Difference between revisions of "Os10g0429500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0429500| Description = TRAF-like domain containing protein| Version = NM_001189237.1 GI:297727604 GeneID:9271421| Length = 6718 bp| Defini...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os10g0429500|
 
−
Description = TRAF-like domain containing protein|
 
−
Version = NM_001189237.1 GI:297727604 GeneID:9271421|
 
−
Length = 6718 bp|
 
−
Definition = Oryza sativa Japonica Group Os10g0429500, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
+
Please input expression information here.
−
AP = Chromosome 10:15728848..15735565|
+
 
−
CDS = 15728848..15729186,15729225..15729924,15731210..15731505,15731532..15732002,15732067..15732378<br>,15733146..15733867,15734283..15734565,15734797..15735028,15735327..15735565<br>|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008403:15728848..15735565
+
 
−
source=RiceChromosome10
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008403:15728848..15735565
+
 
−
source=RiceChromosome10
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atggcgtccaccgctggcggctgtaagcattcgcgttccgcctccgccatcgtcgcaggcgccgcgagcgggtaccatctcctcaagatcgacggctactcgcgcatcaagggcctacccaccggcgaggccctcaaatcttgcgccttcaccgtggggggatatcgctggcgcatccattgctaccccaacggcagcaaatcagattactcggatttcatatccctgtttcttcatctcgacgacggacaagtcaccaagcaggtgaaagcgcagtacctatttcgtttcttggacgagttggatgacaagccgccgccttctcttacctcagagcaattcatcaagcgggaagcattggagaaatcggagcatctgaagaaagattctttcaccgtgcggtgcgacatcatcgtcaccaccgggttccgtgcggaggaggagacggccgaggcgcaaagaccacggaaggcgaacttcgtctccgtgcctccgtccgatctgcagcggcatctgggggatcttctccacaacgagaagggcgccgacgtggtgttcgaggccggcggcgagactttcgccgctcaccggtgcgtgctcgcggcgcggtcaccggtcttcagcgcggagctgtttggctcgatgaaggagagcgacgccgcgggtgtcgtccgcatcgacgacatggaggctcaggtgttcaaggcgctgctccgcttcgtgtacaccgactcgcttccggagacggaagaggaggagcaagacaccatggctcagcatctgctcgtcgcggcggacaggtacgccatggagaggctcaagctcatctgcgaggacatgctgtgcaagtacattgatgtgggcacggtgacgaccatcctgacgctggctgagcaacaccactgcgaagggctaaagaaggcatgctttgatttcctcagctccgcggtgaatctgaaagcagttgcttctggcgacggcatcgaggatctgagtaaaagctgcccatctcttatgaaggagttgattgccatgctcgacggcatttggatggatcgattcgtcggcccatccgtccccaacccaccaccagcgcaagcagccgtgctcggtcgtcgacggctccacgcgcggtcgccgtggctggaatcgttgtgccctactgctgagcctcgtccggtggtcgtcgtggtcagcctggggctgttaggcacgcggagaaatcgaccactcgtcacgggagctgctgaaaaggcgaatcgaggccggagaaaggggattctctggcggagttaccatcaagccaggcggaagtcggggagcgctgccggtgttgctctgcagctttggccgcatgcggctgtactcggtggagcgctctcgggtgtcacagtgtcgtcaagattcggcagagttggaagctttcttctcgcctccggcctcctatttgaggcctccttctccgggtggacaatgggcaccaggggaacaaagcggaagagaggggaggacatccatccgtcgactgcagccaaggggcaggctgtgcctttggcgttcgccgcaccggctcctcacggactgctcatcaatctggattcggggacggggtcgagcgcctctggcaaatctgacgccagctctgcccctccttgtgacaatgacatcaatgtggccgcccgcttcctaacagccgtttgtgcgacctccccaaaaggcgttcgctctttcgtccgtcgtgtgtcgccggcgacggttgttcggtccctcgatttggacctgatccggcccatctcgccacaaaagatggcggagggtaaaatccgatggagcgacgatgaaattggcatatttcttgaggcatgcttggaggagttgtccgcaatgaccataacatccacttgtccaaagccgcaaggctacaagaacctcatacagaagatgaaggagagaatcggaagaaacctcaccaaggatcaggtgaagtacacatggcgtcaatgtcgtaaaaggtggatgctttggacgtggctggaatcaaaggctaccggcattggccgtgacccgataactcaagccattgttgctgacgacgattggtgggaagacaaggaccagaaaaaggacggagctcgtgtcttcaaagattcccctctcaagcacatcaaccttcactgtgctattttttcggggtgcacagtggtagggaaccactctgctattgcaggcgcagcaccagcacctcctcagcagccaactccaaggcccaacatcaatatctcacagctgctagctcaacaacaaaacattgcgactccaggagtttcaagtgcaggaaaaggcaagaggctagcagatgaagctggcacttcgaggggatcggcttcaaagaagagtcgaagtgactcagccggtgatgccctgcaccggctagctgatttgcgagtggagtcgatggagagctgttcccggaaggtggaagaggacagggctagaagtgcagcagcttgcatccagttggtggtagctgatggacataacccatggagtgatttattctttatggcactggatgtatttgagcgtgcttattggcgtcaatggttcattgattactgccctacacccgagtcacggtcccattacatagtacagacatggcaaaagcaatttggcggaaaaggagctggtggccaaggaggtggacagcctggatacgaaggaggaactgggcagcagcgttatggtgtaggagcacccccgccaactggccagcagggttatggtggaggagtacccccgccaacttgttcaggaggtcatacagggtttggaggttggaatcacacaatgagcgacggttcatcgtggagttcggatggtactgaagggcaatacacgagcgatgaggatgacgctattattgcaatgatgcaagagattttagctgctcctccaagagctcctcgtcgtgtcccaacccaatttggaataacttggatgctagagacaatggcgaatcctgcacagtgccgtgcgattttccgtttaacggaatatcagatatacactctacatggaattttggaaaatgccccttacaacctgcatgggagtaatgattttgctgtaggtgctgttgacggcacacacattccggtcactgttggtgtggatagtgccatagaacacatgaatcgccatgacgagacaacaaaaaatgtcctaacaattgttggattcgatggtagagttatatttgccgatgccggatggccaggatcagtgcatgacaatcgagtcctaaacgaagctattgactcttatccagaggagtttccaagactaccttttcgcataccgtacaacccatataagaatgtccagagcgacataatattggcagcgttttgtttgcacaacttccgaatcgacagcaagcaaaatgactaccaggccaataaccctctgtataatggtaatcctatagcaccaatggcaccccccttctccaatatgtattacgccggcaatagcacacaagcgatgaacgcatactgtgatgccattgccaattcggtggagaacctgtag</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MASTAGGCKHSRSASAIVAGAASGYHLLKIDGYSRIKGLPTGEA                    LKSCAFTVGGYRWRIHCYPNGSKSDYSDFISLFLHLDDGQVTKQVKAQYLFRFLDELD                    DKPPPSLTSEQFIKREALEKSEHLKKDSFTVRCDIIVTTGFRAEEETAEAQRPRKANF                    VSVPPSDLQRHLGDLLHNEKGADVVFEAGGETFAAHRCVLAARSPVFSAELFGSMKES                    DAAGVVRIDDMEAQVFKALLRFVYTDSLPETEEEEQDTMAQHLLVAADRYAMERLKLI                    CEDMLCKYIDVGTVTTILTLAEQHHCEGLKKACFDFLSSAVNLKAVASGDGIEDLSKS                    CPSLMKELIAMLDGIWMDRFVGPSVPNPPPAQAAVLGRRRLHARSPWLESLCPTAEPR                    PVVVVVSLGLLGTRRNRPLVTGAAEKANRGRRKGILWRSYHQARRKSGSAAGVALQLW                    PHAAVLGGALSGVTVSSRFGRVGSFLLASGLLFEASFSGWTMGTRGTKRKRGEDIHPS                    