Difference between revisions of "Os06g0143900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0143900| Description = Similar to Coatomer protein complex, beta prime| Version = NM_001063314.1 GI:115466359 GeneID:4340097| Length = 8815...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os06g0143900|
 
−
Description = Similar to Coatomer protein complex, beta prime|
 
−
Version = NM_001063314.1 GI:115466359 GeneID:4340097|
 
−
Length = 8815 bp|
 
−
Definition = Oryza sativa Japonica Group Os06g0143900, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
+
Please input expression information here.
−
AP = Chromosome 6:2319838..2328652|
+
 
−
CDS = 2320326..2320345,2320800..2320911,2321101..2321245,2321362..2321468,2321581..2321674<br>,2321761..2321957,2322320..2322391,2322513..2322627,2323069..2323185<br>,2323262..2323353,2323454..2323630,2323755..2323829,2323920..2324060<br>,2324680..2324868,2325307..2325372,2325454..2325604,2325727..2325795<br>,2326302..2326450,2326535..2326666,2326765..2327090,2327176..2327212<br>,2327935..2327988,2328112..2328174,2328298..2328318,2328473..2328475<br>|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008399:2319838..2328652
+
 
−
source=RiceChromosome06
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008399:2319838..2328652
+
 
−
source=RiceChromosome06
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atgccgctcaggttggagatcaagaggaagtttgcgcaacggtcggagagggtcaagtcggtggatctgcaccccacggagccatggatcctgtcgagtctttactccgggagcgtgtgcatctgggactatcagtcgcagacaatggtgaagtcatttgaagtttcagaattgccagtgcggtcagcaaaatttatttcacggaaacaatgggttgtagctggtgcagacgatatgttcattcgtgtctacaactacaacacgatggacaaagttaaggtttttgaggctcatactgattatattagatgtgttgcagtccatccaacacttccatatgtgctttcatcatctgatgacatgttgataaaattgtgggactgggataaagggtggatgtgcactcaaatctttgagggacattcacactacgtgatgcaagttactttcaatccaaaggatactaacacttttgcaagtgcatctcttgaccgaactacaaagatatggagtttgggttctccggatccaaatttcacactcgatggacatcaaaagggtgtgaactgtgttgactacttcactggtggtgacaggccctatttgatcactggttctgatgactccactgcaaaggtctgggattaccaaacgaagagctgtgttcagacacttgaaggacatacacacaacatttctgctgtttgtttccatcctgagcttcctataatcattactggatctgaagatggcacagttcgcatatggcattcgacaacttacagacttgagaacacgctaaactatggtcttgaacgagtctgggctgttggatacatgaagggttcaagaaggatggtaattggttatgatgagggaactataatgataaaaatgggacgtgaagtacctgtggcaagcatggataccagtggaaaaatcatttgggcaaaacataacgagatacagactgtgaacatcaaaactgttggtgcaggctttgaggttacagatggggaaagattgccattggctgttaaagaattaggaagttgtgatctttacccacagagcttaaagcataaccccaatggaagatttgtcgtagtttgtggagatggtgaattcataatttatactgcattggcttggaggaataggtcatttggatctgcattggagtttgtttggtcatcagaaggagagtatgctatcagggaaagtacatcaagaataaagattttcagtaaatcatttcaggagaagaaaactattcgccctacattttcagctgaacgtatttttggtggaatattattggcgatgtgttccagtgatttcatttgcttttatgactgggctgactgtagactaatacgccgcattgatgtgaatgtcaaaaacctttattgggctgatagcggtgacctagttgcaatagcaagtgatacatcattctacatactgaagtacaacagagatgtcgttgcgtcttatctagaatctggaaaacctgtggatgaggaaggcgttgaagatgcttttgagctgcttcatgaggttaatgagcgagtgcggacagggatctgggttggagactgctttatttataacaattcatcatggcgcctgaactattgtgttggtggcgaggtcaccacgatgtatcacttggatcgccctatgtacttgttgggatatctagcgaatcaaagccgagtttatcttattgacaaggaattcaatgtcatggggtacacattacttcttagtttgattgagtacaagacacttgtgatgcgtggggatattgaacgtgcaaatgatattttaccatccataccaaaggcgcaatataataatgttgctcatttcttggagtcaagaggtatgctggaggaagcacttgagatagctactgatgctgattacaggtttgacctagctgtgcaacttggaaaattagaagttgcaaaggctatcgcgatggaagcgcaaagtgaatctaagtggaagcagttgggtgaactggctatgtccacaggcaagctagatatggcggaagagtgccttgtgcaagcgaaggacttaagtggcctgttgctactatattcatctcttggagatgctgagggaatcgagaagcttgcttctcaagcaaaggagcatggcaaaaacaatgttgctttcctctgtctctttatgcttggtaaattggaagattgcatacaattgctgatagacagcaatcgtatacctgaagctgcgttaatggcacgttcttatcttcccagcaaagtttctgagatagtagcaatatggagaaatgacctcagtaaagttaatccaaaagctgcagagtctctggcagatccttctgagtatccaaatttatttgaagactggcaggttgcacttactgtagaaaagaatgttgcttctcggagggtccattatcctcctgctgatgagtacttgaaccatgctgaaaagtcagacatgactcttgtggaagctttcaaaaggatgcaggtcattgaagatgaggaaacagaagatgcactagatgaaaatggagagcccgatgaagaggttttggaagagaacaaagtggaggagagcacagatgaagctgtcgaagttgatgctgatgagcctgaagagaccgttcttgtaaatgggaaagagggtgaggaacagtgggtgctaactgaacatgagtaa</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MPLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDY                    QSQTMVKSFEVSELPVRSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYI                    RCVAVHPTLPYVLSSSDDMLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFAS                    ASLDRTTKIWSLGSPDPNFTLDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQT                    KSCVQTLEGHTHNISAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWA                    VGYMKGSRRMVIGYDEGTIMIKMGREVPVASMDTSGKIIWAKHNEIQTVNIKTVGAGF                    EVTDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEFIIYTALAWRNRSFGSA                    LEFVWSSEGEYAIRESTSRIKIFSKSFQEKKTIRPTFSAERIFGGILLAMCSSDFICF                    YDWADCRLIRRIDVNVKNLYWADSGDLVAIASDTSFYILKYNRDVVASYLESGKPVDE                    EGVEDAFELLHEVNERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLG                    YLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDIERANDILPSIPKAQYNNVAH                    FLESRGMLEEALEIATDADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQLGELAMSTG                    KLDMAEECLVQAKDLSGLLLLYSSLGDAEGIEKLASQAKEHGKNNVAFLCLFMLGKLE                    DCIQLLIDSNRIPEAALMARSYLPSKVSEIVAIWRNDLSKVNPKAAESLADPSEYPNL                    FEDWQVALTVEKNVASRRVHYPPADEYLNHAEKSDMTLVEAFKRMQVIEDEETEDALD                    ENGEPDEEVLEENKVEESTDEAVEVDADEPEETVLVNGKEGEEQWVLTEHE</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
−
