Difference between revisions of "Os10g0539600"

From RiceWiki
Jump to: navigation, search
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
GeneName = Os10g0539600|
 
Description = Similar to Calcium-dependent protein kinase 3|
 
Version = NM_001071715.1 GI:115483173 GeneID:4349249|
 
Length = 4750 bp|
 
Definition = Oryza sativa Japonica Group Os10g0539600, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
 
AP = Chromosome 10:21482748..21487497|
 
CDS = 21483488..21484169,21484503..21484646,21484729..21484881,21485059..21485174,21485811..21485975<br>,21486277..21486498,21487068..21487190|
 
GCID = <gbrowseImage1>
 
name=NC_008403:21482748..21487497
 
source=RiceChromosome10
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008403:21482748..21487497
 
source=RiceChromosome10
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggggaattcttgccaaaatggaacctatgggaacaattaccagaacagcaaccggtttcagaatgaccgttttgcttctcggtacgttgatgggaatgatactgaggattgctactcgggctcgtcaagggccagcttagcgggtgctctgcggcaagggctgaacctaaagtcccctgtccttggatacaagactccaaatgtaagggagctctatactcttggccgggagcttggacagggacagttcgggaaaacatacctctgcactgagattagcacagggtgtcaatatgcatgcaagactatcttaaagagtaatctccgatgtgtgtcagatatcgaggacgtgcgccgtgaaatccagataatgcaccatctttcgggccagaagaatatagtgacaatcaaggacacatatgaggatgagcaggccgtgcacatcgtcatggagctctgtgcaggtggtgagctcttcagcaagattcagaagcgaggtcattacagtgaacggaaggctgcagagcttataaaaattatagttggcatcatagaaacatgccattcacatggagtgatgcaccgggatctcaagccagaaaatttcctcttactggacgcagacgatgaattctcggttaaagcaattgactttggtctatctgtgttcttcagaccaggtcaggttttcagagaggtagtgggaagtccatattatattgctccagaggtattggagaagcgttatggaccagaggctgatatatggactgctggagtgattctctatgtattgctgactggtgttcctccattttgggcagatacacaaagcgggatatatgaaaaagtactggatggacgtattgattttaaatcaaaccggtggcccaggatatctgacagtgcaaaggatcttataaaaaagatgctctgcccttatccatcagagcgtttgaaagcccatgaagtgctaaagcatccatggatatgtgataatggagtggctactaatcgagctctggatccaagtgtacttcctcgtctcaagcaattttctgcaatgaataggttaaagaaattgtctctccagattattgctgagcgtctttcagaagaggagattgttgggttaagagaaatgttcaaggctatggacaccaaaaacagaagtgtggttacatttggtgagcttaagggactgaaaagatacagctcagtgttcaaggatactgaaattaacgacttaatggaagcagctgatgacaccacctccaccatcaactgggaagagtttattgctgcagcagtgtctcttaataaaatagaacgtgagaaacacttgatggcagcctttacatactttgacaaagatggaagtggttttatcacagttgacaagcttcaaaaggcttgcatggaacgtaacatggaagatactttccttgaagagatgattctggaggttgatcaaaacaatgatggtcaaatcgattatgctgaatttgtcacaatgatgcaaagcaacaactttggacttgggtggcaaacggtggaaagcagcctgaatgtagccctgagggaggcaccccaagtatactga</cdnaseq>|
 
AA = <aaseq>MGNSCQNGTYGNNYQNSNRFQNDRFASRYVDGNDTEDCYSGSSR                    ASLAGALRQGLNLKSPVLGYKTPNVRELYTLGRELGQGQFGKTYLCTEISTGCQYACK                    TILKSNLRCVSDIEDVRREIQIMHHLSGQKNIVTIKDTYEDEQAVHIVMELCAGGELF                    SKIQKRGHYSERKAAELIKIIVGIIETCHSHGVMHRDLKPENFLLLDADDEFSVKAID                    FGLSVFFRPGQVFREVVGSPYYIAPEVLEKRYGPEADIWTAGVILYVLLTGVPPFWAD                    TQSGIYEKVLDGRIDFKSNRWPRISDSAKDLIKKMLCPYPSERLKAHEVLKHPWICDN                    GVATNRALDPSVLPRLKQFSAMNRLKKLSLQIIAERLSEEEIVGLREMFKAMDTKNRS                    VVTFGELKGLKRYSSVFKDTEINDLMEAADDTTSTINWEEFIAAAVSLNKIEREKHLM                    AAFTYFDKDGSGFITVDKLQKACMERNMEDTFLEEMILEVDQNNDGQIDYAEFVTMMQ                    SNNFGLGWQTVESSLNVALREAPQVY</aaseq>|
 
