Difference between revisions of "Os06g0135900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0135900| Description = Similar to Sec1p-like protein 2 (Fragment)| Version = NM_001063257.1 GI:115466245 GeneID:4340037| Length = 8079 bp| ...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os06g0135900|
 
−
Description = Similar to Sec1p-like protein 2 (Fragment)|
 
−
Version = NM_001063257.1 GI:115466245 GeneID:4340037|
 
−
Length = 8079 bp|
 
−
Definition = Oryza sativa Japonica Group Os06g0135900, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
+
Please input expression information here.
−
AP = Chromosome 6:1899869..1907947|
+
 
−
CDS = 1901314..1901321,1901689..1901770,1901847..1901966,1902568..1902663,1902753..1902878<br>,1903134..1903230,1904485..1904555,1904638..1904733,1904812..1904895<br>,1905002..1905189,1905784..1905910,1906384..1906416,1906498..1906594<br>,1906701..1906751,1907089..1907167,1907382..1907463,1907658..1907716<br>,1907830..1907902|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008399:1899869..1907947
+
 
−
source=RiceChromosome06
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008399:1899869..1907947
+
 
−
source=RiceChromosome06
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atgtcgatgtcggggtcggacttcggcgccccgtgcgacgaccccaagatcttccgcaacatctgccgggatcgtatactcaaggacttgctgcagccggacaaagataaggagaccaaaagctcatggaaggttcttatcatggacaaatttacggtgaggatcatggcttatgcctgcaagatggcagaaattaccgatgcaggaatctcgttggttgaagatcttttcaagcgaagggagcccatgccttccatggatgcaatctacttcctccagccactgaaagaaaatgtcataatgcttctatctgacatgtctgggagatgtccactgtacaggaaggcatacatattctttagttcaccgattcctaaggagctggtctcttacataaagaacgacagcagtgtgataccacgtattggtgcactaagagagatgaatttggagttctttgcaattgacatgcagggattcacaactgaccatgacatggcattcactgatttatatagtgctcagcacaactcgaaaaagttcaatgacactataagcactatggctactcgcattgctaccacatttgcttcgttgaaggaatttccttgtgtgcggtatcgtgccccaaagggcacagatccaatgacaacaccaaaatttgacatggttccaaaatggttagcgactgctgtttgggatattgtgtcaaaatataaatcaacaatacctgaatttccccagaaggagacatgtgaactgctcattgtcgacaggcctatagatcagatagcacctgttattcatgaatggacctatgatgcaatgtgccatgatctacttgaaatggatggccaaaaatacatatatgaggtgtcgaaagcgggatcagaacctgagagaaaggaggctttattggaggatcatgatcctctctgggttgagcttcgccacattcacatagctgatgctagtgagaggttgtatgataagatgaataactttgtttcaaagaataaagcagctcaacttcattcaagagatggtggtgaaatttctacaaaggatctgcagaagatcgttcaagctttgccacaatacggtgaacaagttgagaaattgaccctccatatagagattgctggaaaaatcaacaagtttatcagagagtatggtctccgtgacattgggcaggtggagcaggatctagtttttggagatgcagcagccaaggaggtgatcagtatcctcaggtcaaagcaggatatgagcccagaaaacaaattgaggttgcttattatatatgcaattgtatatccagagaagtttgaaggtgacaaaggggaaaagttgatgcagctagcaaaactgccacatgatgagatggatgccataaatagtttaagatacttggttggttcagatacaaaaaaggcatcacggcctggcggcttctctctcaaatttgatgcacaaaagaaaaaaaatgctgcgaggacagaacggcaggatggcgatgaaacctgggcattatcacgttttttcccacttatagaggcatttgattga</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MSMSGSDFGAPCDDPKIFRNICRDRILKDLLQPDKDKETKSSWK                    VLIMDKFTVRIMAYACKMAEITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIML                    LSDMSGRCPLYRKAYIFFSSPIPKELVSYIKNDSSVIPRIGALREMNLEFFAIDMQGF                    TTDHDMAFTDLYSAQHNSKKFNDTISTMATRIATTFASLKEFPCVRYRAPKGTDPMTT                    PKFDMVPKWLATAVWDIVSKYKSTIPEFPQKETCELLIVDRPIDQIAPVIHEWTYDAM                    CHDLLEMDGQKYIYEVSKAGSEPERKEALLEDHDPLWVELRHIHIADASERLYDKMNN                    FVSKNKAAQLHSRDGGEISTKDLQKIVQALPQYGEQVEKLTLHIEIAGKINKFIREYG                    LRDIGQVEQDLVFGDAAAKEVISILRSKQDMSPENKLRLLIIYAIVYPEKFEGDKGEK                    LMQLAKLPHDEMDAINSLRYLVGSDTKKASRPGGFSLKFDAQKKKNAARTERQDGDET                    WALSRFFPLIEAFD</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
−
DNA = <dnaseqindica>6627..6634#6178..6259#5982..6101#5285..5380#5070..5195#4718..4814#3393..3463#3215..3310#3053..3136#2759..2946#2038..2164#1532..1564#1354..1450#1197..1247#781..859#485..566#232..290#46..118#ggagaggagtggaggtagaggggatcaactccggtcggcggcgggatgtcgatgtcggggtcggacttcggcgccccgtgcgacgaccccaagatcttccgcaacatctgccgggatcgtaagctcgctcctcccaccccccacctcttctctgttcctcgtgtttatctatgtctgtatcatctgatcgctgatgccgcgcgaatcgatcgcttgctgctcttctcacaggtatactcaaggacttgctgcagccggacaaagataaggagaccaaaagctcatggaaggtagtacaaaagaaatgcattccttttaccctttcttttttggctccatctattcacatttctgttaattcatattttttttcctaacaaggtactactatattgtccccaaatgtggttattcttcaaaaaactatcaatgcatcgagtgtgaagggggatatacatattgatttcgttaatctcctgtgcaggttcttatcatggacaaatttacggtgaggatcatggcttatgcctgcaagatggcagaaattaccgatgcaggaatctcgtgtaagtttatcaagtctggacctgtcatcatattctagcgtacaaacagataattgtggacttgttgaaaaaaatgtgttttgttttctattgcattcacttggagggcgcctattcagaggtgcctggttcagcaaacagcacttcagtaagctggttgattttaatttataaaaaaaagacacttacatggacattttatcttgtcctgcagtggttgaagatcttttcaagcgaagggagcccatgccttccatggatgcaatctacttcctccagccactgaaagaaaagtattattcgatcgccattgaccacttgctttcgttttatcattctgcagcagcaaaattgatcgcaagtaccatatgcgtggagtaatgatctcgtctttgattcattttgtgattatgatatttcttttaggttgtagtcagtgtgtagtctatagtatgatactgaaggcatatatgcatctcaagccaaagctgtaacactgcatttccttttggtgcaaccttttttccttagacgatttttctgctagttaattaattaacgccgcataatcaacggttgaagttatattgtcttgaatcttctctgatatgtgagcctcgcaacctgcagtgtcataatgcttctatctgacatgtctgggagatgtccactgtacaggaagtatgtcaaaccgaattttcaatttgtaacccggaatgccaattacaaaagcttcaaatgcaacaaaattttgactcacatgttaatatctcacttgattttatagggcatacatattctttagttcaccgattcctaaggagctggtctcttacataaagaacgacagcagtgtgataccacgtattggtgcactaagagaggttaattatcctgtagtttgtaccttttatttctttgatttttacagatggattttctaatgccgatattgttaattccagatgaatttggagttctttgcaattgacatgcaggtattcatagccttcgatctatatgatctactagttatgcatattttttcttcattgctggctaagaatctatttagttctgattttagtttgttactgtcaagtatgataaacatatggcaattataagaagcaactggacgcaaacataaaactagcattgattgataagaagtttggacaatttagaactgcatttgcaccgtgaaggaaaattaaaacggttcatttgcatcaatcaaatgaattcatttccagttttgaaatattcgtgatattaccgaaggtgaaaacatagcaaatgatgcctgctaccatgctacacatgttggatggactgtggatgtattcgcatgctgttggctggttctttcatttgatattagggtggtctgttcttttttttttaaaaaaaatagaaatccgaattctcaagattaatgtaatgatttctctatgtggcatatctgcagggattcacaactgaccatgacatggcattcactgatttatatagtgctcagcacaactcgaaaaagttcaatgacactataagcactatggctactcgcattgctaccacatttgcttcgttgaaggcatgttaacatacttcatttgttattattattatctatttcctgtccactagtactaatttcatcacattaccgaaatatttcttaactgtctttccaattcagcatgtgtagcatgtattttttcctgatcgacatggttccaaaatgtttgatgacatatgttcttgcttgtcagtttttcattcccatttctccagccaaaagtgccaaccctgaagatctccttccttgaatcaccaggccgtaaaaagtacatattaaattccttgaaaaatgcaaagaatatgtcatgttaatgcacttcacagaacttcattaatagcctggtaactgacttaagtgggtgatattgtcttagcaatctcttgtggctgtgtgttgttgtggcagactataccttccccttgtgaatatttctgaactaaatattttaaaaggtatacatatacaatgatctactggacaccagcagttttgagtatctcatatcgttcttatgtattcttccagtctttaaatctatcaatgaaatatatatagcatcattattcctcttttttgtcaaacacaatctgattcaagttataacaggaatttccttgtgtgcggtatcgtgccccaaagggcacagatccaatgacaacaccaaaatttgacatggttccaaaatggttagcgactgctgtttgggatattgtgtcaaaatataaatcaacaatacctgaatttccccagaaggagacatgtgaactgctcattgtcgacaggcctatagatcaggtgctgaaggataacttatgtttcaataacttgtcagtgtagaagtatattgaagaaattcagtatctttcctactgcttacaataatttccgtatgtctgcaaagatagcacctgttattcatgaatggacctatgatgcaatgtgccatgatctacttgaaatggatggccaaaaatacatatatgaggtaaatgtgatatcgtattataataatgaacatgatctgttcacttgccctattcttatgtttaatttctgttggaaggtgtcgaaagcgggatcagaacctgagagaaaggaggctttattggaggatcatgatcctctctgggttgagcttcgccacattcacatagctgatgtgagttatgtgttgtactgttgtttaagattgttttaagtacaatttggtctctgctttctaacactaattgaaatggcaggctagtgagaggttgtatgataagatgaataactttgtttcaaagaataaagcagctcaacttcattcaaggtgcatgatcttcctcggtttagaggaacacaactgtaaatgttttaatagagtcgaatacaatatgccatttgaacaatgctactccattggtgtcgtttaccgttctagtttactgatggcagtcatgttttgtatcagctcttggatatccattatgctaggtacttatctgcaacagaatttgttgcagtgtaaacacaatttgatctacatctttactaagttactggcatatggcattattttttgaacgactgatttagtttggatatgaactgtaactctgatagacaagtattactggaatccttacaattcgaaggaaacaaagtagagtaaattccctgtgtacccctgaaaactcactcaatccctttcatacccctaaaatttacccgatcccttctgtacccctgaaatttcaatttgatcccttccatgcccctaccgttacattttccatcattttactgttacgtttggttgcaaatgtcttttttgcccttgatgctttaggtttaaatataagcttcaaaaataattgaaaattttgtttgagtgcacatcgtgtgcattttataaaactaatgagactaaataattagtgcagaaaattttgacataaattttgaaaataaaataaatgtaaaaaattaaaatttttatttgaaattttaataggacaatggatttttttatcaggagcattcataaaaaaaaatgttgtgaacattggtatacctatctttatatgaatgctcctcatttttatgaccttttttttaaaaaataaatacgtattttttttatttcattatctaaaaatatttttttgggataaataatgcatcgcacaacaaactcataactataatagtctcatgcgagaagcttttatatttttaataatgtaattcatgaatttctttgttcatccaagggtaaaatggtcatttttatagaaaatacacggtcaactaacggtcaactgacgggaggggtatgcaagggatcaaaatcaaattttgggggtatataaggaagtaagcaaaattcaggggtatagaagggattaggaaaaatttcaggggtatataagggattttctcaacaaagtaagctgtggtttgtagtttgatgtcaaggttacatcaaatgttgatcgatcagttgtttgctagccaaagtacagaaagtgcattgttctaagttctttcatattgcatgcttatgattccctttctcaattagagatggtggtgaaatttctacaaaggatctgcagaagatcgttcaagctttgccacaatacggtgaacaagttgagaaattgaccctccatatagaggtagatgattatttccatagtatttcctgtgcgtgctttatgttattttgtttacccttacaaataagttcgggatttctaggaactatcaagtaaatgtgaaaagaagcagctattgtttagaaaaacatgttgactgttgtcaccttaatacatacttatatgttcatccttgatttatgattttttttacaacttctatcttatcatcaaaataataaaaaatgtaatactcactattgaacttttattcagattgctggaaaaatcaacaagtttatcagagagtatggtctccgtgacattgggcaggtggagcaggatctagtttttggagatgcagcagccaaggaggtgatcagtatcctcaggtcaaagcaggtttgttaagaaagagagaatgaaagcagtcttactgctaattatttgtcagtttttattcaatgcttactgaactttctattgttcaggatatgagcccagaaaacaaattgaggttgcttattatatatgcaattgtatatccagagaagtttgaaggtgacaaaggggaaaagttgatgcaggtatttcctatcaagttttacattacttattagtgcaattattacattaatctgtcacaacccgaggacatgacgggataaacaccgtcgggtggatagatgcgtggaagcggctgctgctgctaggggtgagaggtagatttaggttggtaggacattgagagggattagattggattaatctgatttatcacttaattcataattgcataggatacaatccatccttatatagatgggacgacttaacccctaagaatggactcaatctaatcttacctaacgaactactacagtagcgtgctacccagagggtgttgggatgaccactggcctcagcctctcagcccaattacccatgacataatcatacataaacacagtttcggattttgcttgttataagcgtggaagtatagattaccaggttgactattatcattgttcaatggtttccttgagtgcttctatagtgctattcggagtgtttactaaagaaaatgtgacacagagggttctattagttggttttggggggtacaattgcatgcagttgattatataaacatatgacattttgaacaaactttcatttatgcagctagcaaaactgccacatgatgagatggatgccataaatagtttaagatacttggttggttcagatacaaaaaaggcatcacggcctggcggcttctctctcaaatttgatgcacaaaaggtgaggtcatgatttgagctaaattatttctaccttcttcccttgaactaacatgtgtgcttgacttatataccagaaaaaaaatgctgcgaggacagaacggcaggatggcgatgaaacctgggcattatcacgttttttcccacttatagaggcatgtggtataactattactactagtttacttctaaacttcctgcatcaaatatctccttggctaatttatttctgtgtgcttagtacaattaagaatattttcttatgaaattctattattcaccttttctgaaaccaacatatagcaaatttctaaatatgggaacttcaagaatgtggttcacattctgttaataaaatccggttcgtaataaactgaactggataataacaaacatagtggcaatgatttttggtgatgcctgttggataatacttttgttgagtggttatatacaaatcgtacttaaaataatggttcttattcgttgtttaaattaaggacttgcattcattctctaacaggagttgattgagaaactgagcaaaggtgcattacctttgaatgaatacccatccatgagtgaacccagttccactgaacaaggatctacacaaagtgcagccgcgactaaaccagcacaagcacaacccatgtccaggagatcgcggcggacaccaacctgggctaagtctcgaaactctgatgatagtcaatcaaggtattcaacaaatataattttctatttgaaccacttatccatataaaagtttttctagtaaaagtgttatatcagcttcataccttttacctgctttcttatcatcacaaactggattggcagtgactcctcggtcttgagacatggatctaatgacttcaagaggctaggcaaccgaatttttgtcttcatgattggtggagccactagatcggaagtaagccatttactgcaaactatttaataactcaaatcccattctgtttatgtggtcatcaattcttacacttaaatggatcagctgcggacggtgcacaagcttactatgaaactgaagcgcgaaattgtcctgggatcttctagcatagatgaccctccacaatttatttcggtaaacccatcctgtacaacacaataatgtattcgaatttctttcttttaccattatcatgcaatcctgttgcggcaaatagaagtttcttggattatactgttacattagttttaaatgtggaattgccaggcgatatttgaccaattgtactcattgtttgaattcaaaaatgcagaagctgaagatgctaactgcaggtggtgccaatgacgtctaaacttcgcacttagtttgcaaatcaaccgatgaaacaaacttgtcaccttttggtaaggtacctgctcgtactgcatgtctactcttataatttcctttctccactctgttggttcaatttggagtatctttgtttcaaaataataataataattcgagtgccttttaacacaaacatgtatgctgcttcatattgcagaaacccattgctacgaacagttagaaacgttggatgtcatcaatgactggactactcacaataattacacgattttttcatagtctagtatatataccaagtgagaagaagtgtcaaatgtacttaaaacatgtatgtagacaacatattttgcccacattatttattcttctttcagatgtaaaacgtagaacagttgcgacagttgttttgcccaaatttgtatatttatgaacactacaacaatgacatggtgacgattacactcatggatcaatcgattccgataattcgtcgtgaaatcgagttatttatggcgatgtggaaaatggttatagaggtgcgaatgtgcgactttataggctagttatagatgtaagttcaatgtgtatcgtatctgtcgagtttgtatagttttttttttaaccgagctatgaaatttaataattc</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063257.1 RefSeq:Os06g0135900]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 6]]
 
−
[[Category:Chromosome 6]]
 

Latest revision as of 08:45, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information