatgatgtaatggattctcagagcatactcatcttgttatccagccaatgtgttacgaagcaggttgtctgtgaggagagccatctataccgcataaactattatgggaatttcgatgtctccttaggacgatatttgcaagacattttgcagaatcagaacctaagctgttcctcatgtggagagcctccagatgctcacatgtactcttacacccaccgcaatggaaatctaactattaatgtgaggcgtttgctgcctcagcatcatttgcctggtgaatctgaaggaaaaatttggatgtggactagatgtctaagatgtgagcatgagagagggatatccaaatcatctcggagagtgctaatatcaactgaagcgcgtaatctctcctttggcaagttccttgaactcagtttctcaagccactctgctgctagaaggctatcagtttgtgggcatttggtcaacagggactgcttgcgatattttgggttgggttccaaagttgcaaagttccaatattcatcagttgaaatttacactgcctgcaaaccgcaacgaacccttgagtttcacaatcccgatatgcgtgagtggttcgagcaagagggaagaaatgttcttgcgagaggagttaagcttttctatgaagtttctagcttaatacagcacatgaagattttctctgaggtggcaattaactgtggagactctcttcctgtcaaagaagtttcccaacttgaagagatgctaattgaagaaaaagctcagtttgtggattctctggtgaaggctgttgatgaaagcgggatgtctagctcctctgtgaatgagattcttggtgtaaattgtctctaccaggatcttctgattcgactgtacgtgtgggaccgtcgtttccatcaaattgttgagtgtaagtctggaagaatggctaattgtgtcggcaagaaggaagctgctgaatttgccggtgaaccagctgcaactggtgaaagtgcagtgccctttgagaatggatatatcaaggaaatgcagtacagcagcgaaaccttaactgatgaaaattcacggcgtgaggagcaacatatcacaaaagtgccttctttcagagtcttggaaggtacagatacgcagttgataaatcctgaatgtggggataacagggaaacatggatttggagtccattgcacgagttaagagagagttacaggcatgaactgcaggccgggtatttggaaagattcgaacttgtcaacaactattctccatctcatctatcccccctgcacaaacaatcatctgctgagttcatagttggtccaggtggcaatgtgttgtgcatatcagaggatgaaatatccagcataatatcccgcgcactggccatatcggaggaacgtcgccatcttttactagatgctctcatggttgaaggtgaggcagcctacagcagggggagtgagagctctaagatggagaaatcttacagctcattatctgaagcttcttcggcctcttcgtcgtggtcatctattggatcttcagactcagatgcaagcttttcatctgacgacctcttctccagctatgatagctcacttctgtcatccttacttcatcctgaagtatctgtcaatgggaaatcatctctcaaagggaaatactcggttatttgtgtacatgccaatcagttttacacccttcggaagaaatgctgcccatctgagcttgcatatatcacttccttgagccggtgcatgaagtgggatgctcaaggtggaaaaagtaaggctttctttgcaaaaacattggatgacaggttcatcatcaagcaaataaagaagacagagtttgaatccttcatagaattcgcacccgattactttaagcatgtgtatcattctctcgacactgggagccaaacttgtcttgccaaaattttaggaatctatcaggttaagcaaatcagacatggcaaggaagtgaagcttgatctgatggtgatggaaaatcttctcttcggacacaaattgtcaaggatatatgatctcaaaggtgttgttttctccagacatgtctctgattcgaatgaccatggaactgtttacttggatcaaaactttgtcgatgatatgcgtgtttcccctatatatgttggtggaagaacgaaacatctcttgcagcgggcaatctggaacgacacagcttttctcacttcaattaatgttatggactactcgttactggtgggagtggacaaagaaaagcatgagtttgtatttggcatcatagattacctaaggcagtatacatgggacaagcaactggagacgtgggtgaaaacttctttggtagtgccaaagaatgcttcaccaacagtaatctcacccaaagagtacaagaagaggtttaggaagttcatggccaagtatttcctgacagttccagacgattggagtacatag</cdnaseq>|
