Difference between revisions of "Os05g0495600"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
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GeneName = Os05g0495600|
 
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Description = Similar to Calcium-transporting ATPase 4, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)|
 
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Version = NM_001062467.2 GI:297604691 GeneID:4339199|
 
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Length = 6812 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0495600, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
 
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AP = Chromosome 5:24394365..24401176|
 
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CDS = 24394365..24394559,24396544..24396598,24396681..24398611,24398686..24398844,24399213..24399384<br>,24399893..24400191,24400871..24401176|
 
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GCID = <gbrowseImage1>
 
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name=NC_008398:24394365..24401176
 
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source=RiceChromosome05
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008398:24394365..24401176
 
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source=RiceChromosome05
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggagggcgggagaagctggagcatcgagagctacctcaacgagtacttcgacatccccgccaagaaccctcccggcgaggcgcgccgccgatggcgccgcgccgtcggcctcatcgtccgcaaccgccgccgccgcttcggcaggttctccgacgtcgacgccatcgacgaagcccagcgccgcaagatcctgggaaaagttcaggttgtaattaacgtgcacaaggcagcgctgcaatttattgatggtgtaaaacaatatcatctacctcctgaacttattgaagaaggattctgtatcagcccagatgaactagcagcaattgctaacatgcgtgaagattatacaatgctcaggatgcatggtggaatcaatggaatatctagaaaaatcaaagcatcattggaagatggtgccaaggaaacagatatagcaaccagacagatgctgtatggagctaacaggcacgctgagaagccccctagaagcttctggatgtttgtgtgggatgcattgcatgacttgacactgattattctagtggtatgtgctctggtttctatagtggtcggccttgccaccaagggatggccgatgggtatttatgatggttttggcataatactcagcattttgttggtggtactagttactgcaaccagtgattaccaacaagctcggaagtttatggaactggaccgtgagaagcaaaaaatatatatccgtgtaactagagataagaaaacaaaggaggttttagttcatgacttggttgtcggagacatcttgcatctttctataggcgatgtggttcctgcagatggtctgtttatatctggtgactgcctaatgatagatgaatcaagtttgtctggtgagagtgagccagttaatatttctgaagagaggccttttcttcatgctgggaataaagtagtagatggggcagctaagatgcttgttactgccgttggtacgcgtactgagtggggcaaaatcatgggtactctgaatggagatggtgtggatgaaactcctttgcaagttaagcttaatggtgtggctacaataattggccagattggattggtgtttgctgtgctaacatttttggtacttctagcgaggttcttggctgacaagggaatgcatgttggtttgttaaattggtctgcaaatgatgcattgacaatagtcaactacttcgctattgcagtcacaatcattgttgtcgcagtccctgagggtctaccattggctgtgactcttagtctggcatttgctatgaagaagttgatgcatgacaaagcactagttaggcatctcgccgcatgtgaaaccatgggttcagcaagttgcatttgcactgataagacagggactttgaccacgaaccacatgattgttgataaggtttggattggtgatgtcaagtttgttggggacaaaaaaaattctgagctaaaaagcacgatttcagaaagagttatggcgatccttatacaaggcatatttgtgaatactgcgtctgaagtggtgaagggagacgatggaaaaaataccatcttaggcttggctactgaaacggcattattggagtttggcttgagcttggaagaacatttatatgatgactacaataagttgactagaataaaagtagatccttttaattcagttaagaaaaagatgtctgtgacaatacaattacctaatggaggcatcaggaccttctgcaaaggtgcgtcagaaattattctggaacagtgcaataccatccacaatactgatggaaatatagtaccgctgtcagaaatgcagaagcataatgtattaaatataatcaattcgtttgcttctgaggcattgagaacactttgcatcgcatttaaggatatggatgaatttcccaatgatcaacctatatcagatgatggttacacactaatagcagtttttggtataaaggatccagtccgtcctggtgtcaaggatgcagtaaggacctgcatggctgctggtattagagtaagaatggtgacgggagacaacatcaacactgctaaagctattgccaaggaatgtggaatattaacggaggatggaatagcaatagaaggacaacagcttaacaataagagctcagatgaactgaaggaactcctaccaaaaattcaggtaatagctcgctccttgcctatggacaaatacaaattggtgacaagcctgaaaagtatgtatcaagaggttgttgcggtgactggtgatggaaccaatgatgccccagcactgcacgagtcagatattggactagcaatgggtatcactggaactgaggttgcaaaagagagcgctgatgttataataatggatgacaatttcgaaaccattgtaaatgttgctagatggggccgtgcagtttacttaaacatccagaagtttgtgcagttccagcttacagttaatattgtggctctgattgtgaattttgtctcagcgtgcatcatagggagtgcaccacttactgctgttcagttgctatgggtgaacatgattatggatacgttgggagccttggccttagccacagaaccaccaaatgacgaaatgatgaagaggccccctgttaggcgaggagataattttatcactcggattatgtggagaaatattcttggccaaggtttgtatcagctccttgtgctggctactctaatggttattggaaagaaactccttagtattgaaggtcctcaatctgataaaaccatcaatactctcatattcaactctttcgtcttttgccaggttttcaatgaaataaattgtagggagatggaaaagatcaatgtcctccaaggtatcttcagaaactggatctttgttggtatattgacagctactgtcatattccaagtgatcatagtagaatttcttggcacttttgcaaacactgtaccattgagcggggagctgtggctgctcagcgtcgtcattggctcaattagcatgatcatctctgttatcctcaagtgcattccagttgaatttaataagacaaatactaaaccccatggttatgagttgattcctgaaggcccagagattctatag</cdnaseq>|
 
−
AA = <aaseq>MEGGRSWSIESYLNEYFDIPAKNPPGEARRRWRRAVGLIVRNRR                    RRFGRFSDVDAIDEAQRRKILGKVQVVINVHKAALQFIDGVKQYHLPPELIEEGFCIS                    PDELAAIANMREDYTMLRMHGGINGISRKIKASLEDGAKETDIATRQMLYGANRHAEK                    PPRSFWMFVWDALHDLTLIILVVCALVSIVVGLATKGWPMGIYDGFGIILSILLVVLV                    TATSDYQQARKFMELDREKQKIYIRVTRDKKTKEVLVHDLVVGDILHLSIGDVVPADG                    LFISGDCLMIDESSLSGESEPVNISEERPFLHAGNKVVDGAAKMLVTAVGTRTEWGKI                    MGTLNGDGVDETPLQVKLNGVATIIGQIGLVFAVLTFLVLLARFLADKGMHVGLLNWS                    ANDALTIVNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMHDKALVRHLAACETMG                    SASCICTDKTGTLTTNHMIVDKVWIGDVKFVGDKKNSELKSTISERVMAILIQGIFVN                    TASEVVKGDDGKNTILGLATETALLEFGLSLEEHLYDDYNKLTRIKVDPFNSVKKKMS                    VTIQLPNGGIRTFCKGASEIILEQCNTIHNTDGNIVPLSEMQKHNVLNIINSFASEAL                    RTLCIAFKDMDEFPNDQPISDDGYTLIAVFGIKDPVRPGVKDAVRTCMAAGIRVRMVT                    GDNINTAKAIAKECGILTEDGIAIEGQQLNNKSSDELKELLPKIQVIARSLPMDKYKL                    VTSLKSMYQEVVAVTGDGTNDAPALHESDIGLAMGITGTEVAKESADVIIMDDNFETI                    VNVARWGRAVYLNIQKFVQFQLTVNIVALIVNFVSACIIGSAPLTAVQLLWVNMIMDT                    LGALALATEPPNDEMMKRPPVRRGDNFITRIMWRNILGQGLYQLLVLATLMVIGKKLL                    SIEGPQSDKTINTLIFNSFVFCQVFNEINCREMEKINVLQGIFRNWIFVGILTATVIF                    QVIIVEFLGTFANTVPLSGELWLLSVVIGSISMIISVILKCIPVEFNKTNTKPHGYEL                    IPEGPEIL</aaseq>|
 
