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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0542800|
| |
| − | Description = Virulence factor, pectin lyase fold family protein|
| |
| − | Version = NM_001062733.1 GI:115465196 GeneID:4339483|
| |
| − | Length = 2847 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0542800, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:27001561..27004407|
| |
| − | CDS = 27001733..27001888,27001974..27002105,27002205..27002375,27002453..27002479,27002584..27002791<br>,27003194..27003275,27003418..27003526,27003674..27003790,27003916..27004058<br>,27004113..27004194|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:27001561..27004407
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:27001561..27004407
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcgattcttcgtgtgtccgtgatgcggctggttgttgcggccatggctgttgcagctggtgttctcttcttctccggcgccggcgaggcgcgcgtgctcctcaccctcgacgacttcggcgccgtcggcgacggcattaccaacgacacgcaggccttcttggacgcctggaacgccgcctgcgcctcgacggagccggccgtcctcgccgtgccggccgggaagacgtaccagatctggccggtgcggctcgccgggccctgcaagaagaagctcaagctcatgatttccgggacgatcgcggcgccggcgagccccgacgagtgggcggggcgcgacccgacgaagtggctctacgtcttccgcgtcgacgacctgtccgtctccggcggcggcaccatcgacggcatgggcgccgagtggtgggcgcgctcctgcaagcgcaagaagaccaagccttgcagcacggtgtctgctcccaaggcgctgcagttcgaggagtgcaggcgggtgagcgtgcaggggatcacgatgcagaacgggccgcagttccacctgatgttcacccggtgcacggacgtcaaggcaagcttcctccgcgtcgtggcgccggagagcagcccgaacaccgacgggatccacctcaacgacaccacccatgcccagatcatggacaacctcatctccacaggagatgattgcgtgtcaatggttggcaattgctctgacgtccgagtgaaggacatatcatgtgggcctggacatggcatcagtatcggaagcttaggcaagaaccggaccactgacagaatagagaacgtgagggtggacacctgcttgctgacaaacacaaccaacggtgtacggatcaagagttggcagggagggatggggtatgctcacaacctgaggttcgagggcatcgtgatgaagaacgtctccaatccaatcatcatcgatcagtactactgtgaccaaccaacaccctgtgcaaaccagacgcaggcggtggaggtgcgcaagatcgagttcgcgggcatccggggcacgtcggcgacggagcaggcgatcaagctggcgtgcagcgacgccgtgccgtgccgggatctggagctgaggaacgtcaacctgaccatggtgggcgtcgtgccggcgtcctgcctcgccaaggcgccccacaggatgctcggcgacgccacgccggcggccagagtcggttcttga</cdnaseq>|
| |
| − | AA = <aaseq>MAILRVSVMRLVVAAMAVAAGVLFFSGAGEARVLLTLDDFGAVG DGITNDTQAFLDAWNAACASTEPAVLAVPAGKTYQIWPVRLAGPCKKKLKLMISGTIA APASPDEWAGRDPTKWLYVFRVDDLSVSGGGTIDGMGAEWWARSCKRKKTKPCSTVSA PKALQFEECRRVSVQGITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTDGIHLND TTHAQIMDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRIENVR VDTCLLTNTTNGVRIKSWQGGMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQ TQAVEVRKIEFAGIRGTSATEQAIKLACSDAVPCRDLELRNVNLTMVGVVPASCLAKA PHRMLGDATPAARVGS</aaseq>|
| |
