Difference between revisions of "Os05g0110400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0110400| Description = GRAS transcription factor domain containing protein| Version = NM_001187245.1 GI:297723620 GeneID:9271968| Length = ...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
GeneName = Os05g0110400|
 
Description = GRAS transcription factor domain containing protein|
 
Version = NM_001187245.1 GI:297723620 GeneID:9271968|
 
Length = 6573 bp|
 
Definition = Oryza sativa Japonica Group Os05g0110400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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Please input expression information here.
AP = Chromosome 5:532753..539325|
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CDS = 532753..534690,535428..535493,536572..538644,539239..539325|
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===Evolution===
GCID = <gbrowseImage1>
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Please input evolution information here.
name=NC_008398:532753..539325
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source=RiceChromosome05
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You can also add sub-section(s) at will.
preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
GSID = <gbrowseImage2>
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Please input related labs here.
name=NC_008398:532753..539325
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source=RiceChromosome05
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==References==
preset=GeneLocation
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Please input cited references here.
</gbrowseImage2>|
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CDNA = <cdnaseq>atggcccatgcccctcttccttcacttctgtgtctcaaggaacctatatatgatgttgttgctgaattggaactgctgataagtaagcagcaactcagcttgtacaactacagccccagcgatccgcagctgttttcccagccaaccacaggatcaagaacgtatttgtcaggtgcagtcaccatccctgggatttgcaatgacaaaagtaatcttggacaacaacaatttcagattgatgcagcgcttagtctagggtaccagaggatcagatcaagcgatgccctttgctacataagtcgggtgctgatggaggacgtcgatgagagggttgacctgcaccaaggggaggctgctcttcaggctgcagagaaacccttctatgatattcttggccaggtatatccaccatcgctaaaccggctagcactccatagcgcaaatgaaccagatacgcctgatgagagcagtagcagaaacaattatcataataggtaccatagtagccattccagtttcaacatgttacagcccttgccaaccccattgagtccatatagctatggcaggagtctttttcttccaaaccaacacttggtaagcactgcctggacttctacctttggcatccctggcttccaaattagaagaggtgccgaggaggcaaagagatttgttccaattattgataagttggtgatcgatttggacactgaccgggggctctccatttcaaaaatgaccacgaaggcaaaagtaggagacaagaaaagatatgcaatctttgagttgacagatcaaaggcacagcccttacaccacagacttggatatcttggaagggaggaacagcaaacgctatgccatcacttactgtgaaataatccggaatgatatgtttgacagggttctgctctgctatggtgtggagaatttcgccgaagcatcaaatcttcgaaaaataatgacgaagcaagcacgcaagaattcactgaatggacaaaccagaggatctgcacaacggaaattacggggtatgaaacaactcaagaaggatgtagttgatctcaggaatctcctcatccactgtgcacaagcagtagcagctgacgaccgcatttcggccagtgaactagtgaagaagataagacagcattcttcaccagatggagatagtaaccagaggttggcattttacttggtggatggtctggaggcgcgcttggctgggatcgggagccaggtgtatcgcaagctcatggcaagccgaaccagtgctgagagtttgttgaaggcttacagcctctacctttcagcttgccctttcgaaagggcgtcattcgcctatgcaaaccaaactattcttgatgcatcaaaggggcagcaaccaagaaaggtgcacattgttcatttcggcatttgcactggctttcagtggccatcattgattcagcggcttgcaaatgaagaagggggtccacccaagcttaggatcacaggtatagatatgccccagccaggtttccacccctgtgaaataattgaggagacagggaagcggttggctgattatgcaaacttgttcaaggtgccttttcaatatcagggcattgcttcacggtgggaaaccgtacaaattgaggacctgaacattgacaaggatgaagtgctcatagtcaactgtatgttcaggatgaagaatcttggtgatgagatggtatctatgaatagcgcaagggatagggtgctgaaaataatgaggatgatgaacccaagggtttttattctcggtattgtcaatggatcatacagctctcccttcttcatcacacgtttcaaagaggttctgttccattactcttcattgtttgacatgattgatgcaaatgttccacgggataacgaggcgaggaagatgatagaggggggactctttgggcaggaagcacttaacatcatagcatgcgagggtgcagaaaggactgagaggccagaaagttacaagcagtggcaagcacggtgcctcaaggctgggttcaagcagctccctgtcgatccagccaccttgaaagagataataaatatgaagaaagggatttaccatgaggactttgtagctgatgaagatggtgcctggctactacaaggatggaaagggagaaaaagtgtcaagaagaaggttacaagaaataaccctaatattaatcagccagatgtcaacaagaaaatcacaaatttctgcttcagaagcttaaagcaatgcaggtctagcataatggacagccctgagtattgtcagaccaactcaaacataactcttgattatataaacagaatattgatggaggaggatattgatgaaaagatcagcataaaaaaaggacaggatgcacttcaggcgacagagaagcccttctatgatattcttgggaaggcatacccatcttcatctaaggagacagcaattaacggtgacagtcaagcagattaccctgataatggtagcagcagttatcatgaacaggcatgtagtggtagctttgttagtgatctccttgggtcacaggatgcgcattcgataaccaccgactggtcttctgaatttgaccgtttggctttgcaattcaggagaggtgttgaggaagcaaagaggttcattccaaatattgaaaagttggtggatgatccagagaagaatggtctttatgcttgcaaacaaacaacagagacaacagaacagaagggcaagcatgagaacaaaataaggaatcatcctcatgatcctcatgttgagcacatagagttgatggaagcaaggaacagtaagcatatggccatctccactagtgaaacaatacgggatgaaatgtttgatagtattctgctctgcaataggcagctccctggtgaagttgctaaccttagaggaatgatggcaaaagaagcaagcgacaacccaaagaaatttcaaagcaaaggatatggaaaagggcaaaggaagccacacagtagtaagaagaaacagaaagaggcaatagatctcagtgttcttctcatccaatgtgcacaagcgatagcatctaacaaccatccctttgctagtgagctactgaggaaaataaggcatcacgctttgccagatggagatggttctcagaggctagcaaactgctttgcagatggcctcgaggctcgcttggctgggactgggagtcaaatgtacgaaaaactgatggcgaaacaaacgagcaccagagacatgctaaaggcctatcatctatattttgtagcatgcccttttgagatggtaacatactacttctccaacaaaaccatcattgatgcattggaggggaaaacaacattgcatatcgttgattttggcatcctcttcggctttcagtggccatgtctaattcagcgacttgcaaagcgagaaggtggcccccctaagcttcgtatcacaggtgtagatgtaccccagcctggttttcgccctcatgaaaggattgaggagactggaaagcggttggcagagtatgcaaatatgttcaacgtacctttccagtatcatggcattgcttcaagatgggaaactatctgcatcgaggatctcagtattgacaaggatgaggtactcataatcaactgcatgtcacgaatgagaaagctaggtgatgagacagaaaacattgatagtgcaagggatagggtactacacatgatgaagaggatgaacccgcaggttttcattcttggtgttgtgaatggattgtacagctccccattctttctgactagattcagagaggttttattccattactcatcactttttgatatgctcgacaacaatgttcctaggaaccatgaagcaaggatattggtagagaaggatctctttgggaatgatgcacttaatgctgtagcatgcgaaggtgcagaaaggattgagaggccagaaagctacaaacagtggcaaatgaggatcctcagggctgggttcaagcaacgtcctgttaatcaagccattctgaatagatcagtacattacaaggaattttatcatgaagactttgtaattgatgaagatagtggctggctgctgcagggatggaaggggaggataatacaggcactgtcaacatggaaagtggaaacctag</cdnaseq>|
