Difference between revisions of "Os06g0109400"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
GeneName = Os06g0109400|
 
Description = AAA ATPase domain containing protein|
 
Version = NM_001063111.1 GI:115465953 GeneID:4339880|
 
Length = 4714 bp|
 
Definition = Oryza sativa Japonica Group Os06g0109400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
 
AP = Chromosome 6:549938..554651|
 
CDS = 549972..550770,551577..552190,552392..552544,552769..552885,552972..553076<br>,553269..553334,553430..553494,553577..553778,554026..554169<br>,554293..554340|
 
GCID = <gbrowseImage1>
 
name=NC_008399:549938..554651
 
source=RiceChromosome06
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008399:549938..554651
 
source=RiceChromosome06
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggggaagcgcgcgcgccacggcggctccggcaggtcccactccccctacttcgagtcccagctccgccgcctcatcaccgacggcggactctcctcctcctccgccgaggacgtcgccatcgccctccgctcccgcttccccgagttccgccgccacaagctcgaccccttcacctccgccgtccgccgcgccctcaactccatcccctccgactcccactccgactccgccgacgactcccacgcctccactccctcccaacgccgccgccgccgcccccgccacgacgcccatgccaccgcctcatcctccacctccctctccgacgacgccgcgcacccaccgcctccccccatctacgacgtcaccaagtccatgctccgcacccagtacgcctcccagactcccaagcgagacaccggcagcaaccagcagctggaaatcgagatcgccgccgagaagccccgccgattaatcacctccgatggcggcgccggcggcgaggccaagccggagtccgctccacctagcgaaggaggcgatagagggggcaaggggcccacgttttcggatcttggggggatggagtcggtgatagagcagctaatgatggaggtggtggtgcccctatgccatccggaggtgccgcgctggcttggggttaagcctgtggctgggctgctgctgcacgggccaccaggctgcggcaagaccacgctcgctcatgccatcgccaatgagaccggcgtgccattctacaagatatcggcgccggaggttgtgtccggggtctctggggcttctgaggaaaacatcagaagcctgtttaagaaggcgtacaggactgctccatcaattgtatttatagatgagatagatgcgattgcatccaagagggagaatctgcaacgggaaatggaacgacggatagttacacagttaatgacatgcatggatgaataccaccaacaaattggctctggtagcggtgatgtgggttcagagtcagctgaaaagaaacctggctatgttattgtcattggagctacaaatagacctgacgctgttgaccaagcacttcgtaggccaggaaggtttgatcgagagatctctcttggtgttccagatgagtatgcacggaaaaagatacttatgatgcttacccggaatcttcgactggaaggtcagttggacttgttgaagatagcaagggccacatcaagctttgttggtgcggacttgaaggcattggtggataaagcggggaatctagcaatgaagagaataattgatagaagaagagctcagttttgtcaggagcatgatgaaaacagcaagcacgactggtggagacaaccttgggatgcaaatgagatagagggcctgagtattacaatggatgattttgaggaagcaaccaagatggttcaaccatctttgagaagagaaggattttcttctatccctgatgtcacatgggatgacgttggaggccttgattcgctaaggaaagagtttgaccgctacattatccgatgtatcaagcaacctgaagaatataagacatttggattgaatatgcaagctggctttttgctgtttggaccacccggttgtgggaaaacactgatagcaaaagcagttgcgcatgaggcaggggcaaattttattcatattaaggggccagagctgttgaacaagtatgttggtgagagtgaatcagaagttaggaaaattttcatccgtgcacaaactaatacaccatgcatcctgttttttgacgaggtagatgctttgacaacaaaaagagggaaagaggggggatgggttgttgaacgtctcctgaaccagttgcttattgaacttgatggtgctggtgaacggaaaggtgtttttgttattggagctacaaacagaattgatgtgatagatgatgcagcacttcgacctggtagatttggcaagaaacattatgtacctttacctggtgctgatgagcgggtttcgatattgagagccctcgctcggaacaaaccgatctcctccagtgttgatttgggtgcactggcacgtagagaggaatgcaaaaatctcactggtgctgacctagcatcaatggtgaatgaagcagccatggcagcattggaagagaggctggagttcctggagaatggggaatcgtcaatgagctcatcatctgcgattgagctccctcattttgaacgtgctctagcaaaaatgcagccatcagtatctgaacagcaaaggagacactacgaggcgttgtgcaagaaatactccgcaagctga</cdnaseq>|
 