DNA = <dnaseqindica>8308..8327#7742..7853#7408..7552#7185..7291#6979..7072#6696..6892#6262..6333#6026..6140#5468..5584#5300..5391#5023..5199#4824..4898#4593..4733#3785..3973#3281..3346#3049..3199#2858..2926#2203..2351#1987..2118#1563..1888#1441..1477#665..718#479..541#335..355#178..180#gtcctttccttcctcccaccctcctcgtcgctcccccgccgagctcgcgatcggattcgcttcgcctccgcctccgcctccgcgtcgccgcgccgccgttgccgcggcggatctctagggtttagccccccccgcgcggcccggctcccccgctctgcccacgccgttgccgccaccatggtacgtacgcggatctgaactttggccagcgcgctctcgctgttccgatcaatccgctcgcccgttttttttttttgtgtgtgttgggaagtaattgggtgtggtttggggagagatctgatcaaatgttgttttctgcttgtgcttcctgcagccgctcaggttggagatcaaggtgcgccactggctcgggctcggcgagcccgattccgctagatctcggtttgttgctgtctcagttggtggttagttttgtgctgattttgtggttgttttgtctttgggatggtgtgattagaggaagtttgcgcaacggtcggagagggtcaagtcggtggatctgcaccccacggagccatggcaagtgacctgcatttctgagggttttagcacattttagcctgatttgagccgttcgtactaccattttgatgtgcttttgcttcattatttgattattaagctgtttttgcattggtgtaggatcctgtcgagtctttactccgggagcgtgtgcatctgggactatcagtcgcaggtaagagttctagttgcattttaggttcattgtttccccattaagcaagactaagactcaactacttttgaagtaaatatgaatattcaaaactgtactcatgctaattgaccgaagcatgattgtgcataaaattagggcttctgtttctataatctatatggtttcttattagttttgcatgtcttgagctcaaattttgctttacaacttaatcacatgacggatgaaggggtatatgctaagtagttttgtcattcatccttaaatcatgctttccagttagtacaaatcactatgggaggaacatagaagcatttctcaccacattattacatcttcacacttatgttatactcccactgaagtttaatgccatctgtggctaactgatccattatatgtaatatatattatttttggtggctgcaaagcctcagtgccttattccaatgtaatatgttatttttggtggccgtcaaagctttggtgccttactccaatgtaacatgtaagccttttacaattttgcattgacctataggatgatcggttgatgcctagtcttatatcatgaccatcattgtttggatttgaaccacatagaattgactctgcatttcaaatcagcgtattccatcacatgctcctgcaatcctgcataatctatacttagcgttccatttgattattaacatgttttccttggtgtatgtttgcagacaatggtgaagtcatttgaagtttcagaattgccaggtactcatctgcttatgttcacatgaaatgaaaatctgtcatagaggttgaattgatgctaacttgtatctgatcttaatttcagtgcggtcagcaaaatttatttcacggaaacaatgggttgtagctggtgcagacgatatgttcattcgtgtctacaactacaacacgatggacaaagttaaggtttttgaggctcatactgattatattagatgtgttgcagtccatccaacacttccatatgtgctttcatcatctgatgacatgttgataaaattgtgggactgggataaagggtggatgtgcactcaaatctttgagggacattcacactacgtgatgcaagttactttcaatccaaaggatactaacacttttgcaagtgcatctcttgaccgaactacaaaggtctgtttcacaatctcttatgcagtggatgttattcacaatatatggctttttatgaggtgatttgtgcactaatggttctaaaactgaaacaacagatatggagtttgggttctccggatccaaatttcacactcgatggacatcaaaagggtgtgaactgtgttgactacttcactggtggtgacaggccctatttgatcactggttctgatgactccactgcaaaggttttttttttctatccacttttgagtgttccaagtatccacgattctgtgcagtcctaagatggtgtggtcatggtgaaccaggtctgggattaccaaacgaagagctgtgttcagacacttgaaggacatacacacaacatttctgctgtttgtttccatcctgagcttcctataatcattactggatctgaagatggcacagttcgcatatggcattcgacaacttacaggttgctttcacagtttcacttgtgtttttgcttgttgatgtggactgtttcctagttctcattgtttgctattcaagtgctctctacgaaagaaacaacttgtaatttcctggttctcatttctggattctggatattttgctttttctcttggcaacctctcaagtcctgggttcaaaatttgatccaaaagtttttacatattttcttagaggaaattttccccaatatagctttttggtataattatctcataactcttaaacatattatgcatgggctattcttacatagaaaagctccaaatctatgttagacattggaaaagagggtagctgacagtgtaatctatgtaccattcggtctgtttttgtcattaatttatctgttcctttttcttatggtctggaatatttgttagttgttggcagctcactacttaatacttatgtcagttatgattgccacaatgttgaggtgttcttattttttaatttattttgtagacttgagaacacgctaaactatggtcttgaacgagtctgggctgttggatacatgaagggttcaagaaggtaaacagaagatcctttgcattctgcttttgtgttgcattgtaatcaattgcttttactactgttctgcgtcactcctcctttcaattttttaacaccattcgacattttatgatatgtaggatggtaattggttatgatgagggaactataatgataaaaatgggacgtgaagtacctgtggcaagcatggataccagtggaaaaatcatttgggcaaaacataacgagatacagactgtgaacatcaaaactgttggtgcaggctttgaggtcagttggcctgtttgcaaacagaatcgatcaatcaaacagagaagctgatctcatgccctactatgttttcttattcaggttacagatggggaaagattgccattggctgttaaagaattaggaagttgtgatctttacccacaggtatttttgaatgtcacaactcacaacgctctttatattttactcctgatactgttagcagtgctgcagtaacctatgtgtttgaacttctgcataaatagcatccattaatctcacatcagcatatatagtggttatcatccatgcctgcagcttgtgaattgtgatgacttgtaaatggttatgctaataagcttagtgaaagaacatatggaacttgtagttcaataggtgacattgtccaattagtgttaattgctttgattgatagttttcacacaaccactacctctattttgtgttccttgtgattccttgatgtgatattagactgagatggctacaacatttcttttctttctactaggtaatgttagttgtttgtcatatcttgaatagtattcaatcttactatgtgtcatctttttgtttggtcagagcttaaagcataaccccaatggaagatttgtcgtagtttgtggagatggtgaattcataatttatactgcattggcttggaggaataggtcatttggatctgcattggagtttgtttggtcatcagaaggagagtatgctatcagggaaagtacatcaagaataaagattttcagtaaatcatttcaggtttggcccacattgattgtagcctttccttttatgaatttgatcagtaaaactgtagtgtttcatttcttcaatcaccactctggagaatgcaccatcttcacctgtttatcactttgcctttaaccgtgaatttacaccttgcaatattcaattgagatgtctaatgtactattgtttggctaactattgagttaacttttatttaatcaataaaggtttctggttaacacgagcgttcattcaatcaaaagttttatgttgtgcattttaatgtctgttcatgattcatcaatcatcatgtttggtgaaaggaaattacatactgatttaggtttgcatctcattggacctagtcacctagatgacagtttctttttcttacactatatatcttacttcctgacaatctgttgtcattcagccaatcagcctacatgaatactccatttatgtttagctataacattgatctagaaacaatttaagcgtaggttgatttaattagttactatgttctaaggaccttttattaatgaatttggcaaagaattgcacatcatattctgttggcatttatcaatattgtatcttctggtttgaatgatccaatatgcaggagaagaaaactattcgccctacattttcagctgaacgtatttttggtggaatattattggcgatgtgttccagtgatttcatttgcttttatgactgggctgactgtagactaatacgccgcattgatgtgaatgtcaaagtgagtcaaatattatctattgatatttatagattgatacttttaacgaatttcatactgaaataactagttttgtcactgtatttttagaacctttattgggctgatagcggtgacctagttgcaatagcaagtgatacatcattctacatactgaagtacaacgtaagttattgtattatctaaatgttcattatgttatttcttttctcctcttgaatgtgttattgcgtgaaagttctttttttaccatggcatgaagttatgtttgtaatttgtgttcctacagagagatgtcgttgcgtcttatctagaatctggaaaacctgtggatgaggaaggcgttgaagatgcttttgagctgcttcatgaggttaatgagcgagtgcggacagggatctgggttggagactgctttatttataacaattcatcatggcgcctgaactattgtgttggtggcgaggtatatattgtgtgctccatgcaagaatttttattttgttaatgtattttctattgtagtattttgtgcactacaaatttatcccgttgtacatttacaggtcaccacgatgtatcacttggatcgccctatgtacttgttgggatatctagcgaatcaaagccgagtttatcttattgacaaggaattcaagtgtgttttcttgataatactgcctgcttattgtctggtgttgaattcttgaactaacatatttttcttgttgcagtgtcatggggtacacattacttcttagtttgattgagtacaagacacttgtgatgcgtggggatattgaacgtgcaaatgatattttaccatccataccaaaggcgcaatataataagttagttgctgacttttgatccaaaacaatgagtttcttttattttggtacctgtttctctttgaacctgttgatttggtttcttaataattttgttccttttttaaaagtaacaaaacaatgatagatggaagcgtgaaaatacatttatatgctaaattacaattacatttcaatagctatcatgatgtgccttattgaatgactgttatgtagcacatcacacctaaaatagattcaactgttaggagtattggcatctagttttttgaaacaaaaatacatatattgtttctactctatcttcattgtagtcgtgtaaaggagtactgattaatggaagtgccaaataacaaaatcataaaaaatttcctagcagtgcattttgtcctgttgtgttttgatggtttcttactcctcccattacttttcatatggcagtgttgctcatttcttggagtcaagaggtatgctggaggaagcacttgagatagctactgatgctgattacaggtttgacctagctgtgcaacttggaaaattagaagttgcaaaggtacagaacatgttgtattgtgtttttgttccacattattgaaataatgttctgaaaggtcttccatgctgtgaagttcattgctaataaacagaatggattctggacattttctgtgcaggctatcgcgatggaagcgcaaagtgaatctaagtggaagcagttgggtgaactggctatgtccacaggcaaggttagttcataaatcttgtgaaagacttttggtatatgctttcaaaagtaatgacagtgccatagtatctaggtgcttgttgtcaaggtgctagattacctggagtgcattattgagttcgaggttttgtcctctttagacttagaggaaaaaccaaactagacatgcttttggaaatcagctgagacttgtcctttatcctttcacgatctagtttctgtgcatagaaatatggaaatggcaatagttgacactactacactagttcatattgacatcatttgatgacaattaatgcaaatcatttatattctgtttgttaccttgttttctgactttaaatcatttcacaacttcaacagctagatatggcggaagagtgccttgtgcaagcgaaggacttaagtggcctgttgctactatattcatctcttggagatgctgagggaatcgagaagcttgcttctcaagcaaaggagcatggcaaaaacaatgttgctttcctctgtctctttatgcttggtaaattggaagattgcatacaattgctgatagacaggtacatgtacatcctgtttgctgttatgaactccccattgtagtaaatcatttttcaaagctaaacctcatctatgtattatacagcaatcgtatacctgaagctgcgttaatggcacgttcttatcttcccagcaaagtttctgagatagtagcaatatggagaaatgacctcagtaaagtaatttcttaatcttctgctcttatctttgcattgaaaagtgtgcttccatccagaaaacattttctgttattgttctggttttatctattcatatgttccttctgtacaggttaatccaaaagctgcagagtctctggcagatccttctgagtatccaaatttatttgaagactggcaggttgcacttactgtagaaaagaatgttgcttctcggaggtaaaaattaccagagaagctgctttttttattattaccatgtaacgctaccaattcttttggaagaaactattgtataaacaaacctggtacaatgataaggtctctttcttcagggtccattatcctcctgctgatgagtacttgaaccatgctgaaaagtcagacatgactcttgtggaagctttcaaaaggatgcaggtcattgaagatgaggaaacagaagatgcactagatgaaaatggagagcccgatgaagaggtattgcgtgtggagtgtgcattttgctatccatgttcaacttattatgaaatttttcaactttcctttctagtgttgatgaccgtgtcactcaaccattgttccgtttatcctttctccttgattaaatgtctgtagtgctatattcatcatcatgttctgaaaataataacataggattcctcataggttttggaagagaacaaagtggaggagagcacagatgaagctgtcgaagttgatgctgatgagcctgaagagaccgttcttgtaaatgggaaagagggtgaggaacagtggggtacgaacaatgaaggaacttcgtcagcctaaaagaattgtttggcaagtgtaaaaacccaaattttgtctgcggtgattcactagctttgcccccaaattataggactgttgaacctttctagtacttcagtttttgaaaaagtaaatctgacccctttggaattatagaccattaccaacagttagcaaattgaaatatagatatgcattatgagatgagttctattattatattttttttaaaaaaaaatattctgtatgttctgctgttttatttgctcctatatagcgtatattggctgctaagacgctaagacaaggatattcatccatccaccatttgggcctgatatgtagggtcaagcttatagctagcttatttttttgttcttaaaccagtttttttattctaattattgaactgaatttattcttttcttttctccttgcagtgctaactgaacatgagtaaggaccaaggatgctgtgccgttttgcattggtgatgctgtgccgtttgagctttgatcttatcatatccttcaactgaactccaaactcaagacatggaagcatgcttgtccaatggtatcaatccagaccggcttcttttttgctgcaatataggtgattctttcgtcctgcaacattttcatacccactcttcacgtcctgaaatcagtgggtttgggtgcagagctggttgtaacgaagggttttcttaataatttctatagagatgtgtagtatatgccacattaccatagccatcgcatgtcttctaggagatcaaagttttcgttggccatccactgtaatttcatgttattggacaaagtttacatgtagcatatgattgtggtgttaaaagctttccgtgtataattctctgttggtgctttgccgttgaacactgctgttgaaaatgctgattccttggaagagttaatctatcatttc</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063314.1 RefSeq:Os06g0143900]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 6]]
 
−
[[Category:Chromosome 6]]
 

Latest revision as of 08:46, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information