| − | DNA = <dnaseqindica>173..328#414..545#645..815#893..919#1024..1231#1634..1715#1858..1966#2114..2230#2356..2498#2553..2634#attcaaccgcaaaagcaacctagttagtacaaggcagcacatgcgctgctattagtagcagctgctaggtgtcctgctattttgttgccctgcttcctctaatcttcctcttcttcttctccttcaatcgtgtcgtgtcgtctccttgttcggttctttggtgcaggaagcaatggcgattcttcgtgtgtccgtgatgcggctggttgttgcggccatggctgttgcagctggtgttctcttcttctccggcgccggcgaggcgcgcgtgctcctcaccctcgacgacttcggcgccgtcggcgacggcattaccaacgacacgcaggtgaggtgttcgagctcggtgcaatttttttttttggtcggcgagaactctggcacgacggtgcactctgtcttttcgtgtctaggccttcttggacgcctggaacgccgcctgcgcctcgacggagccggccgtcctcgccgtgccggccgggaagacgtaccagatctggccggtgcggctcgccgggccctgcaagaagaagctcaagctcatggtacgtacgtgcttgccccgtgtcgcgccgcgcgccggcggcggcggcggcgttcgtctgttcgattcgatgacgcgagctgcattgtgtttgtgacagatttccgggacgatcgcggcgccggcgagccccgacgagtgggcggggcgcgacccgacgaagtggctctacgtcttccgcgtcgacgacctgtccgtctccggcggcggcaccatcgacggcatgggcgccgagtggtgggcgcgctcctgcaagcgcaagaagaccaaggtaacaacaacaaccaattcgccattgttaaccatcaaagcatcatctgaacgtttgctcttcttgcgttcttgcagccttgcagcacggtgtctgctcccaaggtgagcgagagcgaacgctcctccattccggccgccggagtacggtcgccggcggcgaccgtgactgattcttctctctgcgattgcattgcattgaattgcaggcgctgcagttcgaggagtgcaggcgggtgagcgtgcaggggatcacgatgcagaacgggccgcagttccacctgatgttcacccggtgcacggacgtcaaggcaagcttcctccgcgtcgtggcgccggagagcagcccgaacaccgacgggatccacctcaacgacaccacccatgcccagatcatggacaacctcatctccacaggtcagtgtgctgtgcatgccaatgccatgacaaaattcggaatgtacttgcttgcaagcttggactaatcttcagtttcagatgctgactttctgagacagtgtgtcagtgtctctcctacttctggtcaaactaattcagctatctgattccatttttcgcattttgttattcaagataagatcaaatccgccaagtcggcgcccaaaatcgaataattgacctggaaaaggaatacttgaaagttgttaaattaatgtagttgattgataagagatcaggtcatacattgctgctcttggtcagaatcttgggcttcctttgaagtttgaagcaggcagtgattaccgctgatatttggatgattggttaattaatctgctgtttaatcactttcttcaggagatgattgcgtgtcaatggttggcaattgctctgacgtccgagtgaaggacatatcatgtgggcctggacatggcatcaggttgcagtactttccaggattccatgccagtctttgcccatgatctctgatcagtataacaatagatttttctgtttctaaagaggattctgttactggaactgccaatgtcactgacacgtggcacttgtttgattgacagtatcggaagcttaggcaagaaccggaccactgacagaatagagaacgtgagggtggacacctgcttgctgacaaacacaaccaacggtgtacggatcaagagttggcaggttagttgcaggacatcacacttctgaattctcacaagaacaatctgatgaggggaaaaaacacttgcagttcttggttctgacaagaacaatctattcagaaaaaggagtaattatatgacaaaatgcaactttgtgcttgatcagggagggatggggtatgctcacaacctgaggttcgagggcatcgtgatgaagaacgtctccaatccaatcatcatcgatcagtactactgtgaccaaccaacaccctgtgcaaaccaggtaataatctgcattttcacctgcaaagcatcgtatcatctctgaaactctgaacttttgccattgttcagagcactagttcatcatctctgaaacttgggaatttttcgtctctgtggatgcagacgcaggcggtggaggtgcgcaagatcgagttcgcgggcatccggggcacgtcggcgacggagcaggcgatcaagctggcgtgcagcgacgccgtgccgtgccgggatctggagctgaggaacgtcaacctgaccatggtgggcggcggcgcggcgtcggcgttctgccacagggcgtccgggaaggcggccggcgccgtcgtgccggcgtcctgcctcgccaaggcgccccacaggatgctcggcgacgccacgccggcggccagagtcggttcttgatcgccgccggcaatgcccgatcctggcaacgatcaccggaaaaaagctgaagtataaataccgtacacgtaggtgtagaaactgttgccgtatttgggagagtgtatgagtacagagagttgtaagctgtatacgacgtttgtgtcaagaattttttagagggcattatgtgaagttaaaatggatacaaaaaaacataattttaccggagtt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062733.1 RefSeq:Os05g0542800]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
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