TAAKGQAVPLAFAAPAPHGLLINLDSGTGSSASGKSDASSAPPCDNDINVAARFLTAV                    CATSPKGVRSFVRRVSPATVVRSLDLDLIRPISPQKMAEGKIRWSDDEIGIFLEACLE                    ELSAMTITSTCPKPQGYKNLIQKMKERIGRNLTKDQVKYTWRQCRKRWMLWTWLESKA                    TGIGRDPITQAIVADDDWWEDKDQKKDGARVFKDSPLKHINLHCAIFSGCTVVGNHSA                    IAGAAPAPPQQPTPRPNINISQLLAQQQNIATPGVSSAGKGKRLADEAGTSRGSASKK                    SRSDSAGDALHRLADLRVESMESCSRKVEEDRARSAAACIQLVVADGHNPWSDLFFMA                    LDVFERAYWRQWFIDYCPTPESRSHYIVQTWQKQFGGKGAGGQGGGQPGYEGGTGQQR                    YGVGAPPPTGQQGYGGGVPPPTCSGGHTGFGGWNHTMSDGSSWSSDGTEGQYTSDEDD                    AIIAMMQEILAAPPRAPRRVPTQFGITWMLETMANPAQCRAIFRLTEYQIYTLHGILE                    NAPYNLHGSNDFAVGAVDGTHIPVTVGVDSAIEHMNRHDETTKNVLTIVGFDGRVIFA                    DAGWPGSVHDNRVLNEAIDSYPEEFPRLPFRIPYNPYKNVQSDIILAAFCLHNFRIDS                    KQNDYQANNPLYNGNPIAPMAPPFSNMYYAGNSTQAMNAYCDAIANSVENL</aaseq>|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
−
DNA = <dnaseqindica>1..339#378..1077#2363..2658#2685..3155#3220..3531#4299..5020#5436..5718#5950..6181#6480..6718#atggcgtccaccgctggcggctgtaagcattcgcgttccgcctccgccatcgtcgcaggcgccgcgagcgggtaccatctcctcaagatcgacggctactcgcgcatcaagggcctacccaccggcgaggccctcaaatcttgcgccttcaccgtggggggatatcgctggcgcatccattgctaccccaacggcagcaaatcagattactcggatttcatatccctgtttcttcatctcgacgacggacaagtcaccaagcaggtgaaagcgcagtacctatttcgtttcttggacgagttggatgacaagccgccgccttctcttacctcagagcaagtacgcgtcttcggtagcggcggttgggggaaacaaagttcatcaagcgggaagcattggagaaatcggagcatctgaagaaagattctttcaccgtgcggtgcgacatcatcgtcaccaccgggttccgtgcggaggaggagacggccgaggcgcaaagaccacggaaggcgaacttcgtctccgtgcctccgtccgatctgcagcggcatctgggggatcttctccacaacgagaagggcgccgacgtggtgttcgaggccggcggcgagactttcgccgctcaccggtgcgtgctcgcggcgcggtcaccggtcttcagcgcggagctgtttggctcgatgaaggagagcgacgccgcgggtgtcgtccgcatcgacgacatggaggctcaggtgttcaaggcgctgctccgcttcgtgtacaccgactcgcttccggagacggaagaggaggagcaagacaccatggctcagcatctgctcgtcgcggcggacaggtacgccatggagaggctcaagctcatctgcgaggacatgctgtgcaagtacattgatgtgggcacggtgacgaccatcctgacgctggctgagcaacaccactgcgaagggctaaagaaggcatgctttgatttcctcagctccgcggtgaatctgaaagcagttgcttctggcgacggcatcgaggatctgagtaaaagctgcccatctcttatgaaggagttgattgccatgctcggtaactttgttccgtgaccgagttttagtgatatatatcctcacttttgtcatcagatagttttagcaatcatggttactgtttctgaacttattctatgaaaccccttaaaatgggggtgggcagatgaccaattgaccatagtttatcggggtgaaaaggttgccaaattctctgttttgttagttcattgcatctctacaactctatggatagaagaatgataactaaatctcctatgggcttttatgttggttggatgttgcctttatgtgccttgaattctttggtttgctaaggacatacgcaaataaataatcatgttttgctgttagctagttagctggtaaactagaattactctgttgtggaattaatttcatcacttcagttggactcaagttttcaaccgaaatctaaaaggacagccaatgaaacttaattgcacctccaccaataatgtagaatgtacatttacaaagacccactctgtattgagtgatactccgtttcaaatatggtagctcatggtttgtaggcttttttcatcaggcagtttaagcaatgttaattcctattttctagacatgttttatgcttgttgactgtgtccctaggatactgctaattaaattgatgtctgattgctcggtaacttagctccgtgactccatatttttgccatcagatagtttttgcaatgatagttcatgtttgatagcatctctacaatagctacagattaatcaagaatgaatttgttatcagagagccatgataactgaaactccaccaggccttcatattgatcaaattttctctgctttttagttcattgatctctacagttcaacagataaatgaggtatgaatttgttaccacactgctatgagaacttcaaaagaatttgggtggcagtctggcagagtattaaccgtgttcctgtattttctttttcttgtagtgaagcaaccaatgctctaatctacaaaaaaggtacttagtgtaaattcttaccagtatgaaatacaaaaaattatggcttatataagcataatagttgtagtaatttatctacgttaatctaataattaaaaaataaagtaaactaaacggtacacttcatttgttgtaaagttgcactcttttatgttgtgtaaggccgcgttcgatagcgagagatcgaggggatttggtgaattgtgcactattcagcactgtacatgtctgaataatttactgcatattaaatggcgttggtgactaaacgtggcacctgtacagacggcatttggatggatcgattcgtcggcccatccgtccccaacccaccaccagcgcaagcagccgtgctcggtcgtcgacggctccacgcgcggtcgccgtggctggaatcgttgtgccctactgctgagcctcgtccggtggtcgtcgtggtcagcctggggctgttaggcacgcggagaaatcgaccactcgtcacgggagctgctgaaaaggcgaatcgaggccggagaaaggggattctctggcggagttaccatcaagccaggcggaagtcggggagcgctgccggtgttgtctgcgtcacctagctgctcatcaggctctgcagctttggccgcatgcggctgtactcggtggagcgctctcgggtgtcacagtgtcgtcaagattcggcagagttggaagctttcttctcgcctccggcctcctatttgaggcctccttctccgggtggacaatgggcaccaggggaacaaagcggaagagaggggaggacatccatccgtcgactgcagccaaggggcaggctgtgcctttggcgttcgccgcaccggctcctcacggactgctcatcaatctggattcggggacggggtcgagcgcctctggcaaatctgacgccagctctgcccctccttgtgacaatgacatcaatgtggccgcccgcttcctaacagccgtttgtgcgacctccccaaaaggcgttcgctctttcgtccgtcgtgtgtcgccggcgacggttgttcggtccctcgatttggacctgatccggcccatctcgccacaaaaggtaatgcccattgtaatttgtttttgatccattgcatttgtgctttgttaacattgggtggtagatggcggagggtaaaatccgatggagcgacgatgaaattggcatatttcttgaggcatgcttggaggagttgtccgcaatgaccataacatccacttgtccaaagccgcaaggctacaagaacctcatacagaagatgaaggagagaatcggaagaaacctcaccaaggatcaggtgaagtacacatggcgtcaatgtcgtaaaaggtggatgctttggacgtggctggaatcaaaggctaccggcattggccgtgacccgataactcaagccattgttgctgacgacgattggtgggaagacaaggaccaggtatgtcacctacccttatgttgtgttcggtcgaactaggaagatagtgatttccatactgatttgcattaacacaaggacccatgacatttgtttagttcatgaaatctccacagttatctatttttaggtataatcatacatattgttcatagaaagtgttatgtacctttgtaaaaccttgtgtttctaggctacaaaatcagaatgtaatttttttgctataatgaatgggggtacaatttctctgctgcattcactaccttccaataaattgattaggaagcagcaaatgcatggttggtactatttttattattctcttgtaggtcttttcaacaaaactgagccatatcttgagatatttggtattcctatgctattgttgatgccatagtttgacatgacatcaacctctatgtgacatgtcacattgcttacatggcataaagttttttgatttttagtctgctcatcatctgctattattgtcaatgcatatcaatatcatatagtacttcctccattttcttgaattagttagaccgtaaaatctaggtaaaatgttacctgcagtctgcagatgttaaaacatggtgccaccaataatagctatgttgctgcgtacattagttatgtacttgtatgctgctgtcttttttttagttcaaaaagcgtcaacaaaatgcaaaaatgaaaatcgatttaagaaactacttatgttcatttcaatgtaaatttattttgttactcaaccattttcgcagaaaaaggacggagctcgtgtcttcaaagattcccctctcaagcacatcaaccttcactgtgctattttttcggggtgcacagtggtagggaaccactctgctattgcaggcgcagcaccagcacctcctcagcagccaactccaaggcccaacatcaatatctcacagctgctagctcaacaacaaaacattgcgactccaggagtttcaagtgcaggaaaaggcaagaggctagcagatgaagctggcacttcgaggggatcggcttcaaagaagagtcgaagtgactcagccggtgatgccctgcaccggctagctgatttgcgagtggagtcgatggagagctgttcccggaaggtggaagaggacagggctagaagtgcagcagcttgcatccagttggtggtagctgatggacataacccatggagtgatttattctttatggcactggatgtatttgagcgtgcttattggcgtcaatggttcattgattactgccctacacccgagtcacggtcccattacatagtacagacatggcaaaagcaatttggcggaaaaggagctggtggccaaggaggtggacagcctggatacgaaggaggaactgggcagcagcgttatggtgtaggagcacccccgccaactggccagcagggttatggtggaggagtacccccgccaacttgttcaggaggtcatacagggtttggaggttggtaggggggtggccctggtggaggtgggggtcctggtagcgtagatggtaatgggttctattgagttgctcttgcttggtcagttgcctggagctcactgagaggaggagattcatatgagaggcataaaaaataatgctcaccatattgtttgcagtaggattttagcatctgcttaactgtttttttcttgtatgatttgtaccctcttgttgtatgattttagcatcttgttgtatgatttttagcatctgctttactcatttctaatgcttgtagtctgaactagtaattgtggtatgtcactgtgaaattttttatgcagttaatttttttattgaacaccatgcgtgcatttttttacaaataatgttgtaatggttaatgtaagctatatatttttcttgtttcgaaggaatcacacaatgagcgacggttcatcgtggagttcggatggtactgaagggcaatacacgagcgatgaggatgacgctattattgcaatgatgcaagagattttagctgctcctccaagagctcctcgtcgtgtcccaacccaatttggaataacttggatgctagagacaatggcgaatcctgcacagtgccgtgcgattttccgtttaacggaatatcagatatacactctacatggaattttggaaaatgccccttacaacctgcatgggagtaatgatgtaagttctttggaggcactaggaatcttcttgttcacaatggcaggaaataattctgcaagggagtcgaacaatcattgggtccggtcgaactcgacggtgtctatctatttttgaagggttcttagccaaatagttatgttagggtcgaaaatactcaagccaattgatccgaattttacggacatccctcgtcgcctactacaagatagtcgttttggaccattccagtttgctgtaggtgctgttgacggcacacacattccggtcactgttggtgtggatagtgccatagaacacatgaatcgccatgacgagacaacaaaaaatgtcctaacaattgttggattcgatggtagagttatatttgccgatgccggatggccaggatcagtgcatgacaatcgagtcctaaacgaagctattgactcttatccagaggagtttccaagactaccttttcgtaagtactacatttgtacaccatatagcacttcattaattgtgcactgatagttttcatgtataatttccttattattttgtaggaaaatatcttcttgttgactccggatatccgagtaggatgggcttcctggcaccgtacccacgtgtacggtaccacaaggatcaattcaaggggccacgcgctccaccgccagaaggaagggaagagaagttcaactacatacatgccaagctgcgtaatataattgagaggcaatttggaattgtgaaaaaacagtggaaaatcttaaaaggcataccgtacaacccatataagaatgtccagagcgacataatattggcagcgttttgtttgcacaacttccgaatcgacagcaagcaaaatgactaccaggccaataaccctctgtataatggtaatcctatagcaccaatggcaccccccttctccaatatgtattacgccggcaatagcacacaagcgatgaacgcatactgtgatgccattgccaattcggtggagaacctgtag</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001189237.1 RefSeq:Os10g0429500]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 10]]
 
−
[[Category:Chromosome 10]]
 

Latest revision as of 12:44, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information