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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]] |
| − | GeneName = Os06g0237300|
| |
| − | Description = Similar to LIM domain protein WLIM-1|
| |
| − | Version = NM_001063783.1 GI:115467297 GeneID:4340605|
| |
| − | Length = 6036 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os06g0237300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
| |
| − | AP = Chromosome 6:7132969..7139004|
| |
| − | CDS = 7133132..7136671,7137285..7137371,7137508..7137551,7137679..7137775,7138613..7138756<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008399:7132969..7139004
| |
| − | source=RiceChromosome06
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008399:7132969..7139004
| |
| − | source=RiceChromosome06
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcggcggcggcgtggggcggcacgacgcagaagtgcgactcgtgcgggaggacggtctaccccgtcgaggagctcgccgccgacggccgcgtctaccaccgcccgtgcttccgctgcacccactgcaaggccaccctccagtttagtaactattcttctgtcgaaggtgtcctatattgcaaacctcactatgaccagatattgaaatcaaccggcagtttggagaaaagttttgaagggacatcaaaatcagctaaagcagaaaaatcgaatggaaacaaggggcaaccgaacagattctctagcatgtttgttggcacacaagacaagtgcgtagtttgtaacaagactgtgtaccctcttgaaaaggttaatcttaacgggagctcatatcataaatcatgcttccgttgcacccatggaggctgtactcttagcccatccaacaatgtcacacatgaaggcaaactttattgcaagacccatcactctcaattatttatggttaagggaaacttcagcaattttgaggatagtactccaaatgcaaaagtggatatcgagaagcaaccagaacatgaagatgctaccaagaatccaggaggcccaggtcaaggtgatgggctcactgagaaacctttagaaagtgaactcactcctgagaaaccgtcacaagacgatattgtggctgaaaagcaatcacaaagtagcgttgatgtcccaaaacaatcagaaagcagcacaacagttcagaggtcagaagaaggggaaagggttaccaagggtgagtcaaatagtcatgtagtcagcaagaagccattggaaagcagtgtagaaaagccattccagagcagtgcagttaacttacagccatcaggaagtagtgcagccgtaagaaaaccatggcagcgcaatcttcccacagataagccattgctgagtaacacaaccactgaaaagtcaactccaagcagtgctgccattgaggaatcattgccaagtaatggggttgatgcaaaacagccagaaagcagcactgccagcacagtggtaaaaaggccatggcaacggagggtagctacggagaatctaccgcagagcatttcgccatcagataagccatcatcaaccagtgcagatgatgtgaagccatcagaaaacagcaaattgatcagaaaaccatggcaacgtgctgtggctgctgaggcgcagatacagaacagtggaccaactgagaagtcatcattgacaaatgatacaaagccatcagaaagcaccacatcaattaaaaggccatgggagcacaaagtggtcaatgagaagccactgcagaacaatatagacacggagaagccactgcagaacaatacagacactgagaagtcatctagcagtgctatcgatgtgaagctggcagaaaccagtacaacacccactgtgccacaggaacacagtggaatcacggagaaaccttcacagaccagtgcagatgatgtaaagccatcagagagcactgcagcagtggttaaaaagcaatggcaacgtaacatcggattccagaaacagccccagagcagtgtaactgatgcaaagacacctgaaagcaggggaatgggcaaaagattgtggcagcgcaatgttccaactgaaaagcaatcgcaaagcggtgcgtcggttgtgacaccatcacaagttagtgtggctagcaccaacccgctccaaagcagcgtggttgtgaaaaagccatggcaaagaagcgtgtctagagaaaaagagccagagaaggatatatctagcaacaaaccgttacaaaaccgtgtacttgctgaagaagcagagaaaaccaatgtgactgctgataacaaatcacagatcattcaagataaaaagaacaatggtgctaccacagagaattcatcacaaataagtgaaagtgccaaaaaactaccacttactgcaaataaatcgcaagctgatacttccacagaaaaattgtcagaaagtgacatacttgctgtagcatcatctcagatcactgaaccatctaagaagccatcagaaaacactgctgaaaatgagaagccatcacagactgatattgctactgacgagctacccctgacccaaagtgtagaagccatgtcagaaccatctccaagtgatgcagctcatcaggaaatctccgagagggagatactgacagataaattaccagaaagtaccatggctgttgagaagctatctcaaactgctactctaaccgaaaagccatctaaagaagatgctgcagagaagctaccgcaaaccaatgaaccttctgagcagccacacgagagtgaagagactgctgagaagccacttcaaaatgaagctaatgctgaaagcacaacaaaacaaagtgatctcagtcttgagaagccacctcaggttgatgccaatgttgggaatcctaccgagcctgaaagtgatgccacttctggtgtgaactcatcagatgctcaaatcaggccaactgctgagcagttagtaggacctcaaggcattgtatctgccgagaagacatctgaccagatattagaagctaacaccgatccagctgctgaccagtcatcagagtcccaagatgttgcacctgctaaagttgcaacggagcaaccattagaaaatcaaaaggctgcagcttcagagcagccattggaacctcaacacgaagcatatgaagagaatccacaagagcataatagtgatgcaactgccaaggagtcatcagaacctgaaagagatactgcttctgatcagttggctgagcagccatcagaatctcgaactgcaggtgagaaggcaacactgcgtgaaagtgatgtggttaccgaggatccagcagaacctcaaattgatgcagctgctgaaaggtcagctgaggtgttatcagaatctcaaactggagttgagacaccagtgctgcatcaaagtgatagaactaacgaggttccatcagaacctcaaactgatgaagcttctgacaagtcaactgagcagccattggagcctgaaaatgatgcatctgtcgaggatgagaagccaccggaaatcgaaagtgatgatgtgcatgataaaccatcagaaagcaccccagatactgaaaccctgcctcataacactccaaagagtagcataagcattagcgaagctgcagacggcaacgtttctgaggaggcaccacctcagagcagtgcatccatagaaacgccatcagaaagtgccatagctgtcgaggaaccaaaacacgacgacgaggccagcataaagccatccgaagacagcagtgctcttgaggagccgccgcaggacgatagcgccagcgtggagccatcagagaacactataactcttgagaaggcatcagaggaagatgagggaagtgtaaagccatcagaaggcaatgatgctcttgagaaaacattggaggaggatgaggcgagtgccaagctaccagaagacagtacgacctttgagaagccatcggagaaagatgatgctggcaccaagcagacagaggaccctgtaactcttgagaaggaaccagaggaagacaagggaagtgtggagccaacacaggacaatgctggtcttgagaaaccgttggaggaagacgaggcgagtgcgaagccatcagaggacagtgtggttcttgataagccatcagtggaagatgatgacagcgccaagccatcagaggatagcatggaccttgaaaagccagaggctcacaaaccatcagaggaagaagatggcgcgaccaagtcatcaccggaggatgctgccgttgaggaggcgccattgcaaggtgacacagaaacagccactgacaaaccctcactagaagcagacaccacagaaactgcctga</cdnaseq>|
| |
| − | AA = <aaseq>MAAAAWGGTTQKCDSCGRTVYPVEELAADGRVYHRPCFRCTHCK ATLQFSNYSSVEGVLYCKPHYDQILKSTGSLEKSFEGTSKSAKAEKSNGNKGQPNRFS SMFVGTQDKCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYC KTHHSQLFMVKGNFSNFEDSTPNAKVDIEKQPEHEDATKNPGGPGQGDGLTEKPLESE LTPEKPSQDDIVAEKQSQSSVDVPKQSESSTTVQRSEEGERVTKGESNSHVVSKKPLE SSVEKPFQSSAVNLQPSGSSAAVRKPWQRNLPTDKPLLSNTTTEKSTPSSAAIEESLP SNGVDAKQPESSTASTVVKRPWQRRVATENLPQSISPSDKPSSTSADDVKPSENSKLI RKPWQRAVAAEAQIQNSGPTEKSSLTNDTKPSESTTSIKRPWEHKVVNEKPLQNNIDT EKPLQNNTDTEKSSSSAIDVKLAETSTTPTVPQEHSGITEKPSQTSADDVKPSESTAA VVKKQWQRNIGFQKQPQSSVTDAKTPESRGMGKRLWQRNVPTEKQSQSGASVVTPSQV SVASTNPLQSSVVVKKPWQRSVSREKEPEKDISSNKPLQNRVLAEEAEKTNVTADNKS QIIQDKKNNGATTENSSQISESAKKLPLTANKSQADTSTEKLSESDILAVASSQITEP SKKPSENTAENEKPSQTDIATDELPLTQSVEAMSEPSPSDAAHQEISEREILTDKLPE STMAVEKLSQTATLTEKPSKEDAAEKLPQTNEPSEQPHESEETAEKPLQNEANAESTT KQSDLSLEKPPQVDANVGNPTEPESDATSGVNSSDAQIRPTAEQLVGPQGIVSAEKTS DQILEANTDPAADQSSESQDVAPAKVATEQPLENQKAAASEQPLEPQHEAYEENPQEH NSDATAKESSEPERDTASDQLAEQPSESRTAGEKATLRESDVVTEDPAEPQIDAAAER SAEVLSESQTGVETPVLHQSDRTNEVPSEPQTDEASDKSTEQPLEPENDASVEDEKPP EIESDDVHDKPSESTPDTETLPHNTPKSSISISEAADGNVSEEAPPQSSASIETPSES AIAVEEPKHDDEASIKPSEDSSALEEPPQDDSASVEPSENTITLEKASEEDEGSVKPS EGNDALEKTLEEDEASAKLPEDSTTFEKPSEKDDAGTKQTEDPVTLEKEPEEDKGSVE PTQDNAGLEKPLEEDEASAKPSEDSVVLDKPSVEDDDSAKPSEDSMDLEKPEAHKPSE EEDGATKSSPEDAAVEEAPLQGDTETATDKPSLEADTTETA</aaseq>|
| |
| − | DNA = <dnaseqindica>2334..5873#1634..1720#1454..1497#1230..1326#249..392#gctgccgttccccgttattcgccaacgcttccctccacccgccccctccccaagctgagctgtgctgccgctgctttcgccttcactaatcatcatcgcctcctcctcctccttctcctcttccccaccaccttcctccccacacacacacaacctcgcgcgcgcgcggcgagaacgagaagcatccagggcggcgcggaggcggaggcggaggcggaggtggaggggggggggggggggaagccgggatggcggcggcggcgtggggcggcacgacgcagaagtgcgactcgtgcgggaggacggtctaccccgtcgaggagctcgccgccgacggccgcgtctaccaccgcccgtgcttccgctgcacccactgcaaggccaccctccaggtcccccgtcccctactctgctcgatccatccattaattaccagattttttttttgtactggctttatgccttgtttttgttaatctgggtcgatgctattattgcgagtactatcggcttcctgaaatcatatccatcttggaatgctttagttgttgttgctgtactgtatggcctgcttttttctttttctttttttcttttctcgagaccagtcgaagatgggagttaggttgcatgctcatttcaataatcaagttgcgactgtgattgactaactggataaccaatcactttgctatccgtttatgtgataacgaacccacgaagcatcagtaaatttgcctaaccacggtttatttgtttaatccatcttcgacgcaatttcttggcgtcttagtaaatatcccaattatttttcttgttattgtggcatgagggatggactggaatggatagggtagcaaataaatgtttgttttttttggtacaactgttgtctgttcatcatattcctgaactgactggttcacctattaaatatagtgctggctgatttgctaggttggtattatgctgttggtgagtgccgtatgattagcctgccttttgaaagtaataacatggaattaatcatgctgtcctcaatgcatcatggatgtaaatgcagctagcatgtttttttcttggttttggtatatttctgttgagaataataatgatcacactaaatctttatgcctcatcatactagctagaactacacctatcttgttctgtttgcaactaagctacatatatgaaaccagctaatatttttttattatcttttacagtttagtaactattcttctgtcgaaggtgtcctatattgcaaacctcactatgaccagatattgaaatcaaccggcagtttggagaaaagttttgaaggtactgaagagaaaactaaatccactgggcttgatgccttaattattgctagtgtctttacctcgaaattgttgctattgtctcatgatttttaggcctgccctaaattttgactatattatgccagggacatcaaaatcagctaaagcagaaaaatcgaatggaaacaaggtatcgtaatatatttctaagatatgctcttttatgtttttgaagcacgtccctagtatctaaattgtttggcagctttgatgtagaggacataacattcatgtccacttcctcttttatgttatccaaactgcaggggcaaccgaacagattctctagcatgtttgttggcacacaagacaagtgcgtagtttgtaacaagactgtgtaccctcttgaaaaggtcagtattatactactgtattatttaatcttcccctgttcaacttcaataaatgttataaaccaacagctgttctcctgttcagggaattaatcatgtaagcgctcttctatttatgatatggttgacaattgagcattgtagttggcctcatcatcttatgtgctccatcacaagactaattcagtggcaactgctaatgcgataaatcttatcgtgcttgttattagaatatatccacaataattagaattactacatctgataaagttttccagttgtaattaagtatcaataattttcttctcacaagcaaaaagagtggcaagctaagccaaatggagacttctataccctttcctaaaatactgaattgctgtcaaattttcacaatgttgtagaatcagttcattgacctattttttgacaatatttaagaacacatttattacatgccaatatgctatatttttagcaatatttgggcgttatatacttttttccctcatactactgcattagtcattttctgtggctaacttatgtaagctatagaagaatgcaatgttaggataaccgataagaaatgattaattcaattaatattttgcaggttaatcttaacgggagctcatatcataaatcatgcttccgttgcacccatggaggctgtactcttagcccatccaacaatgtcacacatgaaggcaaactttattgcaagacccatcactctcaattatttatggttaagggaaacttcagcaattttgaggatagtactccaaatgcaaaagtggatatcgagaagcaaccagaacatgaagatgctaccaagaatccaggaggcccaggtcaaggtgatgggctcactgagaaacctttagaaagtgaactcactcctgagaaaccgtcacaagacgatattgtggctgaaaagcaatcacaaagtagcgttgatgtcccaaaacaatcagaaagcagcacaacagttcagaggtcagaagaaggggaaagggttaccaagggtgagtcaaatagtcatgtagtcagcaagaagccattggaaagcagtgtagaaaagccattccagagcagtgcagttaacttacagccatcaggaagtagtgcagccgtaagaaaaccatggcagcgcaatcttcccacagataagccattgctgagtaacacaaccactgaaaagtcaactccaagcagtgctgccattgaggaatcattgccaagtaatggggttgatgcaaaacagccagaaagcagcactgccagcacagtggtaaaaaggccatggcaacggagggtagctacggagaatctaccgcagagcatttcgccatcagataagccatcatcaaccagtgcagatgatgtgaagccatcagaaaacagcaaattgatcagaaaaccatggcaacgtgctgtggctgctgaggcgcagatacagaacagtggaccaactgagaagtcatcattgacaaatgatacaaagccatcagaaagcaccacatcaattaaaaggccatgggagcacaaagtggtcaatgagaagccactgcagaacaatatagacacggagaagccactgcagaacaatacagacactgagaagtcatctagcagtgctatcgatgtgaagctggcagaaaccagtacaacacccactgtgccacaggaacacagtggaatcacggagaaaccttcacagaccagtgcagatgatgtaaagccatcagagagcactgcagcagtggttaaaaagcaatggcaacgtaacatcggattccagaaacagccccagagcagtgtaactgatgcaaagacacctgaaagcaggggaatgggcaaaagattgtggcagcgcaatgttccaactgaaaagcaatcgcaaagcggtgcgtcggttgtgacaccatcacaagttagtgtggctagcaccaacccgctccaaagcagcgtggttgtgaaaaagccatggcaaagaagcgtgtctagagaaaaagagccagagaaggatatatctagcaacaaaccgttacaaaaccgtgtacttgctgaagaagcagagaaaaccaatgtgactgctgataacaaatcacagatcattcaagataaaaagaacaatggtgctaccacagagaattcatcacaaataagtgaaagtgccaaaaaactaccacttactgcaaataaatcgcaagctgatacttccacagaaaaattgtcagaaagtgacatacttgctgtagcatcatctcagatcactgaaccatctaagaagccatcagaaaacactgctgaaaatgagaagccatcacagactgatattgctactgacgagctacccctgacccaaagtgtagaagccatgtcagaaccatctccaagtgatgcagctcatcaggaaatctccgagagggagatactgacagataaattaccagaaagtaccatggctgttgagaagctatctcaaactgctactctaaccgaaaagccatctaaagaagatgctgcagagaagctaccgcaaaccaatgaaccttctgagcagccacacgagagtgaagagactgctgagaagccacttcaaaatgaagctaatgctgaaagcacaacaaaacaaagtgatctcagtcttgagaagccacctcaggttgatgccaatgttgggaatcctaccgagcctgaaagtgatgccacttctggtgtgaactcatcagatgctcaaatcaggccaactgctgagcagttagtaggacctcaaggcattgtatctgccgagaagacatctgaccagatattagaagctaacaccgatccagctgctgaccagtcatcagagtcccaagatgttgcacctgctaaagttgcaacggagcaaccattagaaaatcaaaaggctgcagcttcagagcagccattggaacctcaacacgaagcatatgaagagaatccacaagagcataatagtgatgcaactgccaaggagtcatcagaacctgaaagagatactgcttctgatcagttggctgagcagccatcagaatctcgaactgcaggtgagaaggcaacactgcgtgaaagtgatgtggttaccgaggatccagcagaacctcaaattgatgcagctgctgaaaggtcagctgaggtgttatcagaatctcaaactggagttgagacaccagtgctgcatcaaagtgatagaactaacgaggttccatcagaacctcaaactgatgaagcttctgacaagtcaactgagcagccattggagcctgaaaatgatgcatctgtcgaggatgagaagccaccggaaatcgaaagtgatgatgtgcatgataaaccatcagaaagcaccccagatactgaaaccctgcctcataacactccaaagagtagcataagcattagcgaagctgcagacggcaacgtttctgaggaggcaccacctcagagcagtgcatccatagaaacgccatcagaaagtgccatagctgtcgaggaaccaaaacacgacgacgaggccagcataaagccatccgaagacagcagtgctcttgaggagccgccgcaggacgatagcgccagcgtggagccatcagagaacactataactcttgagaaggcatcagaggaagatgagggaagtgtaaagccatcagaaggcaatgatgctcttgagaaaacattggaggaggatgaggcgagtgccaagctaccagaagacagtacgacctttgagaagccatcggagaaagatgatgctggcaccaagcagacagaggaccctgtaactcttgagaaggaaccagaggaagacaagggaagtgtggagccaacacaggacaatgctggtcttgagaaaccgttggaggaagacgaggcgagtgcgaagccatcagaggacagtgtggttcttgataagccatcagtggaagatgatgacagcgccaagccatcagaggatagcatggaccttgaaaagccagaggctcacaaaccatcagaggaagaagatggcgcgaccaagtcatcaccggaggatgctgccgttgaggaggcgccattgcaaggtgacacagaaacagccactgacaaaccctcactagaagcagacaccacagaaactgcctgagctggttacagttagttagcaacagtacacagtttttaacccagatgggtggatactactgttgatactttggtttgccattttgcttgttttcttgttttgtacaatgcttgagttgtaaaatttgagggaaaacagaaaaggaactataggtattgatttg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063783.1 RefSeq:Os06g0237300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 6]]
| |
| − | [[Category:Chromosome 6]]
| |
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Annotated Information
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Structured Information