AA = <aaseq>MGKRARHGGSGRSHSPYFESQLRRLITDGGLSSSSAEDVAIALR                    SRFPEFRRHKLDPFTSAVRRALNSIPSDSHSDSADDSHASTPSQRRRRRPRHDAHATA                    SSSTSLSDDAAHPPPPPIYDVTKSMLRTQYASQTPKRDTGSNQQLEIEIAAEKPRRLI                    TSDGGAGGEAKPESAPPSEGGDRGGKGPTFSDLGGMESVIEQLMMEVVVPLCHPEVPR                    WLGVKPVAGLLLHGPPGCGKTTLAHAIANETGVPFYKISAPEVVSGVSGASEENIRSL                    FKKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDEYHQQIGSGSGDVG                    SESAEKKPGYVIVIGATNRPDAVDQALRRPGRFDREISLGVPDEYARKKILMMLTRNL                    RLEGQLDLLKIARATSSFVGADLKALVDKAGNLAMKRIIDRRRAQFCQEHDENSKHDW                    WRQPWDANEIEGLSITMDDFEEATKMVQPSLRREGFSSIPDVTWDDVGGLDSLRKEFD                    RYIIRCIKQPEEYKTFGLNMQAGFLLFGPPGCGKTLIAKAVAHEAGANFIHIKGPELL                    NKYVGESESEVRKIFIRAQTNTPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELD                    GAGERKGVFVIGATNRIDVIDDAALRPGRFGKKHYVPLPGADERVSILRALARNKPIS                    SSVDLGALARREECKNLTGADLASMVNEAAMAALEERLEFLENGESSMSSSSAIELPH                    FERALAKMQPSVSEQQRRHYEALCKKYSAS</aaseq>|
 
