Difference between revisions of "Os05g0408200"

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==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
GeneName = Os05g0408200|
 
Description = SBP domain containing protein|
 
Version = NM_001062057.1 GI:115463844 GeneID:4338766|
 
Length = 9167 bp|
 
Definition = Oryza sativa Japonica Group Os05g0408200, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
 
AP = Chromosome 5:19929980..19939146|
 
CDS = 19930214..19930863,19932361..19932533,19932967..19933220,19933323..19933397,19933489..19933596<br>,19933972..19934089,19934405..19934540,19936681..19936855,19937391..19937918<br>,19938682..19938993|
 
GCID = <gbrowseImage1>
 
name=NC_008398:19929980..19939146
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008398:19929980..19939146
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggacgcccccggcggcggcggcggcggcggcggcggcggaggtggggtggatgccggcgagcccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtcctcccgtggggggacgattcgattgggatcgaggccgatcccgccgaggcggcgctgctcccccctgccccgtcgccgcagccggcggaggcggaggcggaggccgcggggccggcgtcgctgccgtcgtctatgcaggcggagggaagcaagcggcgcgtgaggaagcgcgacccgcggctggtttgcccgaactacctcgccgggagggtgccgtgcgcgtgccccgagattgacgagatggcggccgccttggaggtcgaggacgtggccacagagttgctggcaggggcgcggaagaagccgaagggtgccggccgtggtagtggtgcggcagtcggcggaagtggtggaggggctagccgtgggacaccggccgagatgaagtgccaggtgcctggttgtgaggcggacatacgtgagctgaagggataccaccgccggcacagggtgtgtttgcgctgcgcgcacgccgccgctgtcatgcttgatggtgtccagaagcgctattgccagcagtgtggcaagtttcatatattactagatttcgatgaagataaaaggagttgtagaaggaaattggagcggcacaacaaaagaagacgaagaaaacctgattccaaaggcatattggagaaagatatagatgaccagttggatttttcagcagatggtagtggtgatggtgaactaagagaagagaacatagatgtcactaccagtgagacgcttgagactgttctgagcaataaggttttggacagggaaacacctgtgggttccgatgatgtgcttagttctccaacatgtgcacaacccagtttgcaaatcgaccaaagtaaaagcttagtgactttcgctgcttctgttgaagcctgccttggcactaaacaggaaaacaccaaacttaccaattctcctgtgcatgacacaaagagtacttactcatcctcgtgtcccacaggacgtgtatcattcaagttgtacgattggaatcctgctgaatttcctcgacgcttacgccaccaaatatttgagtggctttctagcatgcctgttgaactggagggctatattcgtcctggttgtacaattttaactgtatttgttgcaatgccacaacatatgtgggacaagttatccgaagacacaggaaatcttgtcaaaagcttggtaaatgctccaaatagtctcctgttgggtaaaggggccttctttatccatgtcaataatatgatatttcaagtattgaaagatggtgcaacattgaccagtaccagattagaggtacagtccccgaggattcactatgttcatccatcatggtttgaagcaggaaagcccatcgatcttattctttgtggaagttctcttgatcagcctaaattcaggtcacttgtgtcatttgatggactgtacttgaagcatgattgtcgccgtatactgtcacatgagacctttgattgtattggaagtggggaacatatacttgattctcaacatgaaatattccggataaatattaccacatcaaagctggatactcatggacccgcatttgtggaagtggaaaacatgtttgggctatcaaattttgttcctatccttgttggtagcaagcatttatgttctgaactagagcagatacatgatgctctgtgtggttcttcggacataagttctgatccttgtgagcttcgaggacttcgacagactgcaatgttgggattcctcatcgacattggatggctaataaggaagccatccatagatgaatttcaaaacctactgagtttagcaaatatccagagatggatatgcatgatgaaattcctgatacagaacgattttatcaatgttctggaaataatagtgaactcgttggacaacatcatagggtcagagcttctttctaacttggaaaagggtagactggaaaatcatgtaacagaatttcttgggtatgtaagcgaagctcgaaacattgttgataatagacctaaatatgacaagcagagacaggttgatacaagatgggcaggtgattatgctccaaaccagccaaagttgggcatttctgtgccacttgctgaaagtactggaaccagtggagaacatgatttgcactcaaccaatgcagcttctggagaggaggaaaatatgcctctagtgactaaagctctcccacacaggcaatgctgtcaccctgagactagtgctagatggcttaacgctgcctccattggtgcttttccaggtggtgccatgagaatgcgtcttgccaccactgtggtaattggtgctgtggtatgttttgcagcttgtgttgtccttttccacccacacagagtaggggtgcttgccgcgccagtaaagaggtacttgtctaggaactactcatcatag</cdnaseq>|
 
