Difference between revisions of "Os10g0489200"

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(Created page with "{{JaponicaGene| GeneName = Os10g0489200| Description = Similar to DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])| Version = NM_001071452.1 GI:115482647 Ge...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os10g0489200|
 
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Description = Similar to DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])|
 
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Version = NM_001071452.1 GI:115482647 GeneID:4348965|
 
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Length = 6676 bp|
 
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Definition = Oryza sativa Japonica Group Os10g0489200, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
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Please input expression information here.
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AP = Chromosome 10:19010175..19016850|
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CDS = 19011551..19011571,19011658..19011731,19011806..19011877,19011991..19012052,19012243..19012344<br>,19012760..19012872,19013191..19013322,19013538..19013625,19013999..19014093<br>,19014175..19014405,19014949..19015062,19015147..19015248,19015473..19015589<br>,19015683..19016846|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008403:19010175..19016850
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source=RiceChromosome10
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008403:19010175..19016850
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source=RiceChromosome10
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgttcctcctccgcgccaccgccacctccacctccaccgccgcctccgccgccgccgcctcgctcctcctccgatgccaccacccgctctccccgccgcctagaaccctagccctcgccctccccgctcgccctccccccgccctcctcctcccctcccgcttccgcctctcctcctccgcgtcctcctcctcccgacgccgcgcgaccggtgccgcatccgcatccgcgggcgcgggcgcggggaaggggaaggggaaggggggcaagtccagcggggggaaggcggcggccgcggcggcggcgggaggagcggccatgtcggcctcggcgggtgggggtggaggtgggggagggaagcggacggtggcggatgtgctgatggggaacgcgcgggacgcggcgaggaaggcgaagaagggggcggcgccgtcgccgaagaagctgaagacgcagccccagcccgccgcggaggcggatggcggcgcggtggcgaagccggaggagaagccgcattcgccggtgaagcccaagcggtcgtcctcgccgactaagtccaactcgccaggtgaggggaagaggtccgaatcggtggctgctggcgcgaaaccggaggcgaaggagaagccctcgccgaagaagcctaaaaccctaggtgccaaatccgacaccaagtcctccgcggaaggcgttgagaaggagaagaggaggtcaccatctccgacgaaggcaaaagcgctagcttctgaatcccaggacataaagaagccctcctcacctaagaagaccaaagccttggatgcccccaagtctgaggaaaaggacaccaccctcgagctcaagaagaagggcagtgaattcaatcccatggctgctgcttattggagccccgaggagcccgtgccgttcctgttcctcgctcgggcacttgacctcatctctaatgagtctggaaggattgttatcacggagatcctatcgaatgtattccgcacggtgattgccacaacaccagaggatctcctcgcgacagtatacctctcagccaaccggattgcgccgcctcatgaagggactgaacttggaattggggatgcatcaattatccgtgcacttgcggaggcatacggccgcagagaggagcatgtcaagaagaacctaaaggagttgggcgatttggggcttgttgcaaaagcaagcaggttgtcacagaagatgatgtacaaaccgaaaccactgacgatctcacatgtacttgcaaaattccggacaattgcaaaggaatcaggcaaagatagtcaagataagaaaagaaatcatatcaaaggacttctcgttgccgcaactgactgtgaacctcaatacattacacgactacttcagtcgaagatgaggattgggttagcagaaaaaaccgtccagatggctcttgggcaagctgctgtgtattctgaaaaacattctccaccgtcaaaaatccaatccccttttgaagaggctgcaaaaataattaaacaagtatattcagttcttccaatatacgataaaattgtcccagctattctagaagttggtgtttggaaacttccagagatatgcagtttttctattggtgttcctgttggtcctatgttggcaaaagcaacaaagtctgtctcagagatcatagacaaatttcagggtcttgagtacacttgtgagtacaagtatgatggtgaacgggctcagatacattgcctggaagatggatcagtagagatctatagtcgtaatgctgagaggaacactgggaagtatcctgatgttgttgatgcggtttctagattccggaagcctacagtcaaatcatttgtcttggactgtgaaattgttgcttatgaccgtgaaaagaagaaaatattaccttttcagatacttagcacacgggcccgcaagggtgttaccataagtgatatcaaagtgtcagtctgtacttttggctttgatattctttacatcaatggcaagcctcttctccaggaacaactgaaagttcgacgagagcatctttacaactcctttgaggaagtaccaggtgtttttcaattggcaacttcaattacatcaaatgacctcgaggagatacaaaaatttcttgacacagctgtcaactccagttgtgaagggttgattatcaagacattggataaggatgctacatatgagccagcaaaacgatcgaacaattggttgaaattgaagaaagactacatggacagcattggagactctttggatttggtgccaattgctgcctttcatgggagaggaaaacgtacaggtgtatatggatcattcctcctggcatgttacgatgagcagaacgaagaataccaaacaatctgcaacataggcactggattttctgagcaacagcttgaggagcgttctgtgagccttcgaactaaagcaataccaaaaccaaagttgtgctttcattttttttag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MFLLRATATSTSTAASAAAASLLLRCHHPLSPPPRTLALALPAR                    PPPALLLPSRFRLSSSASSSSRRRATGAASASAGAGAGKGKGKGGKSSGGKAAAAAAA                    GGAAMSASAGGGGGGGGKRTVADVLMGNARDAARKAKKGAAPSPKKLKTQPQPAAEAD                    GGAVAKPEEKPHSPVKPKRSSSPTKSNSPGEGKRSESVAAGAKPEAKEKPSPKKPKTL                    GAKSDTKSSAEGVEKEKRRSPSPTKAKALASESQDIKKPSSPKKTKALDAPKSEEKDT                    TLELKKKGSEFNPMAAAYWSPEEPVPFLFLARALDLISNESGRIVITEILSNVFRTVI                    ATTPEDLLATVYLSANRIAPPHEGTELGIGDASIIRALAEAYGRREEHVKKNLKELGD                    LGLVAKASRLSQKMMYKPKPLTISHVLAKFRTIAKESGKDSQDKKRNHIKGLLVAATD                    CEPQYITRLLQSKMRIGLAEKTVQMALGQAAVYSEKHSPPSKIQSPFEEAAKIIKQVY                    SVLPIYDKIVPAILEVGVWKLPEICSFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTC                    EYKYDGERAQIHCLEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIV                    AYDREKKKILPFQILSTRARKGVTISDIKVSVCTFGFDILYINGKPLLQEQLKVRREH                    LYNSFEEVPGVFQLATSITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRS                    NNWLKLKKDYMDSIGDSLDLVPIAAFHGRGKRTGVYGSFLLACYDEQNEEYQTICNIG                    TGFSEQQLEERSVSLRTKAIPKPKLCFHFF</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
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DNA = <dnaseqindica>5280..5300#5120..5193#4974..5045#4799..4860#4507..4608#3979..4091#3529..3660#3226..3313#2758..2852#2446..2676#1789..1902#1603..1704#1262..1378#5..1168#tttgatgttcctcctccgcgccaccgccacctccacctccaccgccgcctccgccgccgccgcctcgctcctcctccgatgccaccacccgctctccccgccgcctagaaccctagccctcgccctccccgctcgccctccccccgccctcctcctcccctcccgcttccgcctctcctcctccgcgtcctcctcctcccgacgccgcgcgaccggtgccgcatccgcatccgcgggcgcgggcgcggggaaggggaaggggaaggggggcaagtccagcggggggaaggcggcggccgcggcggcggcgggaggagcggccatgtcggcctcggcgggtgggggtggaggtgggggagggaagcggacggtggcggatgtgctgatggggaacgcgcgggacgcggcgaggaaggcgaagaagggggcggcgccgtcgccgaagaagctgaagacgcagccccagcccgccgcggaggcggatggcggcgcggtggcgaagccggaggagaagccgcattcgccggtgaagcccaagcggtcgtcctcgccgactaagtccaactcgccaggtgaggggaagaggtccgaatcggtggctgctggcgcgaaaccggaggcgaaggagaagccctcgccgaagaagcctaaaaccctaggtgccaaatccgacaccaagtcctccgcggaaggcgttgagaaggagaagaggaggtcaccatctccgacgaaggcaaaagcgctagcttctgaatcccaggacataaagaagccctcctcacctaagaagaccaaagccttggatgcccccaagtctgaggaaaaggacaccaccctcgagctcaagaagaagggcagtgaattcaatcccatggctgctgcttattggagccccgaggagcccgtgccgttcctgttcctcgctcgggcacttgacctcatctctaatgagtctggaaggattgttatcacggagatcctatcgaatgtattccgcacggtgattgccacaacaccagaggatctcctcgcgacagtatacctctcagccaaccggattgcgccgcctcatgaagggactgaacttggaattggggatgcatcaattatccgtgcacttgcggaggcatacggccgcagagaggagcatgtcaagaagaacctaaaggtaattaaattggggacaatgtaggttcaatcaatgagcaagcattatgaagctgaagtcctaacttgaacatgtttctgttggccattgtaggagttgggcgatttggggcttgttgcaaaagcaagcaggttgtcacagaagatgatgtacaaaccgaaaccactgacgatctcacatgtacttgcaaaattccggacaattgcaaaggttttattcctctcatttctcattacccattattcggactgatattgtcaacatgaactgaacattcttgtcttgatggtgccgagacgattgattgtcagaagtaaatccacactgagtagtaagcaatgggattagagggagggtactctagttgcagaatgcactactatgcattgtcatttcagagatcatttagcaaccatacttttttttttcatcaggaatcaggcaaagatagtcaagataagaaaagaaatcatatcaaaggacttctcgttgccgcaactgactgtgaacctcaatacattacacgactacttcaggtaactcattttaatgtgcctggtgtccatgagtatactgtagtctttgcctctgcctgaagcattaactgttacttgttacagtcgaagatgaggattgggttagcagaaaaaaccgtccagatggctcttgggcaagctgctgtgtattctgaaaaacattctccaccgtcaaaaatccaatccccttttgaagaggttggcgcacatttcttctatttaaagttttaccgtaatgtttgattaatgtggataagtttcaaaatacttgcattgtctgcgcaatagtaatgtttgatttgagtggatggatttccaaatgcttgggttatctacagataaatgcacatgattcaagaggttttcagtttgcattcaacatagttctaatttgttgatccctgctattcctactgaaagtttggccttagaaaatttgatacggttgctagctcaggaattgtaatggcactattttcttgagtgctagcaatccttctgtagccactgcatctagttaatcttggtggtgcatctaatctacattggaacttatgtgagttgcaattttgcgttatgctcttgagagtgctcctgctagcacctgtgtggaggattattaatgtggtttgcttgttcagtaccatcgtattttgtttctggcatcatattgaaagctgtgcatgaataccaacaattatgatatgttctgatgcttattttaaactttgttttttgaaggctgcaaaaataattaaacaagtatattcagttcttccaatatacgataaaattgtcccagctattctagaagttggtgtttggaaacttccagagatatgcagtttttctattggtgttcctgttggtcctatgttggcaaaagcaacaaagtctgtctcagagatcatagacaaatttcagggtcttgagtacacttgtgagtacaagtatgatggtgaacgggctcaggtacgaacaagcccatgattggttagcttttcttatattctgaatttatgatccagtaacacttgatactttggaatgaagatacattgcctggaagatggatcagtagagatctatagtcgtaatgctgagaggaacactgggaagtatcctgatgttgttgatgcggtttctaggtatactgtcctatttttttgccactatcgtgatctcagatttggcggtccactcattgtttccctctttttaaggcctttgatgctaagtttaccttacactgcaacagttgtcgaccaccaatagttcaaattctacatacatatatatgtacagtttggtcaacttgttatttattaggtgctttgctagatttgtttattactttattaaatttaaaacccccttctctttactttatcatgttacgtccacatgtactaacactgttaagccaaacccgtataagctatttaacttgcccatctattgttcatttgctcttgcacatctagttccgaacaaatattatcctgttgcatctaaatgcagattccggaagcctacagtcaaatcatttgtcttggactgtgaaattgttgcttatgaccgtgaaaagaagaaaatattaccttttcaggtttgtatttcgtcccaaacaagatttttgtttggttcataatgaccaccaatataaatatgattatacaacaccaagcagttcagctagaatttttatctgtttcacattagtaaatttttgtttgttttatcgcccttgttttcttagctgatttttatgtatctgttaacactagctctgaggatccagtgattgattcttctttcttgcagatacttagcacacgggcccgcaagggtgttaccataagtgatatcaaagtgtcagtctgtacttttggctttgatattctttacatcaatggcaagcctcttctccaggaacaactgaaagttcgacgagaggtattgttttttctgtactgttatgagctgtattgtttaagttcatctatccattgctatcccatagggcacgttttaacaaagccatggctgcagtttttttacagactatatctgagtcagaatcacttatttgttcagccgtgcctgttgttacatttatcgcatgtgctgcatatgttttcatgaaaaaaaggatctgttgaagtctatttcatagctgatacacatgaagtgttatttcctcaaatccaacaaaataaacctaattcagtcaaatgtttctggagatattccattgacactgaatgcttgcagcatctttacaactcctttgaggaagtaccaggtgtttttcaattggcaacttcaattacatcaaatgacctcgaggagatacaaaaatttcttgacacagctgtcaactccaggtaaatggaatttcagtagcagttggtttaatttgggccaacttatcatacctgtttctagtttggtctgccaccttgcttgttctagaaaattcaacggaagttcaatcgttctctgcagaattatttatagcagatactgctcaatttcaactttgtcttattgttaagttgatttctattgaattcttgtgaaaggacaccttacaaactattagcccgcctaggatgcatatatctgtgaaaataagatgtcaaattaaaccatgcaaaatgtagcattatcatgactttaggactccagtgaaggaataaaaacattttaggcagggatttttaatgatttttgggtgttgcaagtttgcaattagactattggagttttgtcctgccactaagatcaatcgctgtgcagttgtgaagggttgattatcaagacattggataaggatgctacatatgagccagcaaaacgatcgaacaattggttgaaattgaagaaagactacatggacaggtcagatttcatgctgtgccagattttactcatctttgattacacaacagattagatctagtaaattgatgtgggctagataaaaaaatcatgtgtttatcctatatgttacggtccaaccattatagttttttgtgtaccatttactcggcataggatcatttaattgtttttttttcttggggagcagcattggagactctttggatttggtgccaattgctgcctttcatgggagaggaaaacgtacaggtatgctttcttccatcatacgtactgaaaataaaaatgagttaaacaaagtaatgtgcatatggatcattcctcatggatttatctgtgtccgtttggctcgtgcttactaggtgtatatggatcattcctcctggcatgttacgatgagcagaacgaagaataccaaacaatctgcaacataggtatgttggttttttaaccttatcctgttagtatgatgatttgattcatgttttatatcttgatccacatttaggcactggattttctgagcaacagcttgaggagcgttctgtgagccttcgaactaaagcaataccaaaaccaaaggtggtgcatcccttcagcctgctattgcatgattattctctttttatcttttgttcattgtcttgtcctgttgttctgttctacagttgtgctttcattttttttaggcatactataggtttgctgacacaatggacccagatgtgtggtttgagccttcagaggtaatgcccaccttaaacttttgactaccgactgtttcttagttgtactcgtacttcttgttaggggcttttgccatcactcactgctggtctggaactcttgatttgattgacctgggtttgtcccattcttctcaaatctgaactcagtttatgatatgaatttctacttattcaacaccaatgctttatgttttacccctatatattctacattttttttgttgatgttacattccaatgtttttgaatttcatatcttccaaatgaactattgtttgatctctagattttctatacgtgtaccatagcaccttactacatatggaattgaccgaattgttttgggaattttctagaacttctaagcatatttttgtgtagtgttttacatggttttattgaatttgttgttttacttcttacttccccggatatattttgaccctaaagtttaaattaaggggtctaggcagctttgatttaattttctgattgttgaggtttgctattatattttgttgatcctcaggtttgggaggtgaaagctgctgatttgagcattagtcctgtgcatcgtgctgccaatggtatagttgatccgaacaaggttggttttgctatccgccgtaatcccgttctgtagtatatatgcatgagtgcatgattttgatactaatagccaaattgaaccagggcatctccctaagatttcctcgcttgttacgtgttcgtgatgataaaaatccagaacaggcaaccacatctgagcaagtaagtttctcccgcttgtttctttctttatggcacgatcttaagatttctcatgcatgactactactatgttcaaattcccaggttgctgatatgtaccgtgcacaaaagatataccatgcgaacaacaataacgatgatgaggatgatgactagactatgaggtaaacaccgaacttattttaaatctccagataattgtttggttagaaatattcattcatctgaatattttccaggccactaacaagagttcatgtccaggatttcgtttcgtcttggcctcgacgttctgattggttgacatgtagcgttttaggtgcgagattcgtaatgtgattctttttttttcacacgctaaatccaaactggtggtgcggtgttgcacagtagggaattgaagagcatggccgcgtcgctcgtgtggcgctaatacaaaccttcctgttaacctgagatgtacatacatgataacatgagtgacccttcgattggcaagggcactgtttgatttttatctagacatgcactgtttgatttttttt</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071452.1 RefSeq:Os10g0489200]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 10]]
 
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[[Category:Chromosome 10]]
 

Latest revision as of 12:47, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information