Difference between revisions of "Os05g0292200"

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(Created page with "{{JaponicaGene| GeneName = Os05g0292200| Description = Similar to Transcription factor IIA large subunit (TFIIA-L1)| Version = NM_001061636.1 GI:115463002 GeneID:4338303| ...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os05g0292200|
 
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Description = Similar to Transcription factor IIA large subunit (TFIIA-L1)|
 
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Version = NM_001061636.1 GI:115463002 GeneID:4338303|
 
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Length = 6398 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0292200, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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Please input expression information here.
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AP = Chromosome 5:12843807..12850204|
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CDS = 12843945..12844064,12844175..12844363,12844492..12844659,12844740..12844794,12844918..12844976<br>,12846056..12846181,12848553..12848681,12848758..12848812,12848905..12849080<br>,12849175..12849258,12849874..12849897|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008398:12843807..12850204
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source=RiceChromosome05
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008398:12843807..12850204
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source=RiceChromosome05
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggccagcagcaacgtctccacggtctatatctccgtcatcgacgacgtcatctccaaggtccgcgacgacttcatctcgtacggcgtcggcgacgctgtcctcaacgagctccaggcgctctgggagatgaagatgctgcactgcggcgcaatctccgggaccatcgaccgctccaaggcggctcccgcgccgtccgcaggcacccccggcgctggaaccaccccgccggtacacgacctaaacgtgccctacgaggccacctcggaggagtacgccacccccacagcggacatgctgttccccccgacgccgctacaaaccccgatccagacccctcttccaggaacagatgcagggatgtacaacattcccactgggccttcagactatgccccttccccgatcagtgacgtgaggaatggcatggccatgaatggagctgatccaaagactggtcgcccgagtccctacatgcctccaccctctccctggatgactcagaggccgctgggcgttgatgtgaatgtcgcttatgtggagaaccgtgaggacccagataggaccggacagcctccgcaactaactaaggattttctaatgatgtcctctgggaaacgcaagagggatgaatatcctggtcagctcccttctggttcttttgtgccacaacaagatggaagtgcagatcagatagttgaatttgttgtctcaaaggacaacgcacaacaactttggagttccattgtgaacaagcaaggaacagcaacaaaagaatcttccacaaaggaaacaataattgctccaacgattcctcaacgggatgggatggatgactataatgatccattttacttccaaggagttccaactgaggattacaatacccctggagaatcgtcggaataccgagctcccacaccggctgttggaacaccaaaaccgagaaatgatgtaggcgatgatgatgagcctccgcttaatgaagatgacgatgatgatgatgagttagatgaccttgagcaaggggaggatgagcctaacacacagcaccttgtcctcgcacagtttgacaaagtgacaaggacaaagaaccgctggaaatgcactttgaaggatggaatcatgcatttaaatggccgagatgttctattcaacaaggctaccggcgaatttgatttttga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MASSNVSTVYISVIDDVISKVRDDFISYGVGDAVLNELQALWEM                    KMLHCGAISGTIDRSKAAPAPSAGTPGAGTTPPVHDLNVPYEATSEEYATPTADMLFP                    PTPLQTPIQTPLPGTDAGMYNIPTGPSDYAPSPISDVRNGMAMNGADPKTGRPSPYMP                    PPSPWMTQRPLGVDVNVAYVENREDPDRTGQPPQLTKDFLMMSSGKRKRDEYPGQLPS                    GSFVPQQDGSADQIVEFVVSKDNAQQLWSSIVNKQGTATKESSTKETIIAPTIPQRDG                    MDDYNDPFYFQGVPTEDYNTPGESSEYRAPTPAVGTPKPRNDVGDDDEPPLNEDDDDD                    DELDDLEQGEDEPNTQHLVLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKATGEF                    DF</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