AA = <aaseq>MDAPGGGGGGGGGGGGVDAGEPVWDWGNLLDFAVHDDDSLVLPW                    GDDSIGIEADPAEAALLPPAPSPQPAEAEAEAAGPASLPSSMQAEGSKRRVRKRDPRL                    VCPNYLAGRVPCACPEIDEMAAALEVEDVATELLAGARKKPKGAGRGSGAAVGGSGGG                    ASRGTPAEMKCQVPGCEADIRELKGYHRRHRVCLRCAHAAAVMLDGVQKRYCQQCGKF                    HILLDFDEDKRSCRRKLERHNKRRRRKPDSKGILEKDIDDQLDFSADGSGDGELREEN                    IDVTTSETLETVLSNKVLDRETPVGSDDVLSSPTCAQPSLQIDQSKSLVTFAASVEAC                    LGTKQENTKLTNSPVHDTKSTYSSSCPTGRVSFKLYDWNPAEFPRRLRHQIFEWLSSM                    PVELEGYIRPGCTILTVFVAMPQHMWDKLSEDTGNLVKSLVNAPNSLLLGKGAFFIHV                    NNMIFQVLKDGATLTSTRLEVQSPRIHYVHPSWFEAGKPIDLILCGSSLDQPKFRSLV                    SFDGLYLKHDCRRILSHETFDCIGSGEHILDSQHEIFRINITTSKLDTHGPAFVEVEN                    MFGLSNFVPILVGSKHLCSELEQIHDALCGSSDISSDPCELRGLRQTAMLGFLIDIGW                    LIRKPSIDEFQNLLSLANIQRWICMMKFLIQNDFINVLEIIVNSLDNIIGSELLSNLE                    KGRLENHVTEFLGYVSEARNIVDNRPKYDKQRQVDTRWAGDYAPNQPKLGISVPLAES                    TGTSGEHDLHSTNAASGEEENMPLVTKALPHRQCCHPETSARWLNAASIGAFPGGAMR                    MRLATTVVIGAVVCFAACVVLFHPHRVGVLAAPVKRYLSRNYSS</aaseq>|
 