DNA = <dnaseqindica>35..833#1640..2253#2455..2607#2832..2948#3035..3139#3332..3397#3493..3557#3640..3841#4089..4232#4356..4403#ccctcctcctcctcctctgccgccgccgccggcgatggggaagcgcgcgcgccacggcggctccggcaggtcccactccccctacttcgagtcccagctccgccgcctcatcaccgacggcggactctcctcctcctccgccgaggacgtcgccatcgccctccgctcccgcttccccgagttccgccgccacaagctcgaccccttcacctccgccgtccgccgcgccctcaactccatcccctccgactcccactccgactccgccgacgactcccacgcctccactccctcccaacgccgccgccgccgcccccgccacgacgcccatgccaccgcctcatcctccacctccctctccgacgacgccgcgcacccaccgcctccccccatctacgacgtcaccaagtccatgctccgcacccagtacgcctcccagactcccaagcgagacaccggcagcaaccagcagctggaaatcgagatcgccgccgagaagccccgccgattaatcacctccgatggcggcgccggcggcgaggccaagccggagtccgctccacctagcgaaggaggcgatagagggggcaaggggcccacgttttcggatcttggggggatggagtcggtgatagagcagctaatgatggaggtggtggtgcccctatgccatccggaggtgccgcgctggcttggggttaagcctgtggctgggctgctgctgcacgggccaccaggctgcggcaagaccacgctcgctcatgccatcgccaatgagaccggcgtgccattctacaagatatcggcgccggaggttgtgtccggggtctctggtatgctatccgattcttttcatgaaaactctgaacttagctaaacctttgaacatgtgttacaagcaagaacaaattagtttaacttactaaccaccaatcatgtttgctgctgggatgcttgaggaatgctaaattttgcaaatgctaatgtggtgttttctgaatcgcaacttctcaacatactagcaaatttggtaacctgttgtgtcgatgtctgcaagttcaggttgttcgttttaataacttataatgcaatcctcacttgataaatggaatttcatttgttaactaatggactctgaagctattagtgttcaatatgtacaaatagaccaggatcactgtttttattgctgcttcttacattagtcgtttgatctacttcacttagttttctttctcattagggaaggagtgcccgcaagtctagccgaacatagaactggtagtttctgcttgatgtcagtgtggcatgagattgatcctctatcaaattaggttcctgagttctattgttatactggtaatagtaatactctgccttgcaatgaaacataacacataggctttaaaggttctgattgctaatatgttctgcgatgacatagctccactgagatatgatccttagttgaaaccatatcggtcaagctttgtccttaccctgcataccaaatcagatatagcctatctcctattttcttttaccttttttaatatatatttcgtccctactcttagatagatctcttctatcagtagccatataagggtacaccttgtaaaccctcgttttcttgcaggggcttctgaggaaaacatcagaagcctgtttaagaaggcgtacaggactgctccatcaattgtatttatagatgagatagatgcgattgcatccaagagggagaatctgcaacgggaaatggaacgacggatagttacacagttaatgacatgcatggatgaataccaccaacaaattggctctggtagcggtgatgtgggttcagagtcagctgaaaagaaacctggctatgttattgtcattggagctacaaatagacctgacgctgttgaccaagcacttcgtaggccaggaaggtttgatcgagagatctctcttggtgttccagatgagtatgcacggaaaaagatacttatgatgcttacccggaatcttcgactggaaggtcagttggacttgttgaagatagcaagggccacatcaagctttgttggtgcggacttgaaggcattggtggataaagcggggaatctagcaatgaagagaataattgatagaagaagagctcagttttgtcaggagcatgatgaaaacagcaagcacgactggtggagacaaccttgggatgcaaatgagatagagggcctgagtattacaatggatgattttgaggtgaggtttccacctgttacatgtgcagctcaagtccaataactcctctgctaatgtcatcaagtgtaacttctaaaatagttttcctggccacgtatccaatgctttaatcatgattagttctgatctcatttcaactgtgtgccttatgtggactaaatagccatgctaatgaacctttctgctttttgtttgctgaaggaagcaaccaagatggttcaaccatctttgagaagagaaggattttcttctatccctgatgtcacatgggatgacgttggaggccttgattcgctaaggaaagagtttgaccgctacattatccgatgtatcaagcaacctgaagaatataaggtgaacatacttagtatgtcaataaaccgttttctacaattatttcttatgtctgttctattgttcctcttttagcgatgatgcagcctagtagtttagagtaccacatgacatacccatgatgtttatttgcaatatgttttgaagtttaggactccttttgcagtacttttacttatttgatttttttattccatgtccgctttgttgtctatattttccagacatttggattgaatatgcaagctggctttttgctgtttggaccacccggttgtgggaaaacactgatagcaaaagcagttgcgcatgaggcaggggcaaattttattcatattaaggtagttgatgcttatatttctgtattttgaccacgttcgttcagatttatacaaagtaacgttaagatattcctttgtgtgtttaggggccagagctgttgaacaagtatgttggtgagagtgaatcagaagttaggaaaattttcatccgtgcacaaactaatacaccatgcatcctgttttttgacgaggtaaaggattttggtttatctagccatatagtctgttccattgatgaaaacttggacacaagttactgaatgactccgaatgtttgataaattttgactgttaaacacacatcaagcagtgtatatgtgtggagtatgaagtcgtttttccaattctaagacgctcaagtgtaaacccatgtgatgttacaggtagatgctttgacaacaaaaagagggaaagaggggggatgggttgttgaacgtctcctgaaccaggtttgaatactttacaagttaatatatatttgcggtagttgatctgctaacaaggttctttttgttctgtgttactctaattgttttgttcacagttgcttattgaacttgatggtgctggtgaacggaaaggtgtttttgttattggagctacaaacaggtgctgtcagctgctgataggttctccttacatatttatcactgaacataaggctgaaactgcagctccttttctggtgcagaattgatgtgatagatgatgcagcacttcgacctggtagatttggcaagaaacattatgtacctttacctggtgctgatgagcgggtttcgatattgagagccctcgctcggaacaaaccgatctcctccagtgttgatttgggtgcactggcacgtagagaggaatgcaaaaatctcactggtgctgacctagcatcaatggtaagttatgactttttgttgagtggtttctccatttgaattttgtacagggtgatcatgtctgctttaatttggggcaatgtagttctttatatgttttagttgattattttcttcccctaggaacctatgggacattttgtgagttaaaccggatattggagtgattatagttgctttttgtttgaatattaatcatgtgattaaagaaacgtgcaaaatggaactaatgtggtccattcttcaggtgaatgaagcagccatggcagcattggaagagaggctggagttcctggagaatggggaatcgtcaatgagctcatcatctgcgattgagctccctcattttgaacgtgctctagcaaaaatgcagccatcagtatctgaacaggttagaagctcttaatagttcataaatgtcttgttgctatagcgaggagatgtacatcagattgtcatggtcaacccttttgatgacacgtttcaccttggttttgttctttggtcacaacagcaaaggagacactacgaggcgttgtgcaagaaatactccgcaagctgatatatattgcgccatgcttacagagatccatgtcctctgagttgcttgcagggaaaatacaggtttcgcttgcaaccaattttggttttgccctttttttttgttcccctttgagtaggccttgtggcaattttgtgcgaccgaaacatagatggttgagtgagtagtagtatgaatatgcgagaaaaatagttgttttttttttcttttcacttattgtaccattcatcatcttgtattgtaatacaaacttcatattggttatgagattgcataatcatccaattaagcccctactatgctccaagttg</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063111.1 RefSeq:Os06g0109400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 6]]
 
[[Category:Chromosome 6]]
 

Latest revision as of 08:44, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information