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DNA = <dnaseqindica>139..258#369..557#686..853#934..988#1112..1170#2250..2375#4747..4875#4952..5006#5099..5274#5369..5452#6068..6091#gtccgcctccctcctcctcttccccccctcttcttccccaactcgccgccgtcctgcccgcctccaccctttcgcctcctcgttccccgcacccaaaccctaatcctagccgccgctgccgctgccgctgccgccgccatggccagcagcaacgtctccacggtctatatctccgtcatcgacgacgtcatctccaaggtccgcgacgacttcatctcgtacggcgtcggcgacgctgtcctcaacgagctccaggcggtaagcatcgccgattcctcgggtttccggccctagttgtgtctcgaattgctgcttggttggctcgatttgacggttggttctccgattcgggccccggaaaaccctagctctgggagatgaagatgctgcactgcggcgcaatctccgggaccatcgaccgctccaaggcggctcccgcgccgtccgcaggcacccccggcgctggaaccaccccgccggtacacgacctaaacgtgccctacgaggccacctcggaggagtacgccacccccacagcggacatgctgttccccccggtgaggaatccctcaaccgcccccgccccccgccccccccccccgcccccctctttcagattggtctcgatctctgcgaattgagtgattgacaggtagggtattgatgcggctgtatttggatgcagacgccgctacaaaccccgatccagacccctcttccaggaacagatgcagggatgtacaacattcccactgggccttcagactatgccccttccccgatcagtgacgtgaggaatggcatggccatgaatggagctgatccaaagactggtcgcccgagtccctacatggtagaatcaatttggttcttttgttgatttatttatgttgttccccctttggcttggaatttattattgttatgttgcagcctccaccctctccctggatgactcagaggccgctgggcgttgatgtgaatgtcggtatgtgcttatgttatgctcagtttttgttctcaggtctcaatattcgatcgcagttagactgattggagaaatattgactgggtaggagtaatgattttgccaactttgattcatgtgcagcttatgtggagaaccgtgaggacccagataggaccggacagcctccgcaactaactaaggtaaaaatgtccatgttatgttgaaactgaagtttgtttgctgttagcatttgtttttgttatttttggtaagaaatgccctgtgagaattaatcaaattgcaattgcacacaaagtgcaacttactaataactaatatgtagtaagtacttggattaatatttagtggcattccagtcatccagtgttcgaaattggagttgtcactcgctaatatgttttatatggtaaccaaattctagaaagattattacttggatctttggtttatattaccatatccttctgatgggtttacttggatctttggtttattaccatatacttctgatggattatttgggtagtgactagactatggtcaattctagcaatgagaaccgatacaattaaacattatgtgaccaataaatgccatcaatatgtttgtgctagtctttccttgactttctgacccctcttaatttggcatgttaccattacatgcatgaactcgctgcccatgcaagtaaagcatcccttttgaatgggtagtagggacatagtcatcaaatatattaaaggaacaatttccacctcttatagggtggtgatagacattttaaaataaagagggttccccatttttttaatgtattttcgctgtaatttcaggaattaaactgtttctcatgaaccatcattgaaaccgcgtttgtgtatatttttaagccagactacctgtccagtaacctaaccagtacagaaccaagcaccaattgcaactttgaaacattacttttgtatctctattaatacaaaagaagcagcagtggtaagtttaccatccctctgccactcgcatggagtttgtgggattttttttgaagtatcttcttcgaaatatttgtgcctttagaagtttagaacctgcatcatattgcttcaaaatccattgcattgcgcagctattggctgctttcattaagctcaaatttcccagcttgtcagcttctcactaatttgaccattagcttatttgaaatacttgattctactatagtagaatggattcatatttgatttatttcatattgtaggattttctaatgatgtcctctgggaaacgcaagagggatgaatatcctggtcagctcccttctggttcttttgtgccacaacaagatggaagtgcagatcagatagttgaatttgttgtctcaaaggtattattcattaatggaaagtgcaattcagtatcacaatttgtcttgcacttcaatctcataagtatgtgtggtagtgctccttagagttgtttaaggatgccactatagatttggtccctatctgatccttaggccttgttgaaaagggagggtttggatttgaatccttactcttcgatggttcatggaacccagtcaggttcaataattggagcaatgcaagtatatgtcaactagtatatgtcaagaatgtacgtggctatatagtttggtagattatagagcctttctctactcttatgaattcatcttctgttatatgtccataaaattgtttcaaaccgcctatttagtaccaaggtcttttgaattcttgatatggccaaatgtctgactctctgtagagtgttgatttttcattgttgcaatgccaagagatatccttgcatatgcacgagtggatggcaatttaaacatccaaaattcattaactgtcatgtcacatttctaacagtaactagtgggtttgcatgtggaacccatgtagccaagaaaatataacaagtaggatgtaaatatgagggggaacggtaggatgtgctgcatgtgcaccgggaggggtgagatgagttgagtggcgtcaggctgtcagtgggtgtctggttggtggttttgtgggctgggcagtatggcataattaacaggaagtataattagtggtgaaattctaattgaaatgaggataattgatgtataaattaatggttaggagggatgcatgcttttcatattggtttatataatacagctccaacacatgcgagggctctcagtttcttttgttgtacttgcatttttgtctgtcctatcacgttgatatactatattggagtatatttgtcatctaagtagatgtattgattgactagtttaaactgtctaaacctttatatgaatgatatgttgtactctatggcatgcatatatataatgttggctgtattacatgaataacatccacatatgttttaaacagtctgtagcaaaagcataccaacatacttgttttatagtggatagcagaaactatttgctgagctacagaacatgtacaatatttcaatcttaaactaacatccccatcgtaaatgcacataatttccttattatgaaatatcacaatttttttgttccttttcttgttctgttgagttgtactgttccatgtcatcttttaattgccatgatagataaccaatacaacctgataccaaactcaccacgagaataggaaattgaactgaaaacagtattggaaatgttcactcagtgaagcgcgtacaagtatcacagcacataaatattgatcgattcattttttgttcctgaacctaagaactatcattttccatgcatgtgcttccgtccatatgtggttaaaactggcagggcatgtcatggcatgttaaagaaaaaatgttttaggcaaaccgtttaacccagcaataattgaggttgtatgaaaatcatacatgcatcagcttatccccagctgaaaatggactgatgctggttttcatacttgggttaactgcttatgatcaccactagtgtatatcttgtgtggtggcctgctgtaatggagatatactagcattatacatgagcagtgctaatcgtatatggtagcatttgtgtgaagaattgtcctggtagaaatgaaattacttggactaattttactgaacatttcactgggtgataggtagcttgatgtatttaagtggtgatggtgtattggtttttggaagtacttcccagactaagaaaatcatactttgtaaccgagtagttagctagtatagtattaggtttgtgataactgaatcaatgaggcaattaggatccacagatggaattttctaaaagaatttgagaaatctaatggtaattttctaagccaacgcagtagaattttttactttatgtgcacactggagaactctttatgtatgaattcttgagcttgcttaatactggcttgaactcaagagttcgttgtgttagtaggataattgaacttcatgtttctcttctttgtaaatatttggacacttttgagcaaaatttatgaaagttttctgtatggaaatgaggatatattgaatatatgcagtaaattgcaattcaatttatcatatcttcaattcatgatgcattcttattcttgtcctgtagttctcatcctgctcatgttctgttttaccatatactgttaacaagtgcttaattagataatttaaaccaagcttctaatattaccattttgtgtgaggaatcctcattctccttttggtcctttttttaggacaacgcacaacaactttggagttccattgtgaacaagcaaggaacagcaacaaaagaatcttccacaaaggaaacaataattgctccaacgattcctcaacgggatgggatggatgactataatgatgtatatttcgaattcatcaatggttttttcttatatttttgaattttcgcgactaactgggctgtgtctatttcagccattttacttccaaggagttccaactgaggattacaatacccctggagaatcgtgtaagtttctcatgaaaccatggaatttgatcttgtttgagagattagtgtccatgttgctgattttacacatgttttaatttgttccttagcggaataccgagctcccacaccggctgttggaacaccaaaaccgagaaatgatgtaggcgatgatgatgagcctccgcttaatgaagatgacgatgatgatgatgagttagatgaccttgagcaaggggaggatgagcctaacacacagcaccttgtcctcgcacagtttgacaaagtagtgatgcttccttttgtttaataatattgaagtcgattaggttttcctctatttagtgtgtcatgctttatctattcgctggtttatacaggtgacaaggacaaagaaccgctggaaatgcactttgaaggatggaatcatgcatttaaatggccgagatgttctattcaacaaggtagtcaacatgatcttttaatctactttgatatggtggaacaatttggtattcatggaagcatatttatttatttatttttataggatacatgccttgctgtctgtactcatgaatttaatttctagttattttgccacataattgtagtaataaaagatggattgaaaatagtgcatcaaacaaagcttaggtgaagaaactgaggcttatatttttctttttgataatagtgcatgaactcttattttatgttcatgatgaaactccgaagtcttttttgcatgatgtactctgtatacaccgtgtagttgcttttgcacttatccttccctggtgcttgtgtcaacatgatgaaaactattttccttgtaatttgaaagaatctgatgcttgaattggttgtagaatcatatagctaactgttcacataatgatcaatattcataattcctgctcaattagtttcaaccttttgtcggtttgttagcttgattattttcttgcattgccctaaacaaaattatgtcagactgactacatactaatgcttggtaggcactttacttggtgctccaacaattgacatgcatgttacacattatcttgttgcaggctaccggcgaatttgatttttgaattttgtgacaaagaggagctattttagaagctgctgtatcgacatatctttgtctttgacataagagtggggaatgacaaaagcactggtggggggtgggtttgttcctgtggaggctttgctctacccagtgggtttgttaccgtaactgttatcgctgtaaaaaaaaatgctacagttgggactgttgtagacattttcctgagatggttatcttaaagttggcggaggattaccttgtctgatttgtgttatctgtttcaatttctgtaagatggtttaaagaagtaaattttctgttaccgc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061636.1 RefSeq:Os05g0292200]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 5]]
 
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[[Category:Chromosome 5]]
 

Latest revision as of 08:24, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information