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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0107300|
| |
| − | Description = Conserved hypothetical protein|
| |
| − | Version = NM_001060959.1 GI:115461648 GeneID:4337571|
| |
| − | Length = 8428 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0107300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:389137..397564|
| |
| − | CDS = 389361..389602,389730..389943,390990..391279,391771..391947,392092..392868<br>,392959..393032,393144..393206,393306..393394,393493..393588<br>,393706..394365,395000..395074,395809..395879,395965..396022<br>,396287..396491,396587..396637,396766..397256|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:389137..397564
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:389137..397564
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggccggaaccctccgcgaccccagcgccgggtcgggcggcgaagcggcgcccactcctcctcctcctcccgtggccgcgcccttcgcccagtacctctcgctggaacctcttggctgggtggagcccaagcactcgcgccacggcgagctcaggagggcgctccagcaccaggcggacgacaagccccaagagctcaggcggatccgctccagcgtagccgactcctcctccaaggccagggagaaggtgaggtcaatgcaggaggcggtgcagaaggtggacaggtgcaggaacgtgctcaatcggaagcgccagaggagtgagcctgctgctgctgctgctgctggggctgaaaagccctctggttccggtgcactcaggattggagcccagaacagcaactcttctgcggtcatgagcaagcgtgtccgctcctcgctggcggatggacggttggaaggacgcagtaatatttctacaaggcaaagccctttagttaataatgagaaaagctcacttgtggagaaggaaaaaagttgtggacgaacatctgggctgtccgaagacaaattacagggtttatctactggaggtgaaggttgggagaaaaaattgaaacgcaagcgctccattggaacagtgcttaacagaggcaatgatgctgatcgagatgttaaatccgggggtcaacacagaccagccaatgaagcaaacccacgacctagtgatggtccttcacatagacatggagcatctgccgtagaatatgcaggtagcaggatggatggaagttctcagcagaatagcaactcatcccgtattctatgcaagacagatatggatcatgccactctgccaaatgaaagaagagagcggtatgttggaattgaaaaggagcggggtatggtaaaaggaaacagagcacaagcttctgaagatatgcaaactggaagcatcagtcctttgcccaaggctaaagcatgcagggcaccgagaaccggttcacacggcatgggttcagcttctagtttccaacgttcaactggaggaagcgacgaatgggaagaaataccatactcaaataaagcatcacttttgggaggcatgacaaaccgcaaacgttccatacattcaaatgcttcttcacctcctattgcttgggtcggtcaacgtccacagaaaatgtcacggacaagacgagcaaacgttgtttctccggtctcaaattttgatgaagtcctatctgaaggatcaccacttgatacagctattgctgctaaaccaacatctacagagtcctgcggtgttgtgcttacaaaaaagggaactagtagcaatacacaaatggcaaacacaatgaatgatatcccttctcctgttggattgtcagaaagtgagggatcagctgttaaagaacgcaaggtcaaggagaaagctacaaacaatggtgaggtggagaacgaggctgcaaatctagtccgtaattcagcaggatcaatagtttcatcaaacaaaaatacgattcctttgaaagaagagcttcaagatggtggtgtccgtcgtcaagggaggagtggcagaggtactatgcatgttaaagagtactcttcctcttccatatcgaaagaaaaattagatgctgcagagacaagaaagccaaacaaaggtgggcgacctggatctgaaaagaatgaaagtaaggtggggcgtcccacaatgaagaaaggttctgatcaaaacaatttgtcatgtttccctcaggctcttaattgtgaacacacagatgaccgagaagaacttttagctgctgtaaatgctgctcgcggcgctattgttggtgcatattgtggcccattttggaagaaaatggaacccatgctaactttcataagctctgaaaatttgtctttcttaaaaaaacagattgacattgttgaagagcttgatttgggcatgtcttgcgtgcctgatggtgaatatgttttagcacccaccaattacagcaggcagcaaacgacggagttttcatgtcaggagctagttccatctaattcgtctatcttacctgagcaaagcgaaaccaatggagttggattaaaaggaactattgactgtttttctcctagtgaggaaaaccaacaccatgtaccacaaaagatagaagctgacaaatggtttcatgagatggtcccaatggaacacagactcctttcagctatagttatggaagaggacatctcggaacccaatgttgtacaaagggatatactttttgaattttctaatagccatgttccttgcgctgcaagcagattcttaggaaatgaacttcaggctagtgccatatcatctaattttggattgagtgttgatttcatgaactcaaacaattcttcggttgtacatcaaagcctgagcaatgggttcacatcttccagcagtttcatcagttcaagtagtcaaagttcagtccataatgataatttgtctgatgaagtcaatttcgtataccctgaaaatggcccttttgataacttgataccgcagacttcttcactacgtcaaaagccaggaaaaaacttctcttcatctccacatgaataccaatatggacagatgtctgtgaatgataagattttcatcgagcttcaaagtattggcattttcccggaggcagtgccaaagctagatgatggagaggacaataacatcaataaaatgatttcagagttgaggaaaaggctgcatgatcaggtgaagcaaaagaaatgtaaattaagtaagttagagaaagcaattcaagatacaaaaagtatcgaggagaggagcttggagcaacatgcaatgaataaattggttgaaagggcataccgaaaacttaagggtgggcgaactggttctagtcacaaggctggtgctagtaagtctgccagcaaggctgcaaaacagcttgctttggattttgccaagcgtactctcttgcggtgccaaaaatttgaggaaacaaagaaaagctgcttcagtgagccttccctttggagtgttctatctgcgcccttgccaagcagcggcacaaaatctacagaaggcgtagagagactgaagcatcaaaagcaagacagaagtactttaaatcatggtggcacaaaatggaacaagtgtgatagggaaagggaacacagcagagatgcatctgccaagggttctggtacgaagtcagggcgtcattcatcaggcagtgggaggagtggtgaacgtaaaaacaagacaaagccgaagcaaaagatagtacagctattatcgacttctggaaatgttcttgatagagctgtggagtcggttccaacaccggcaatgcaggagccccctcgaccgtcagttcctctgggtgcaaaaattacccagcaaccaaggaaccatcctgagaatgctgcttcacgattgccggaggctcccctgaccaatttgcctggattatttgatatatttgctggaacagaagggcttggcgaacagggcaacgatatcagttcttggcttactgatgatcttgatgtaccacaagactttgatctttcaggcgccttagaaatcccactggacgacattgctgagctgggttttatgtaa</cdnaseq>|
| |
| − | AA = <aaseq>MAGTLRDPSAGSGGEAAPTPPPPPVAAPFAQYLSLEPLGWVEPK HSRHGELRRALQHQADDKPQELRRIRSSVADSSSKAREKVRSMQEAVQKVDRCRNVLN RKRQRSEPAAAAAAGAEKPSGSGALRIGAQNSNSSAVMSKRVRSSLADGRLEGRSNIS TRQSPLVNNEKSSLVEKEKSCGRTSGLSEDKLQGLSTGGEGWEKKLKRKRSIGTVLNR GNDADRDVKSGGQHRPANEANPRPSDGPSHRHGASAVEYAGSRMDGSSQQNSNSSRIL CKTDMDHATLPNERRERYVGIEKERGMVKGNRAQASEDMQTGSISPLPKAKACRAPRT GSHGMGSASSFQRSTGGSDEWEEIPYSNKASLLGGMTNRKRSIHSNASSPPIAWVGQR PQKMSRTRRANVVSPVSNFDEVLSEGSPLDTAIAAKPTSTESCGVVLTKKGTSSNTQM ANTMNDIPSPVGLSESEGSAVKERKVKEKATNNGEVENEAANLVRNSAGSIVSSNKNT IPLKEELQDGGVRRQGRSGRGTMHVKEYSSSSISKEKLDAAETRKPNKGGRPGSEKNE SKVGRPTMKKGSDQNNLSCFPQALNCEHTDDREELLAAVNAARGAIVGAYCGPFWKKM EPMLTFISSENLSFLKKQIDIVEELDLGMSCVPDGEYVLAPTNYSRQQTTEFSCQELV PSNSSILPEQSETNGVGLKGTIDCFSPSEENQHHVPQKIEADKWFHEMVPMEHRLLSA IVMEEDISEPNVVQRDILFEFSNSHVPCAASRFLGNELQASAISSNFGLSVDFMNSNN SSVVHQSLSNGFTSSSSFISSSSQSSVHNDNLSDEVNFVYPENGPFDNLIPQTSSLRQ KPGKNFSSSPHEYQYGQMSVNDKIFIELQSIGIFPEAVPKLDDGEDNNINKMISELRK RLHDQVKQKKCKLSKLEKAIQDTKSIEERSLEQHAMNKLVERAYRKLKGGRTGSSHKA GASKSASKAAKQLALDFAKRTLLRCQKFEETKKSCFSEPSLWSVLSAPLPSSGTKSTE GVERLKHQKQDRSTLNHGGTKWNKCDREREHSRDASAKGSGTKSGRHSSGSGRSGERK NKTKPKQKIVQLLSTSGNVLDRAVESVPTPAMQEPPRPSVPLGAKITQQPRNHPENAA SRLPEAPLTNLPGLFDIFAGTEGLGEQGNDISSWLTDDLDVPQDFDLSGALEIPLDDI AELGFM</aaseq>|
| |