−
DNA = <dnaseqindica>1..195#2180..2234#2317..4247#4322..4480#4849..5020#5529..5827#6507..6812#atggagggcgggagaagctggagcatcgagagctacctcaacgagtacttcgacatccccgccaagaaccctcccggcgaggcgcgccgccgatggcgccgcgccgtcggcctcatcgtccgcaaccgccgccgccgcttcggcaggttctccgacgtcgacgccatcgacgaagcccagcgccgcaagatcctggttcgtacgcagccccctctccccctcccccggcgggatcgccattcccccccccatccccgccgccgcggttgccccggcggccggcgagcgtggtagactgcaagtagagtcgtacggctcgtacgactgactgttcgtagcatatcgtgcgggtcgctttcgttgaagcgaggtacaaatttacctattctttctcgaattttgtaagtaattttttgggagaggtcagaactgtggctaacgaaattgctgcgaaatttcctcggattggtctcctatgtggatgcgcgctccccccccccccccccccccctcctgatgtggatgcgcgcgtctgcatcccccacaacttgtgcctcttgttgctggccatgacatccacaagatctctcaatctcacagcggattccacgccaaggttctgtcaaattcttgaagtccatgtcctatcatttgaactgcgctgtagccgggggctgcgattcaggaggcgttctttccacgtctcgcctcgttgaattgagttcttgaattaattgttctcgacctgttctggtcaaggttctcatgcgaccgtccggattgagaagaccacttccagcggaaggcaaatgaaataatggatacatgtgtgttcatacaacattacaactggaaaaagctacattgcattatctcaaccattatcataacatggtcaagttgtacattatcataacatggtcaagttgtacaaaagtatacagcaagataggatcttctaccctttttaacttaaagaagtcaagggggccccttaattgtccaaccatctcggatcatcggggcatctgacctgtaaaagtatcaactagggtattatcgtttatcgggatcaatgatccaccttcagtaggaatgtgacaggaacctttcttgggaggggcaaaatatttatgggtgaaatctttgccttcgggccggcaacgatgcctgtgggtgccgttttcctcttggggcgttgctgcataatctcatctctcccagttactttcttcaggtgaaaacgatgtcctgactccctggggcaggcggtggtaacgctttcggtgttgttcccttcttggaggcgtcgcttcgaagatctttcattcttgtttccgctatcgcggcatgtgttgtcatagacgcgcggtgtggttgttttttttctttccttactatagtttttcaggactatagacttgtatatttctcatgctttatcaatacatgaaactcacactgtcttgtgcaattcgttttaaaaaaatgatccaccttaattgtctggccaacttgaccatcgatttattaatccatccatcacatatttctcaagactaaccatccagcctattgtctaacatggacaaatcatcctgacaatgcaaattttagtatacatctcaattaaatcatacttcgatttatttttacttgaactcttattttggggaaacggattgtttacttcaacctgttattgggcttcaactgactagaattgagctagacaagtctaccgtgaatcattactagataaaggaaaaacaagcctaactgactattgctgcttctgcttttattactttttttggggggaatacgcaaggagcgcatctttgtattaaggagtaataaaagttatttacaggaaaaatacaaatgtggtgaaggggacaagatacaggaagggaaaaaacgaaggaaaataaaatctaatctcgcaaaaaacttctgcttttattactgaaatttatttttgaagtctcgtcaaattacatccacgagtgaaggccaaaaaaacaaggagtgtagttgtgtagatgatagtagtaattccttttgccatcaacggtccccttgagaacataaaattcatgtaggttattttattatttgatagcacaagtagattgtttttgttcttttcttagagatgcttctttttcttgtccagggaaaagttcaggttgtaattaacgtgcacaaggcagcgctgcaatttattgatggtgtggtctcaactaattatttctggtttctgctcttatcataatcacaatatgtcatttcaccttatatctaatgatgtaggtgtaaaacaatatcatctacctcctgaacttattgaagaaggattctgtatcagcccagatgaactagcagcaattgctaacatgcgtgaagattatacaatgctcaggatgcatggtggaatcaatggaatatctagaaaaatcaaagcatcattggaagatggtgccaaggaaacagatatagcaaccagacagatgctgtatggagctaacaggcacgctgagaagccccctagaagcttctggatgtttgtgtgggatgcattgcatgacttgacactgattattctagtggtatgtgctctggtttctatagtggtcggccttgccaccaagggatggccgatgggtatttatgatggttttggcataatactcagcattttgttggtggtactagttactgcaaccagtgattaccaacaagctcggaagtttatggaactggaccgtgagaagcaaaaaatatatatccgtgtaactagagataagaaaacaaaggaggttttagttcatgacttggttgtcggagacatcttgcatctttctataggcgatgtggttcctgcagatggtctgtttatatctggtgactgcctaatgatagatgaatcaagtttgtctggtgagagtgagccagttaatatttctgaagagaggccttttcttcatgctgggaataaagtagtagatggggcagctaagatgcttgttactgccgttggtacgcgtactgagtggggcaaaatcatgggtactctgaatggagatggtgtggatgaaactcctttgcaagttaagcttaatggtgtggctacaataattggccagattggattggtgtttgctgtgctaacatttttggtacttctagcgaggttcttggctgacaagggaatgcatgttggtttgttaaattggtctgcaaatgatgcattgacaatagtcaactacttcgctattgcagtcacaatcattgttgtcgcagtccctgagggtctaccattggctgtgactcttagtctggcatttgctatgaagaagttgatgcatgacaaagcactagttaggcatctcgccgcatgtgaaaccatgggttcagcaagttgcatttgcactgataagacagggactttgaccacgaaccacatgattgttgataaggtttggattggtgatgtcaagtttgttggggacaaaaaaaattctgagctaaaaagcacgatttcagaaagagttatggcgatccttatacaaggcatatttgtgaatactgcgtctgaagtggtgaagggagacgatggaaaaaataccatcttaggcttggctactgaaacggcattattggagtttggcttgagcttggaagaacatttatatgatgactacaataagttgactagaataaaagtagatccttttaattcagttaagaaaaagatgtctgtgacaatacaattacctaatggaggcatcaggaccttctgcaaaggtgcgtcagaaattattctggaacagtgcaataccatccacaatactgatggaaatatagtaccgctgtcagaaatgcagaagcataatgtattaaatataatcaattcgtttgcttctgaggcattgagaacactttgcatcgcatttaaggatatggatgaatttcccaatgatcaacctatatcagatgatggttacacactaatagcagtttttggtataaaggatccagtccgtcctggtgtcaaggatgcagtaaggacctgcatggctgctggtattagagtaagaatggtgacgggagacaacatcaacactgctaaagctattgccaaggaatgtggaatattaacggaggatggaatagcaatagaaggacaacagcttaacaataagagctcagatgaactgaaggaactcctaccaaaaattcaggtttagttgtactctcttgttttcttttcattaattaaatgcgaatataagctaaatctatgtcccaagctcaggtaatagctcgctccttgcctatggacaaatacaaattggtgacaagcctgaaaagtatgtatcaagaggttgttgcggtgactggtgatggaaccaatgatgccccagcactgcacgagtcagatattggactagcaatgggtatcactggaactgaggtatctatgaatgtttttcggtaatttatgttgttttattcctctatgaccttaatatgttcggtttgagcgtgtcttgaagtgagaactgggaaatgccctttagtctaaaccaattttctacaagggcttatctatatcctgacttaataataatattagctgtattttttaaaaacatattcctagatgtttaatattgtcagtgctaaaaaaaggagcaaacggtacaaaaatacaatttaattattttgcataaggtcgatttccttggctgtaacagtattcatcattgtttagtgacatttgattttccgtgtatgatatatctgtggacaagttgtgatgcaagttttatctgtttgcaggttgcaaaagagagcgctgatgttataataatggatgacaatttcgaaaccattgtaaatgttgctagatggggccgtgcagtttacttaaacatccagaagtttgtgcagttccagcttacagttaatattgtggctctgattgtgaattttgtctcagcgtgcatcataggtattagcacacttgctaccactctaatattattgatctaatgatgactgtttgaaatgaatgtgtattgttttctagaataaattcgtatgcattttatttggaatgcatatgcaacttatgatataatatttcctttttgctacacattttaataataaagtcatatatattgttattatggctggaaatagaggattgatagggtagatcgccctcaagtcgctggcttctccggaagaccgaggctttgatctgtttgacttggtgggcaaaatccttaatttctttattgcttaagtccctaatacaatagcaggccccctttatatactaggtgccagtctaatatttaggaaatctaagacaaactaggaataggaaacagaatcctaaaccaactagaattagatatatctactgattattcctattcctattcctatggtatttgattccataacgccggtctataataattgtcctctcttcttccctttacttgaagggagtgcaccacttactgctgttcagttgctatgggtgaacatgattatggatacgttgggagccttggccttagccacagaaccaccaaatgacgaaatgatgaagaggccccctgttaggcgaggagataattttatcactcggattatgtggagaaatattcttggccaaggtttgtatcagctccttgtgctggctactctaatggttattggaaagaaactccttagtattgaaggtcctcaatctgataaaaccatcaatactctcatattcaactctttcgtcttttgccaggtatgtgaactacaagtcccttttacatgcaaatgagtcaattttgttgtttttgtctatggattttatttatgtttgatatttcaagttctcatattataattgacaggctatcatttacattattctcggccatttcagatgtcatgttcactttgtagaggctaagacatttaattctgtgcaaagctcattgacatgtgatatctgataataattttcaatatgccatggactctctgatgacttcagcaaaccatagaaaataatcatgtagtaatcagtatatgtttttccattttcgttagaaaaacgatccagacaaatttaataattttcagaacaaaacaaagctttttccgtgcgcatttcacatatcctgatgctatgattctataaaatgcaagtgcaaagtaaaggcaatattcattaaacaagtgatctattgtggaaattaggaatcagtgctttattttaatggtaattttaccatccttgagaaggtatcgggaggtaacacattttctagtgtaaaatttggtacattcaggtactaaaataccttgagtataaaaaacttttgtgtaaaatttaggtaccttgaggtactttctcaaggaaggtaaaatttctcttattttaacggtaagtttcatctgacatgttaccatgcttccaggttttcaatgaaataaattgtagggagatggaaaagatcaatgtcctccaaggtatcttcagaaactggatctttgttggtatattgacagctactgtcatattccaagtgatcatagtagaatttcttggcacttttgcaaacactgtaccattgagcggggagctgtggctgctcagcgtcgtcattggctcaattagcatgatcatctctgttatcctcaagtgcattccagttgaatttaataagacaaatactaaaccccatggttatgagttgattcctgaaggcccagagattctatag</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062467.2 RefSeq:Os05g0495600]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 5]]
 
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[[Category:Chromosome 5]]
 

Latest revision as of 08:34, 14 May 2015

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Structured Information