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==Structured Information==
AA = <aaseq>MAHAPLPSLLCLKEPIYDVVAELELLISKQQLSLYNYSPSDPQL                    FSQPTTGSRTYLSGAVTIPGICNDKSNLGQQQFQIDAALSLGYQRIRSSDALCYISRV                    LMEDVDERVDLHQGEAALQAAEKPFYDILGQVYPPSLNRLALHSANEPDTPDESSSRN                    NYHNRYHSSHSSFNMLQPLPTPLSPYSYGRSLFLPNQHLVSTAWTSTFGIPGFQIRRG                    AEEAKRFVPIIDKLVIDLDTDRGLSISKMTTKAKVGDKKRYAIFELTDQRHSPYTTDL                    DILEGRNSKRYAITYCEIIRNDMFDRVLLCYGVENFAEASNLRKIMTKQARKNSLNGQ                    TRGSAQRKLRGMKQLKKDVVDLRNLLIHCAQAVAADDRISASELVKKIRQHSSPDGDS                    NQRLAFYLVDGLEARLAGIGSQVYRKLMASRTSAESLLKAYSLYLSACPFERASFAYA                    NQTILDASKGQQPRKVHIVHFGICTGFQWPSLIQRLANEEGGPPKLRITGIDMPQPGF                    HPCEIIEETGKRLADYANLFKVPFQYQGIASRWETVQIEDLNIDKDEVLIVNCMFRMK                    NLGDEMVSMNSARDRVLKIMRMMNPRVFILGIVNGSYSSPFFITRFKEVLFHYSSLFD                    MIDANVPRDNEARKMIEGGLFGQEALNIIACEGAERTERPESYKQWQARCLKAGFKQL                    PVDPATLKEIINMKKGIYHEDFVADEDGAWLLQGWKGRKSVKKKVTRNNPNINQPDVN                    KKITNFCFRSLKQCRSSIMDSPEYCQTNSNITLDYINRILMEEDIDEKISIKKGQDAL                    QATEKPFYDILGKAYPSSSKETAINGDSQADYPDNGSSSYHEQACSGSFVSDLLGSQD                    AHSITTDWSSEFDRLALQFRRGVEEAKRFIPNIEKLVDDPEKNGLYACKQTTETTEQK                    GKHENKIRNHPHDPHVEHIELMEARNSKHMAISTSETIRDEMFDSILLCNRQLPGEVA                    NLRGMMAKEASDNPKKFQSKGYGKGQRKPHSSKKKQKEAIDLSVLLIQCAQAIASNNH                    PFASELLRKIRHHALPDGDGSQRLANCFADGLEARLAGTGSQMYEKLMAKQTSTRDML                    KAYHLYFVACPFEMVTYYFSNKTIIDALEGKTTLHIVDFGILFGFQWPCLIQRLAKRE                    GGPPKLRITGVDVPQPGFRPHERIEETGKRLAEYANMFNVPFQYHGIASRWETICIED                    LSIDKDEVLIINCMSRMRKLGDETENIDSARDRVLHMMKRMNPQVFILGVVNGLYSSP                    FFLTRFREVLFHYSSLFDMLDNNVPRNHEARILVEKDLFGNDALNAVACEGAERIERP                    ESYKQWQMRILRAGFKQRPVNQAILNRSVHYKEFYHEDFVIDEDSGWLLQGWKGRIIQ                    ALSTWKVET</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
DNA = <dnaseqindica>4636..6573#3833..3898#682..2754#1..87#atggcccatgcccctcttccttcacttctgtgtctcaaggaacctatatatgatgttgttgctgaattggaactgctgataagtaaggtgcgtgtttgtctactttaactacttgcctgttttccataattagcagacaacaatgttcttgagctcttccatcaggagcctcctgcagttcaacattcagaatgttagaaacgagtacttcaggtgtactgttgtgtaatttatgcaacacaattcaatttgttactggagaccatagttttgcttgttttcatagaagttcacaccgaatcaattataagctgaatttccaaagaaaaaaagggtgaggaaataatgcgctaactggttgcggttccctcttataaacaaccttctatggtttggggatgcaaatgttctgaattctaccaaatgagtaggctgaacataattttgagtatccgtgatcatgaagaagaattcagaatctgtctcatgcaaaacttgcttcactttcccttttacagacaacaaactgaattcatttgctgtgggacaggatatatctgtcattcagttttcaggtggcaaaaaaaaaaaaaacaaatggtgattgagcttccctttgacaatcaatacaccaccacagaaacagaacagccacatgatgggtcttcctgttcttcccagcagcaactcagcttgtacaactacagccccagcgatccgcagctgttttcccagccaaccacaggatcaagaacgtatttgtcaggtgcagtcaccatccctgggatttgcaatgacaaaagtaatcttggacaacaacaatttcagattgatgcagcgcttagtctagggtaccagaggatcagatcaagcgatgccctttgctacataagtcgggtgctgatggaggacgtcgatgagagggttgacctgcaccaaggggaggctgctcttcaggctgcagagaaacccttctatgatattcttggccaggtatatccaccatcgctaaaccggctagcactccatagcgcaaatgaaccagatacgcctgatgagagcagtagcagaaacaattatcataataggtaccatagtagccattccagtttcaacatgttacagcccttgccaaccccattgagtccatatagctatggcaggagtctttttcttccaaaccaacacttggtaagcactgcctggacttctacctttggcatccctggcttccaaattagaagaggtgccgaggaggcaaagagatttgttccaattattgataagttggtgatcgatttggacactgaccgggggctctccatttcaaaaatgaccacgaaggcaaaagtaggagacaagaaaagatatgcaatctttgagttgacagatcaaaggcacagcccttacaccacagacttggatatcttggaagggaggaacagcaaacgctatgccatcacttactgtgaaataatccggaatgatatgtttgacagggttctgctctgctatggtgtggagaatttcgccgaagcatcaaatcttcgaaaaataatgacgaagcaagcacgcaagaattcactgaatggacaaaccagaggatctgcacaacggaaattacggggtatgaaacaactcaagaaggatgtagttgatctcaggaatctcctcatccactgtgcacaagcagtagcagctgacgaccgcatttcggccagtgaactagtgaagaagataagacagcattcttcaccagatggagatagtaaccagaggttggcattttacttggtggatggtctggaggcgcgcttggctgggatcgggagccaggtgtatcgcaagctcatggcaagccgaaccagtgctgagagtttgttgaaggcttacagcctctacctttcagcttgccctttcgaaagggcgtcattcgcctatgcaaaccaaactattcttgatgcatcaaaggggcagcaaccaagaaaggtgcacattgttcatttcggcatttgcactggctttcagtggccatcattgattcagcggcttgcaaatgaagaagggggtccacccaagcttaggatcacaggtatagatatgccccagccaggtttccacccctgtgaaataattgaggagacagggaagcggttggctgattatgcaaacttgttcaaggtgccttttcaatatcagggcattgcttcacggtgggaaaccgtacaaattgaggacctgaacattgacaaggatgaagtgctcatagtcaactgtatgttcaggatgaagaatcttggtgatgagatggtatctatgaatagcgcaagggatagggtgctgaaaataatgaggatgatgaacccaagggtttttattctcggtattgtcaatggatcatacagctctcccttcttcatcacacgtttcaaagaggttctgttccattactcttcattgtttgacatgattgatgcaaatgttccacgggataacgaggcgaggaagatgatagaggggggactctttgggcaggaagcacttaacatcatagcatgcgagggtgcagaaaggactgagaggccagaaagttacaagcagtggcaagcacggtgcctcaaggctgggttcaagcagctccctgtcgatccagccaccttgaaagagataataaatatgaagaaagggatttaccatgaggactttgtagctgatgaagatggtgcctggctactacaaggatggaaagggagagtaatttatgccatatccacatggaagccaaatgaatcatatttggatcagtaagattcaaacagtttttcatgtacatatgctatggtgctcaaaggtgtataggcaactgccaatctctgtatctacttgaacagtcgtaaacacaataaatgaacatatatgtatcctttatatgtattgatttgattgtacatgagcatatatagaaactaaactaaacgaagtgtataacatactttttttatacctttgaaggaggtaccagtccttccatctcaacaatatgtactatttgaaagttcaaggttcctccctaaggaccatactaaaagtcttcttgttttatttcagaacaaagtgtaaatgtgtaatagaaaactactctagtagtgaaactgttgttttctaaaaccaatgtgtctatcccttgttctttcatgcataataggttgtaatagtgcaacatctaagtgcatgtgaatggggaagcaaaaataataattttaaatacctgagaaggagacaaaaaaagctgcaagcaatgaatagctggaatcatacagcttaaacaagagactgtttgtgctccagtgacatgcaattgttctttccatctattagcaaactatttggctggaaacaactacttcattgtataccagtaaattattcttggaagtacaatttctagattatattcataacttttagttctcatattctcatattttttttactcctaagttagattactgattgtattctaaatttccaatggccggttactgtttaacgtgggattagagtaaatagcacaatacgttaaatagttagacaataactttagaatttccagtttacttatcattttcctgggcacatgatgtccttttatcagttgtcacatccttctctttggttataattgggggcatctatgtgtccaaactgaaccaaaaggcccagcctggatgaatgacaatggtgcctagtttgtaacagaaatgatcacaagaaagccatttggaatatgatctgttaccttcatgtcacagttatatgttttataaatcagaaaagtgtcaagaagaaggttacaagaaataaccctaatattaatcagccagatgtcaacaagaaagtaacaagaaataaagaccaagaggaacattaaacaattttcacatcaacaagaaaagctcacccatcagcacaactaaggagcctcagcccctctcataaggactggacaatgccactactctcaatggctcaaaataaagtccccagtttttcacctccctccttcctcaccataggccagatacatcattaagctaggtaaatactgatgtaatctctcttgctgctgttaacaattggtaacagcagtaatagtagtatacatcataaaaagtatatttgggatatattctacagtgtagttggtataccaagttaccaactcctacattttgatacaccaacattttttctcaacaaaaggtgtcttccagagtttggaggttatccatgtcaaaagtatgatttacatagcaggtaagtagtgcatacaatcttcaaaattgggtgccagagatggttttacatgtcagtttatctaggcaaaaaactatgttttgctgattacagtcctgggaggtaccagtacctccgaattttaatgttttcattcatattggcaactcctgttgttaattagcgtggcacctctcaggaccataaaagaactcttgaacttatcctattatcctatctatgacttattttgatattttagcaagttttgagaggcaaaaaaaaaagacattggctggtaaagaaacccttctaaaaggttgacttgctcttttgtagatcacaaatttctgcttcagaagcttaaagcaatgcaggtctagcataatggacagccctgagtattgtcagaccaactcaaacataactcttgattatataaacagaatattgatggaggaggatattgatgaaaagatcagcataaaaaaaggacaggatgcacttcaggcgacagagaagcccttctatgatattcttgggaaggcatacccatcttcatctaaggagacagcaattaacggtgacagtcaagcagattaccctgataatggtagcagcagttatcatgaacaggcatgtagtggtagctttgttagtgatctccttgggtcacaggatgcgcattcgataaccaccgactggtcttctgaatttgaccgtttggctttgcaattcaggagaggtgttgaggaagcaaagaggttcattccaaatattgaaaagttggtggatgatccagagaagaatggtctttatgcttgcaaacaaacaacagagacaacagaacagaagggcaagcatgagaacaaaataaggaatcatcctcatgatcctcatgttgagcacatagagttgatggaagcaaggaacagtaagcatatggccatctccactagtgaaacaatacgggatgaaatgtttgatagtattctgctctgcaataggcagctccctggtgaagttgctaaccttagaggaatgatggcaaaagaagcaagcgacaacccaaagaaatttcaaagcaaaggatatggaaaagggcaaaggaagccacacagtagtaagaagaaacagaaagaggcaatagatctcagtgttcttctcatccaatgtgcacaagcgatagcatctaacaaccatccctttgctagtgagctactgaggaaaataaggcatcacgctttgccagatggagatggttctcagaggctagcaaactgctttgcagatggcctcgaggctcgcttggctgggactgggagtcaaatgtacgaaaaactgatggcgaaacaaacgagcaccagagacatgctaaaggcctatcatctatattttgtagcatgcccttttgagatggtaacatactacttctccaacaaaaccatcattgatgcattggaggggaaaacaacattgcatatcgttgattttggcatcctcttcggctttcagtggccatgtctaattcagcgacttgcaaagcgagaaggtggcccccctaagcttcgtatcacaggtgtagatgtaccccagcctggttttcgccctcatgaaaggattgaggagactggaaagcggttggcagagtatgcaaatatgttcaacgtacctttccagtatcatggcattgcttcaagatgggaaactatctgcatcgaggatctcagtattgacaaggatgaggtactcataatcaactgcatgtcacgaatgagaaagctaggtgatgagacagaaaacattgatagtgcaagggatagggtactacacatgatgaagaggatgaacccgcaggttttcattcttggtgttgtgaatggattgtacagctccccattctttctgactagattcagagaggttttattccattactcatcactttttgatatgctcgacaacaatgttcctaggaaccatgaagcaaggatattggtagagaaggatctctttgggaatgatgcacttaatgctgtagcatgcgaaggtgcagaaaggattgagaggccagaaagctacaaacagtggcaaatgaggatcctcagggctgggttcaagcaacgtcctgttaatcaagccattctgaatagatcagtacattacaaggaattttatcatgaagactttgtaattgatgaagatagtggctggctgctgcagggatggaaggggaggataatacaggcactgtcaacatggaaagtggaaacctag</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001187245.1 RefSeq:Os05g0110400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 5]]
 
[[Category:Chromosome 5]]
 

Latest revision as of 08:16, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information