DNA = <dnaseqindica>235..884#2382..2554#2988..3241#3344..3418#3510..3617#3993..4110#4426..4561#6702..6876#7412..7939#8703..9014#gtcctagtcatcggacgccgcccacctacccgactacccgaggcagcctctctctcctccctcgcccaccaccacacgacacgagacgagaagactgattcattcgctcgcgtacacgcctaggcgctccgagaattcgtgagggaatcccgcatcgccggagccgatcggcggcgccgcgggcgggtggggggggggggttagggttagggttttgggggtggcccaccggggatggacgcccccggcggcggcggcggcggcggcggcggcggaggtggggtggatgccggcgagcccgtctgggactgggggaacctcctcgacttcgccgtccatgacgacgactcgctggtcctcccgtggggggacgattcgattgggatcgaggccgatcccgccgaggcggcgctgctcccccctgccccgtcgccgcagccggcggaggcggaggcggaggccgcggggccggcgtcgctgccgtcgtctatgcaggcggagggaagcaagcggcgcgtgaggaagcgcgacccgcggctggtttgcccgaactacctcgccgggagggtgccgtgcgcgtgccccgagattgacgagatggcggccgccttggaggtcgaggacgtggccacagagttgctggcaggggcgcggaagaagccgaagggtgccggccgtggtagtggtgcggcagtcggcggaagtggtggaggggctagccgtgggacaccggccgagatgaagtgccaggtgcctggttgtgaggcggacatacgtgagctgaagggataccaccgccggcacagggtgtgtttgcgctgcgcgcacgccgccgctgtcatgcttgatggtgtccagaagcgctattgccagcagtgtggcaagtaaggctccatttcctcattccaggctgctttatgaacttgtggaagatccattgggatcagtagcagtaggagggataattaagtgctttaacacttatacaatcattgttgctatatgatttggtgtttaatgcattataccttttctagaatatagtggctgttggatatgatatttggtcatttcatagaaaaaaaaacatttacacactcgagagtctaagtggagtgtttgctcaaattatgcatgacgattcatttaattaatttattctgagaatggttctttaggattggactgttctcaacatgtctttgtagcaatggtatctgatcgtccgattaaccgcgatcaatcatcctgaccggtcctctgacttctgatcagggacattaactcaatcagctcaatcagaatctgatgataaatcagcgattcatcatccgattatgctaggtaacaattaatttcagtaggagttttgggctgcatgcgaagttgggcctcagcagtattgtgccggcccattcccatagggtttaccggtttagtcccctagaagctgtcacaaataaaaactaacaagtaagcaaccatctaaccatcaaatatttcctttatgattgcttatactatgcactatatatacattatcgattagcctcgattaattggcctgattgacctgatcggtgccttggcgatcagggtcgatcagacgatcagataacattgctttgtagttttaactatattgaaatctaccaactttacattttcttagaatttttcgtttcctctgctaggctatattatgtggtgtacataatttgctgtatgactgtattaatatagttttgttcaattgagaagatgggttttctattttgtactttttcttgaggtaccaattacgggttgcttaactggtttttttctggggggtggggggtcaaaatattcaggtggagccttatgattggttggagctaacatataaatttacactagttccatttccatgcagaatcagtttgttactgatggatggtcgctaaactttctaaaaattgcatgccaagctcatttgcaataaagctaagtcttttatttccaaatcaaattcatatttaaagtttgattaatctcataaactaaggaacatcctgctttaatgcataaattttcttgtatgtttttgacatgacgtaaggtcactgatcaaacaaactgcaagcatggaagtacctctgtccttgtgcatctgtccacaacctgttggccacttgatatatttttgaaacattactttagcaattgttcaaaattctttgcctagctcgaggtactaacctaaacctctttgctgttgactatggttgtggcgatctaacagctgtcctgggctcctggctgtatatattgtttttctactagcagtttaatttttgtgtgctaacactattctctctcttaatatatttctgctgcaggtttcatatattactagatttcgatgaagataaaaggagttgtagaaggaaattggagcggcacaacaaaagaagacgaagaaaacctgattccaaaggcatattggagaaagatatagatgaccagttggatttttcagcagatggtagtggtgatggtgaactaagagaaggtagatatttcaaagaaaaccgcctttattttttaatatgtttgctctgttataagtttttctatttgaagttgaacacaaaaggttttagtgatgtatttagaccaactatgagtggtaaatttgacttggctgtttccagagcattttacgaaagaggtgctctggatattttttttgcctagcaaatatggcattcattgttttgatataacttcattggcaaggtttcatggaatatttgggatcatgagttctctgtttgtgatacctactcaaccgagcaaacccttgatctgatccagatacataattgactcttaacaagatgagcctgtttacttctgttgtctatgcattttctccagacatgctggaagttctctgctgtctagtctggaacatatttgttaaccaatcatttctttaacagagaacatagatgtcactaccagtgagacgcttgagactgttctgagcaataaggttttggacagggaaacacctgtgggttccgatgatgtgcttagttctccaacatgtgcacaacccagtttgcaaatcgaccaaagtaaaagcttagtgactttcgctgcttctgttgaagcctgccttggcactaaacaggaaaacaccaaacttaccaattctcctgtgcatgacacaaagagtacttactcatcctcggtaagcgcttctccttgtgtacatattattctgtaatatataattattttctgttcttgctctctctaaaggttattagtaatgttgtatcatccattgtagtgtcccacaggacgtgtatcattcaagttgtacgattggaatcctgctgaatttcctcgacgcttacgccaccaagtatataaccaggctctaagtttctcaatagcacgctgttttcatgcccaaaagattgttctgaactcaatgccatacgtaaaatatgcagatatttgagtggctttctagcatgcctgttgaactggagggctatattcgtcctggttgtacaattttaactgtatttgttgcaatgccacaacatatgtgggacaaggtatggatgcttgtactaaaatgccaaatcattacttagtccaaaggaggacatttttttggatgcatccaaatgaagacctaccaaatattggtctttcaattccatgtccatgttttacagttcaaacaattttgagctgctaatttttataccacatccagttcaaaatatatatctctatggtatgcaaatgtatttttaccacttatgaacaattacatagttgtggagtgtaatgagtgcccacttgtggcatgtaaagtgtaattagaatttcccacaaagtgaactgaatggacttgttgtatggaagtcaataatactattttttttcttttacaagatagcatttatatctgcatttctttacagttatccgaagacacaggaaatcttgtcaaaagcttggtaaatgctccaaatagtctcctgttgggtaaaggggccttctttatccatgtcaataatatgatatttcaagtattgaaaggtgtgtaccacatgtcctgtttttccatgacgtgataacaacataaccttcttgtttatacatcatatatttgtacttaagctgcattgttcctgcataagagacactatacagtagattgataccaatcatagcctcactactacaattactatctgcagtttcagtatcacttgcaaaatcaatattagttgcatacgctaaattcgatgcataattttgaacttgtatcatttaattgctagcttattatatcttttgtttttatgagataattaccttacctgattgagaatattaactgctgtacttcagatggtgcaacattgaccagtaccagattagaggtacagtccccgaggattcactatgttcatccatcatggtttgaagcaggaaagcccatcgatcttattctttgtggaagttctcttgatcagcctaaattcaggtatgacagttccttgtaccttctacctgtttctgctggttattcttctgtcaggatacattatgttcagtttagctatggtgatatattcatatcattacctgagagatactatatctcaacgcagatcctgtaggaataagtcttggtcttggtcttgtggtgctttttcttgctttttagctctaggacagcatctctactttcagtttggatgctctaggacagctaggacagcagtttgttgagatgctctaggacagtttgttgggatgctctaggacagcacccacttgccctagcatggctgctacaagcagctataaatatgtatccaatcctctttgggaggatatggcttttgagtttgtgaatgaagaaaaccagaaaattgccccactctgagtgccatcctcttctcaatgagagtaaccattgaaattcgaacagaaccttgatgccacctttccattgtctatgaaatggagttcaaccattaaattttattgcaaatattttatagaagctaatatgaataaaaaaggttgcccatggtgacaatagtttcttactatagagggggagtagtgaatttttggaaaggtgttgattcaggaggtgttctttatttgtctatctgtgcatgcttgattttgatgtttttaacaatacaagcaagtggggagggggaaaggatgattaaaaccattctttagatgcccttggttgcgttgtaactctctcagtgatagaatgcccttggttgcgttgtaactctctcagtgatggctacaatcgtatttttgcctattccctcagcttggagaaataactaaatgaatatgagtgcaatgtgatatccagtacgcaatttatttcattttttgatcatgttccatgcacaaacttgctaggcgtcagtggttactgcatgaaatagaagtagtggctaaccaatgataacatgaaaccgcattagtggatcaggaagattttagtatggtcatactctgtgtgttaacttctattttatggattgtattttgagtaaagtccatcactggtccctacacttgtaccgttgtgtcattccggtccctaaactcgcaaatcgatcgttcaggtcctcaaacttgttcgactgtgtcataccggtccctaaacttgtagatcacttgtttaggtcctatccaacttgttcagttgtgtcaccccggtccctaaacttggatttgaatatcatcttggtcaaataggacggtctaaagactttatatttaaaaataattcataactttttcatgtgaactctaatgaagacaaactttatatcaaacttgtagccctcgacgcgatctacaactttgtagttgatttcgtgatctacaactttgtagttgatttttttttattttaagtcactttttgtcccaaaatgtaattttaaaattaaaatttcaaaatctataaacatgcaacaatattttgggacactaaacagttttaattcaaaaaattttcaactacaaagttgtaggtcgcgtcgagggctacaattttcatataaagtttgtcttcattagagttcacatgaaaaatttatgaattattttttgatgtaaagtttttagaccgtcctgtttagggaccagagtgacacaagtgaacaagtttgaggaccgtgatctgtaagtttacggaccgggatgacacagtcgaacaagtttgaggacctgaacagtcgatttgtgagtttagggaccgtgatgacacaacgttacaagtttagggaccggtgatagactttactcttgtatttttcccatttataacttaattgcgccatgacagccatggttcatgggtatttgtttaagtatccagaaattgaatccacacagagatctctcgcttgtgtggattatgctgcagttgcaacaatggctgtggctgcagctacagtacaagcagcacagattatgctgcagttgcggcaatctcttcccaacatccccatagtctataaccttattcttgtagacaagttctttcttagccggcagctgtctatgctcttgctaggtgttttgaatgccttacaggtgttttgagtacctctgaatatttgtaatcatggcaggtcacttgtgtcatttgatggactgtacttgaagcatgattgtcgccgtatactgtcacatgagacctttgattgtattggaagtggggaacatatacttgattctcaacatgaaatattccggataaatattaccacatcaaagctggatactcatggacccgcatttgtggaagtaagtatctgttacctttgactaaaccggtaaaattctctttcagggtctgcatattaatttacaccttttttttctctattgacaccaatttagcttgcacacaattggcttcaatgctttctattgtctagggcacgtagtgattagtgtgcttaagtttgtgtaatgctctgtacagtattggttcttggccacttcacaaaattgattgagatctttttaggcagcttaagtgtgaaccatctgaaatagtgtgttattttagtagaatctagaatgaacaatcaatgcacataagcaatcatttgctctgtgcactgtaatgtagaatgtgaacttgccaaatgttctgcaaacatatgatttgtatgcaattagccaaaaaaggtgttcgtgcaaaaaggacaaaaaatattttcaaaatatgaccaaatagttgacagaccacacttatttttgaaatcaagttgtcaccctttgacatttctgtagttctatatgatgaccgcagttctatgattttattttgcaggtggaaaacatgtttgggctatcaaattttgttcctatccttgttggtagcaagcatttatgttctgaactagagcagatacatgatgctctgtgtggttcttcggacataagttctgatccttgtgagcttcgaggacttcgacagactgcaatgttgggattcctcatcgacattggatggctaataaggaagccatccatagatgaatttcaaaacctactgagtttagcaaatatccagagatggatatgcatgatgaaattcctgatacagaacgattttatcaatgttctggaaataatagtgaactcgttggacaacatcatagggtcagagcttctttctaacttggaaaagggtagactggaaaatcatgtaacagaatttcttgggtatgtaagcgaagctcgaaacattgttgataatagacctaaatatgacaagcagagacaggttgatacaagatgggcaggtgattatgctccaaaccagccaaagttgggcatttctgtgccacttgctgaagtaagtgatcgtgttacacgctaattatcaatgacaatgaaagtgacactattcttcatattgctctcagccttttctaattgacatatataaattaatagaactagaaaacctagcttcatgctctagtaaaaaagttgtcaggatgatatttggcttgaaactggcattccacacatgcaagtccgtgtacaaaatatgtatgtctctgagtttttgtttgctagagttattagttattatatgccctttttattgtgaagtttctttttctactggttcatatttggtaatggaccttgcaaaaaaaatctggtaaaggaaaaagctatactacaaataaataattcgttacattttttttacaaaccctgatgtggcacgctattattgaatcttgattttataacttccaactaattaaattgaaatatcgagaactttgttagtaagaatttattagtatgtatagcactacttttcgccataatttattagtatgtatccacaattcatccgatcgttagcatctctcgtttgattcaagatcttaatcctgattacttttgagttcggattagctttttttcactgttgattgaatcctgggagttgtatgggagggaccctggctttatgaagtgttaaaacgacataacaacattagtgttgcatttacactttatttgttttctttttgtatcgcatacttttgtctccttatgtctggcagactactgaagtgtttggaacctttctgcagagtactggaaccagtggagaacatgatttgcactcaaccaatgcagcttctggagaggaggaaaatatgcctctagtgactaaagctctcccacacaggcaatgctgtcaccctgagactagtgctagatggcttaacgctgcctccattggtgcttttccaggtggtgccatgagaatgcgtcttgccaccactgtggtaattggtgctgtggtatgttttgcagcttgtgttgtccttttccacccacacagagtaggggtgcttgccgcgccagtaaagaggtacttgtctaggaactactcatcatagttgaagctagattagattaaccttcctgttgcttttcccctgtatcatatgcatgtacctttctaatttgaggcttagcttgtgcatccgatgttcaaatatttgtaagaggacccacaggcataaatgcaaatttttgcagctttttttggc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062057.1 RefSeq:Os05g0408200]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 5]]
 
[[Category:Chromosome 5]]
 

Latest revision as of 08:29, 14 May 2015

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