| − | DNA = <dnaseqindica>225..466#594..807#1854..2143#2635..2811#2956..3732#3823..3896#4008..4070#4170..4258#4357..4452#4570..5229#5864..5938#6673..6743#6829..6886#7151..7355#7451..7501#7630..8120#gtgcgatttcttcttcttcgtgttgttgcattgcaattgcaccccacccccatctccccctctcgcctcgcgcgagatcaatcgagaccccgccggcgaatccctcgccggagcggcgcagcgcctccgcctccgcctccgcgcgattaattccggcaaccgcggagtccttcgcccgcgctcgccgcatttcatgccctaggaggctgccgtctcggccccccatggccggaaccctccgcgaccccagcgccgggtcgggcggcgaagcggcgcccactcctcctcctcctcccgtggccgcgcccttcgcccagtacctctcgctggaacctcttggctgggtggagcccaagcactcgcgccacggcgagctcaggagggcgctccagcaccaggcggacgacaagccccaagagctcaggcggatccgctccagcgtagccgactcctcctccaaggccaggtactccaaaccctcctccacattgcaatcccctctcaattcctcaattttgccagacacagtgtacacagtgtcagttaattcgactcgattttaatttgtggtggtgttgcatcgagtcgagtagggagaaggtgaggtcaatgcaggaggcggtgcagaaggtggacaggtgcaggaacgtgctcaatcggaagcgccagaggagtgagcctgctgctgctgctgctgctggggctgaaaagccctctggttccggtgcactcaggattggagcccagaacagcaactcttctgcggtcatgagcaagcgtgtccgctcctcgctggcggatggacgggttcgtgtgctttctccattgctcgcgtcgccatctctgtttaactctactatacattaattgtgcttgctccaatcaaaatcatgtattacattggggtagtcgtagtcactgtgtgagtttgggggtattcaaaaccaccgtaagctcatcaactacttgcatgtctggcgagcgcgattccgtgacctgagcgtcgcatgttagcagttggtgcaaatgggttggatggaaaccagaaccaacagccctatcttgtattgattccccttggagtttgaaatgtggggtgtcaacattggtttggtttgataatcctgaatgtctttactcacttatggcctcaacgtattgttttcaatttgcaacaatattagatgtaatgtataggttgagttcactatggtagtctttacagtcctgatcttccttataatgtgtagcttaaacatgtagtaccttttgttctgctaaagtgctgaactgctagtccctggcttcgtgccatctgcactgccctaccattattcttggttatttagtggtggaaatcatttaaattccagttaactttattagttgagatattgaatgatgggatgattgcataataaaccacacagttatcccagaagaccatacagtacaagggtgtgcaggcggtgattgtgctttaattcaccactgaataacctatatttgctatcagaccttgaatctctctgactaatttaatcattacataattcacacacagtcctcaaacttgaaccaaaccgcaaacttgctagtttcctaagggtaggcttggtctgtgaataatgggttcctggcactgactgaacaaatatatctgatatttttaattactgtggcccagcacatttcagtgccagaagacatctaaaacctcaagttctaaaagacacttgttgtcttctgcattttatacaacttctataatagattatttccatgtatccatattccctgtgacacgatttgccatttttcagaacttatttcattatatgtgcatatttcagttggaaggacgcagtaatatttctacaaggcaaagccctttagttaataatgagaaaagctcacttgtggagaaggaaaaaagttgtggacgaacatctgggctgtccgaagacaaattacagggtttatctactggaggtgaaggttgggagaaaaaattgaaacgcaagcgctccattggaacagtgcttaacagaggcaatgatgctgatcgagatgttaaatccgggggtcaacacagaccagccaatgaagcaaacccacgacctagtgatggtccttcacataggtaatcatgtcagtgtgcttaccattattcttgttccttcaatatggacataagtttttttttttgtgacagaccagccatgttcaactttctctcaggcgattagtctaattgaataccaaacttaagctcaatagtctggaaattactcacaaataattaggtgaatgagttctctactaattgagcggtagtacactgaattgaatagggaacggggctgacatgcactacattgttaagtcaaacattggttctattactatatatatgcccctcatcagaagactggttttgagattttatttttgacctctaccttgggctgatctgctgtttattttgtttggcccatgtagattgtattaagctgcaattgaatatatgctgtttatgtttccacttttaatcctcttccagaactatatgtggttatttgatctgttccagcttattgtctctactcacccttctttatccttacattgcagacatggagcatctgccgtagaatatgcaggtagcaggatggatggaagttctcagcagaatagcaactcatcccgtattctatgcaagacagatatggatcatgccactctgccaaatgaaagaagagagcggtatgttggaattgaaaaggagcggggtatggtaaaaggaaacaggtaagcacagttcattacttcattctggcgtatacccatagaattcctctcctcatagtttacaattattgttttttatatatgtgtgaatgagcagtacaatgctatcattgttctaatgatctgctaactctacatgtatagagcacaagcttctgaagatatgcaaactggaagcatcagtcctttgcccaaggctaaagcatgcagggcaccgagaaccggttcacacggcatgggttcagcttctagtttccaacgttcaactggaggaagcgacgaatgggaagaaataccatactcaaataaagcatcacttttgggaggcatgacaaaccgcaaacgttccatacattcaaatgcttcttcacctcctattgcttgggtcggtcaacgtccacagaaaatgtcacggacaagacgagcaaacgttgtttctccggtctcaaattttgatgaagtcctatctgaaggatcaccacttgatacagctattgctgctaaaccaacatctacagagtcctgcggtgttgtgcttacaaaaaagggaactagtagcaatacacaaatggcaaacacaatgaatgatatcccttctcctgttggattgtcagaaagtgagggatcagctgttaaagaacgcaaggtcaaggagaaagctacaaacaatggtgaggtggagaacgaggctgcaaatctagtccgtaattcagcaggatcaatagtttcatcaaacaaaaatacgattcctttgaaagaagagcttcaagatggtggtgtccgtcgtcaagggaggagtggcagaggtactatgcatgttaaagagtactcttcctcttccatatcgaaagaaaaattagatgctgcagagacaagaaagccaaacaaaggtgggcgacctggatctgaaaagaatgaaaggtactcatgcttccttttggtaagggttggcaacttgctgcattttactttcgatgtagaactgatttgattctttaaacgtctgtacagtaaggtggggcgtcccacaatgaagaaaggttctgatcaaaacaatttgtcatgtttccctcaggctcttaattgtgagtctagacatctaaagattttctgaaacgcttatctatgtactttggccgtttacattaaattttggcattagcttatatatcttactaactagtggtgcaatgcaggtgaacacacagatgaccgagaagaacttttagctgctgtaaatgctgctcgcggcgctattggtgtgtatacagtcttatctgatttttgcctgatgaactttgtcagcatctctttggattgacactttatacctttcttattcccttttttttgtgcagttggtgcatattgtggcccattttggaagaaaatggaacccatgctaactttcataagctctgaaaatttgtctttcttaaaaaaacaggttggtacccagtatgcttctgatgtgtcatgatgattgactacttatttccttgttggattgggatggattctcacttattgagagtttgtggacagattgacattgttgaagagcttgatttgggcatgtcttgcgtgcctgatggtgaatatgttttagcacccaccaattacagcaggcagcaaacgacggtatgttactttttgtgccattagctatttgaagagagggaaatctttccctcctttcatgcaattcatctctcatggagtgtgtatccttacatcgcatgtcccaaaaatctgcaggagttttcatgtcaggagctagttccatctaattcgtctatcttacctgagcaaagcgaaaccaatggagttggattaaaaggaactattgactgtttttctcctagtgaggaaaaccaacaccatgtaccacaaaagatagaagctgacaaatggtttcatgagatggtcccaatggaacacagactcctttcagctatagttatggaagaggacatctcggaacccaatgttgtacaaagggatatactttttgaattttctaatagccatgttccttgcgctgcaagcagattcttaggaaatgaacttcaggctagtgccatatcatctaattttggattgagtgttgatttcatgaactcaaacaattcttcggttgtacatcaaagcctgagcaatgggttcacatcttccagcagtttcatcagttcaagtagtcaaagttcagtccataatgataatttgtctgatgaagtcaatttcgtataccctgaaaatggcccttttgataacttgataccgcagacttcttcactacgtcaaaagccaggaaaaaacttctcttcatctccacatgaataccaatatggacagatgtctgtgaatgataagattttcatcgagcttcaaagtattggcattttcccggaggcagtggtatggttacttaaaactctgcatttctggggaaagtatctgcatcgcaatacttcagttctgctttctgcagttcttttaagtctgtatgccaaaatttcaggaaacttgttaaaatttaaaagtagcaactttgtaattgacaaaattttagcaactttgatggtgattatagtttttctctttctttaatgttgcatctatttaccctgccatccttccttatgtggtttatgcatagaattattttttgtcggacagtgtgaatctcatcatgagcaagataaaggttaaagtgggaagctgtgctatatggttgttatttgtcatagtttaaggaatcttgtaaagtagccatcaacactgatgatttctgaatgatattcagttctttatcagttaagcctaaacattggtagtcacagtatgcagtcactatactctgttagttatccatgaaaaagaatctataggattgtatttagtgcacaagtgttatttatttctggtgactaatgtcattttctgttgcattctttgtaaaatcttttcacaggatgttgaagtttatgtaattacctagtaaattcctattgtgattcttgtcttatcttgcaaatactacccttttcagccaaagctagatgatggagaggacaataacatcaataaaatgatttcagagttgaggaaaaggctgcatgatcaggttacatcaacaaccactcctagtattatgtcctcaactctaattatatctggatgcttaccttattactcttatactcatctattattttacaatgattgcgttagatccttgtaaaatgtaaaccatcaaaatatttgtcatattactgaaacttgttttgttctaaggacttcttttccaaaatatttcttgaaacacgtggacaatttgtgaagttggcttgcccatcttgtatcaacatgtgctagaagtataggagccatgaaaattatgcattaagtgacatcaattggcatgggaaaatatagattgagaatgtgccatcgattattttctgggataactatcagatgttatttgaatgccatcgtactttgattaattcctgcttgtaatgctggtagcgtcacagccgcttgaccagattggaatagtatatatcaaggtgacaaggtaggctgccagatcactataagatgaaagggtatatatgcaaagtggaataattcaaataagtcatttaaaaaattccaatgactggctctaagccagtaaaccttctagatttaagccagtaaaccttctagattcaacctactggctaaggccgatgatccttgttatcctgttttgagatcagttcatgtattactatattctggaagattaaaatacttttatgattttcactttacctcttatttatgtatatcaaaatggtaccattgcaggtgaagcaaaagaaatgtaaattaagtaagttagagaaagcaattcaagatacaaaaagtatcgaggagaggtatggattttatgttcttggattagatcttagaggcttagtgcattgagttgcttcactggctaacattaagattttctgtcaggagcttggagcaacatgcaatgaataaattggttgaaagggcataccgaaaacttaaggtagtataaacttatctctacatgattggtttttcaatgttatgttggactacttgttcttctaaaatccaagttcccttaatagttatgcaaagttaatcagttgagtcatagatatttttttatttctttattaatccttgtgaggtcaacccatgttgatgatgccttctaattgcaatatttttgttccagcaaaaagaaagggtaatgcagatgaaaactgtttgacttggacactgactgtatctttatgaattgtagggtgggcgaactggttctagtcacaaggctggtgctagtaagtctgccagcaaggctgcaaaacagcttgctttggattttgccaagcgtactctcttgcggtgccaaaaatttgaggaaacaaagaaaagctgcttcagtgagccttccctttggagtgttctatctgcgcccttgccaagcagcggcacaaaatctacagaaggtaatacatgtgcaactttgataagagagattagtatgcatttttttctgcccaatcaaatataatttcatgccttctttcgttctggtattaaggcgtagagagactgaagcatcaaaagcaagacagaagtactttaaatcatggtaattcttacgctccttgttagggccctaggggaatcatgagggaaaatttacaaggtgctatttgcagtactagaagtccactcgtgcttcataaactaatcaatttgtcctttatccgtttttaggtggcacaaaatggaacaagtgtgatagggaaagggaacacagcagagatgcatctgccaagggttctggtacgaagtcagggcgtcattcatcaggcagtgggaggagtggtgaacgtaaaaacaagacaaagccgaagcaaaagatagtacagctattatcgacttctggaaatgttcttgatagagctgtggagtcggttccaacaccggcaatgcaggagccccctcgaccgtcagttcctctgggtgcaaaaattacccagcaaccaaggaaccatcctgagaatgctgcttcacgattgccggaggctcccctgaccaatttgcctggattatttgatatatttgctggaacagaagggcttggcgaacagggcaacgatatcagttcttggcttactgatgatcttgatgtaccacaagactttgatctttcaggcgccttagaaatcccactggacgacattgctgagctgggttttatgtaagtaaggaaacgaaccaattgttctttatcctgcgccgtgaatatgtggggagtttggacatgatgttagtaggtttaccctacctaatgggtataagtagagttaaccgattgttttctctgcctcaatctggcaagagctttaagtgtttaactaggttggtcggtcgttttttatctcattgaactgttgatagccgctaggtaaacttattggcagaagaagacgaggtattctattgattcctcgtgattgtgctgagtttatcaacttgtgaatatgaatgagcttggttcgttgccaattgg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060959.1 RefSeq:Os05g0107300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
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Annotated Information
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Structured Information