| |
| − | AA = <aaseq>MNSVVEIMAISYPPEDGRYYCSSVAAGDDSPAAHHTNAHDDWDW DWVPPPPADAAAAAAADDDDDDGDPTPAGSPGSRGEDEEEERQRAQMVSAMNGQLNML ASRFLASAGVEEEWLEVVTALSWEAALLIQTHACTAGNDMDPASHVKIKCVASGRRRQ SQVVRGLVFRKNAAHKHMPTKCHRPTLLLLHGALGLDSHLGFSSFDSMEQDKLILRAS ISHIIHTCSPNVVMVEKTVSRDIQELLLHHGVTLLLDMKLHRLQRIARCSGAPLLSFS QLLHDCPNHLKHCDYFHIDKFFEDHNTTTTTSAAALNKPSKTLMFLEGFSNPLGCTIL LRGASTQELKKIKQVLHYTIFAAYHLVVETSFFEDQRVFLNDTNVDGTPQITHQTSIV SNRSLPTDYDVTCTSRGSLLEYHDGDHKATVPFTNKPDSYTQDEGTAIHCEAPPSENL LSSVSGSLRRFIDIFRYQNIYLPVTSSQDTTGHQNEQDTETSQETASDTLTKDHSCEY MDQLNDLQEQVFAKTNQKMSQPDPFGTEKHQQNVEQYRAGENINSDTDEADDVMDSQS ILILLSSQCVTKQVVCEESHLYRINYYGNFDVSLGRYLQDILQNQNLSCSSCGEPPDA HMYSYTHRNGNLTINVRRLLPQHHLPGESEGKIWMWTRCLRCEHERGISKSSRRVLIS TEARNLSFGKFLELSFSSHSAARRLSVCGHLVNRDCLRYFGLGSKVAKFQYSSVEIYT ACKPQRTLEFHNPDMREWFEQEGRNVLARGVKLFYEVSSLIQHMKIFSEVAINCGDSL PVKEVSQLEEMLIEEKAQFVDSLVKAVDESGMSSSSVNEILGVNCLYQDLLIRLYVWD RRFHQIVECKSGRMANCVGKKEAAEFAGEPAATGESAVPFENGYIKEMQYSSETLTDE NSRREEQHITKVPSFRVLEGTDTQLINPECGDNRETWIWSPLHELRESYRHELQAGYL ERFELVNNYSPSHLSPLHKQSSAEFIVGPGGNVLCISEDEISSIISRALAISEERRHL LLDALMVEGEAAYSRGSESSKMEKSYSSLSEASSASSSWSSIGSSDSDASFSSDDLFS SYDSSLLSSLLHPEVSVNGKSSLKGKYSVICVHANQFYTLRKKCCPSELAYITSLSRC MKWDAQGGKSKAFFAKTLDDRFIIKQIKKTEFESFIEFAPDYFKHVYHSLDTGSQTCL AKILGIYQVKQIRHGKEVKLDLMVMENLLFGHKLSRIYDLKGVVFSRHVSDSNDHGTV YLDQNFVDDMRVSPIYVGGRTKHLLQRAIWNDTAFLTSINVMDYSLLVGVDKEKHEFV FGIIDYLRQYTWDKQLETWVKTSLVVPKNASPTVISPKEYKKRFRKFMAKYFLTVPDD WST</aaseq>|
| |
| − | DNA = <dnaseqindica>222..1217#1302..2138#2243..2577#2947..3073#3170..3328#3448..4629#4740..5000#5089..5337#atgcatattttgttccagattatcgatggtggacaggacaggagccaactgcaacaagatatactcattctcgatcgatttctaagagatacctagacacttgctcctcctgctataaggtaattaacgcttcgctagctaattaattgcattagtttcaattctttttatgatcttctttcgatcgagcaaataactcaagtaagtgcatgcatatatagatgaatagtgtagtagagatcatggcgatcagttacccgccggaggatggccggtactactgttcttccgttgccgccggcgatgattcacctgcggcccatcatactaacgcccacgacgactgggactgggactgggtacccccaccccctgctgatgctgctgctgctgctgcggcggacgacgacgacgacgatggcgatccgactcctgctggtagtcctggcagcaggggcgaagacgaggaggaggagcggcagagggcgcagatggtgagcgccatgaacgggcagctgaacatgctggccagccggttcctggcatcggcgggcgtggaggaggagtggctggaggtggtgacggcgctgtcctgggaggcggcgctgctgatccagacccacgcctgcaccgccggcaacgacatggacccggcctcccacgtgaagatcaagtgcgtggcgtccggaaggcggcggcaaagccaggtggtgcgggggctggtgttccgcaagaacgcggcgcacaagcacatgcccaccaagtgccaccgccccaccctcctcctcctccacggcgccctcggcctcgactcccatctcggcttctcctccttcgactccatggagcaggacaagctcattctccgagcctccatctcccacatcatccacacctgcagccccaacgtcgtcatggtcgagaagaccgtctcccgcgacattcaggagctcctcctgcaccacggcgtcactctgctgctcgacatgaagctccaccgcttgcagagaatcgctcgctgttccggtgctcccttgctctccttctcccagcttctccatgattgccccaaccacctcaagcactgcgactacttccacatcgacaagttcttcgaggaccataacaccaccaccactactagtgctgctgccctgaacaagccatctaaaacattgatgttcttggaaggcttttccaacccattgggatgcaccgtaagcactcgatcaaatactccatttcattcaattacctagatcaattactctgcattattctcaatacgcgcgcgcatgcagatactgctcagaggcgcaagcacccaagaactgaagaaaatcaagcaagtcttgcactacacaatattcgctgcataccatctggttgttgagacatccttctttgaagatcagagggtattcttgaatgatacaaatgttgacgggacaccacaaatcactcatcagacttccattgtctcaaatcgttcacttcctactgattatgatgtcacttgtactagcaggggatcattactggaataccatgatggggatcacaaggctacagttcctttcacaaataaaccagactcgtacacacaagatgagggtacagccatccactgtgaagcacctccatctgaaaacctgctgtcctcagtctccggatcactcagaagattcattgatatattccgttatcagaatatttatttacctgtaacttcttctcaagatacaactggtcatcagaatgaacaagatactgaaaccagccaagaaacggcgtctgataccttaacaaaggatcattcttgtgagtatatggatcagttaaatgatctccaggaacaagtattcgccaaaaccaaccaaaaaatgtcacagcctgatcctttcggtactgaaaaacatcagcagaatgtggaacagtacagggccggcgaaaatataaattcagacacagatgaggctgatgatgtaatggattctcagagcatactcatcttgttatccagccaatgtgttacgaagcaggttgtctgtgaggagagccatctataccgcataaactattatgggaatttcgatgtctccttaggacgatatttgcaagacattttgcagaatcaggtacctatctatttttttaggaataatttcgataacacatgacatagtaggtcaattgtatatctactagtcaggatgtgatgttttttactgaactgtggcagaacctaagctgttcctcatgtggagagcctccagatgctcacatgtactcttacacccaccgcaatggaaatctaactattaatgtgaggcgtttgctgcctcagcatcatttgcctggtgaatctgaaggaaaaatttggatgtggactagatgtctaagatgtgagcatgagagagggatatccaaatcatctcggagagtgctaatatcaactgaagcgcgtaatctctcctttggcaagttccttgaactcagtttctcaagccactctgctgctagaaggctatcagtttgtgggcatttggtcaacagggactgcttgcgatattttgggtatgtattctcatttctcaagaactattttgaacatgtcgtgtaaaagttctctctatataatactccctccgtattttaatgtataacaccgttgacttttcgaccaacgtttgaccattcgttttatttaaaattttcgtgcaaatatgaaagtatttatatcatgcttaaagaacatttgatgatgaatcgagtcataataaaataaatgataattgtataaattttttgaataaaatgaatggtcaaacgttggataaaaaatcaacggcatcatacattaaaatatggaggtagtacatactaaacatcctttagcccttctttatttctttcttcttttgttggaaaaaatggtgacttcaggttgggttccaaagttgcaaagttccaatattcatcagttgaaatttacactgcctgcaaaccgcaacgaacccttgagtttcacaatcccgatatgcgtgagtggttcgagcaagagggaagaaatgtatgtactattttatttatcggtttcatcacatgatttatcttgtgaacattcataggtcagattgggcctaatgcttgtgttgcactttttaaggttcttgcgagaggagttaagcttttctatgaagtttctagcttaatacagcacatgaagattttctctgaggtggcaattaactgtggagactctcttcctgtcaaagaagtttcccaacttgaagagatgctaattgaagaaaaagctcagtttgtggtaaaccttctggtcttttttcttctctttaccttgtggtaactggtaagcctagagataagtgtgcattctaatcatctccgataactgtcaattccaatatgaatatcatcaaacaggattctctggtgaaggctgttgatgaaagcgggatgtctagctcctctgtgaatgagattcttggtgtaaattgtctctaccaggatcttctgattcgactgtacgtgtgggaccgtcgtttccatcaaattgttgagtgtaagtctggaagaatggctaattgtgtcggcaagaaggaagctgctgaatttgccggtgaaccagctgcaactggtgaaagtgcagtgccctttgagaatggatatatcaaggaaatgcagtacagcagcgaaaccttaactgatgaaaattcacggcgtgaggagcaacatatcacaaaagtgccttctttcagagtcttggaaggtacagatacgcagttgataaatcctgaatgtggggataacagggaaacatggatttggagtccattgcacgagttaagagagagttacaggcatgaactgcaggccgggtatttggaaagattcgaacttgtcaacaactattctccatctcatctatcccccctgcacaaacaatcatctgctgagttcatagttggtccaggtggcaatgtgttgtgcatatcagaggatgaaatatccagcataatatcccgcgcactggccatatcggaggaacgtcgccatcttttactagatgctctcatggttgaaggtgaggcagcctacagcagggggagtgagagctctaagatggagaaatcttacagctcattatctgaagcttcttcggcctcttcgtcgtggtcatctattggatcttcagactcagatgcaagcttttcatctgacgacctcttctccagctatgatagctcacttctgtcatccttacttcatcctgaagtatctgtcaatgggaaatcatctctcaaagggaaatactcggttatttgtgtacatgccaatcagttttacacccttcggaagaaatgctgcccatctgagcttgcatatatcacttccttgagccggtgcatgaagtgggatgctcaaggtggaaaaagtaaggctttctttgcaaaaacattggatgacaggttcatcatcaagcaaataaagaagacagagtttgaatccttcatagaattcgcacccgattactttaagcatgtgtatcattctctcgacactgggagccaaacttgtcttgccaaaattttaggaatctatcaggtaggtgtacttaatttacatcagacgtgctatggaataatttcatgattttttttccctccttggttgttatacatccttttaaggaccgggctcactatttgtttcaggttaagcaaatcagacatggcaaggaagtgaagcttgatctgatggtgatggaaaatcttctcttcggacacaaattgtcaaggatatatgatctcaaaggtgttgttttctccagacatgtctctgattcgaatgaccatggaactgtttacttggatcaaaactttgtcgatgatatgcgtgtttcccctatatatgttggtggaagaacgaaacatctcttgcagcgggcaatctggaacgacacagcttttctcactgtaagtactgatatttcatttcaaccacgtataaccaatcatgttctctcttacaatatgagctgacagaaatactaaatttttgcagtcaattaatgttatggactactcgttactggtgggagtggacaaagaaaagcatgagtttgtatttggcatcatagattacctaaggcagtatacatgggacaagcaactggagacgtgggtgaaaacttctttggtagtgccaaagaatgcttcaccaacagtaatctcacccaaagagtacaagaagaggtttaggaagttcatggccaagtatttcctgacagttccagacgattggagtacatagatagaaacgtctggggtcctgcaaatcctgtccattatctgttttgtttgtacacagtagaatggaacgctcacttgtttaaagttctccaatagtttgcagttttaaggcaaaattttggagcgaggcccaaatacatgatcaaaatcattgatccctcacatgtattggttactggtttgtggtagaaaaaaaagtttgtatc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060898.1 RefSeq:Os04g0691900]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
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Annotated Information
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Structured Information