DNA = <dnaseqindica>741..1422#1756..1899#1982..2134#2312..2427#3064..3228#3530..3751#4321..4443#tctcctctccatttttttcctcctatcgattttgcaatttagcccctagggaggcagggaatccggctccggtccctgtgccgctccccccggctctccttgcctcccttgctcctccgatcgaggctgaagcggcttcaggtgagccccgtcctggcgattcttgattcgcttggatatacattttgtagcgagttcatcgtctcgatttagatttcgtttgtttttggctggccatggctttggggttgggtggattggaggaggtgaagtgaagtggttcttccaggaggagatttttggtggagattttggtgctgggagcctttgggttggggattgtgagctgtaggaaggtttaaagggagatgcctttggaggaaactgtactgaatttggtgagggtgtaggatgcatagagctatagaaggttggggaatttgctgctcgtaggagcttaggagagctcgaaactttggataatatcacaattgtttaggtgattagttacttgtcgattggttgtgttttgataacatagagtctggttgttggggtgtccagttttaggctaaggtcttgctctactcttactgtattactacaataagtacaagttctgaatgagtactaaattaagctggagttctcctttttagcaggcttttccggatccctgtgaagtgttgtagatatctaacttgcatattgtatcatgcaggatatacatttttgtgggaatggggaattcttgccaaaatggaacctatgggaacaattaccagaacagcaaccggtttcagaatgaccgttttgcttctcggtacgttgatgggaatgatactgaggattgctactcgggctcgtcaagggccagcttagcgggtgctctgcggcaagggctgaacctaaagtcccctgtccttggatacaagactccaaatgtaagggagctctatactcttggccgggagcttggacagggacagttcgggaaaacatacctctgcactgagattagcacagggtgtcaatatgcatgcaagactatcttaaagagtaatctccgatgtgtgtcagatatcgaggacgtgcgccgtgaaatccagataatgcaccatctttcgggccagaagaatatagtgacaatcaaggacacatatgaggatgagcaggccgtgcacatcgtcatggagctctgtgcaggtggtgagctcttcagcaagattcagaagcgaggtcattacagtgaacggaaggctgcagagcttataaaaattatagttggcatcatagaaacatgccattcacatggagtgatgcaccgggatctcaagccagaaaatttcctcttactggacgcagacgatgaattctcggttaaagcaattgactttggtctatctgtgttcttcagaccaggtattatgtcagagtcaataagtatattcaatggggttgtttctatatttagtcatgttagcaatcagctgtttgatatcctgctaacttatttagttatgatgtaaatagttccgtacaaagagcgagtaaggtgaaagtatggcagagtagaaaaacaatcccaatcaaattttctaccagtaatttagtcttggaaacattagtttgttgtagttccttataatgcagctttaacaaaaacaaataataatgtaattgtttactcttgcatacaatctatgcttcctttggctgtttttcctaactgattcatatctatccacaaatcaggtcaggttttcagagaggtagtgggaagtccatattatattgctccagaggtattggagaagcgttatggaccagaggctgatatatggactgctggagtgattctctatgtattgctgactggtgttcctccattttgggcaggtgattgatttgacaagatttgcaaaattctgcttcattggttttagtgaattgctaaaaggacttctttcactcttactagatacacaaagcgggatatatgaaaaagtactggatggacgtattgattttaaatcaaaccggtggcccaggatatctgacagtgcaaaggatcttataaaaaagatgctctgcccttatccatcagagcgtttgaaagcccatgaagtgctaagttagtatatttaatatttcgttcattagtatcacttttattcaatttagtacctcgtagaataattttggaccaatgtttttgttatccacgaaatttcataagttccgaaactatagtaagatctcaagagtaaacaaagagcagtttcttacagtttttctattatatgttcagagcatccatggatatgtgataatggagtggctactaatcgagctctggatccaagtgtacttcctcgtctcaagcaattttctgcaatgaataggttaaagaaattgtctctccaggtatatttttttttaccgtttcatcttgtcatagaaaagtcatttatttgtttccattttgtcatcatggtgaagcatcattaaatgctttcacaatttccagggaaatcattattctattactgctgtcctttaatactaaatctaacagaagtgtgaacctttttaaattccagaagcatagctacttctacaagaataaaaacaaagctaccttgtgtacatcatgccatcatggccaaattgatttgctgcagttcagatttttcctcgtaggatcttaaaaatttgacagcactgaaattgtttttaaatctgactcagtaatattttcttcattggtgaattgtttattgttatcatatacgaagatcttttgtcggtattgtacctgttccagcattgcttccaagttgagagttacagacttttatggtgcacctaaatttactattctaaattgacccagatataatttcataaattgctatgatacaaaagtaggagatgctaggaatcaggatgagattaattaaggcatcaatttttacttaaactattatgtctatctatttctcatatttaaaaatattacagattgcagtaatctatgtttcttacttgctgttcatccagattattgctgagcgtctttcagaagaggagattgttgggttaagagaaatgttcaaggctatggacaccaaaaacagaagtgtggttacatttggtgagcttaagggactgaaaagatacagctcagtgttcaaggatactgaaattaacgacttaatggaagcagtaagtggtcactgttattgcaaaatacgatgcaaaatgtactgtagcacacttaaaccatatacatggtatctgtagtatatagactggatattgtttgtcaaccttttgatcatgctgcttttcagaattctgtattgttttgaatgtgtgtgaaaagtcggggccaacacattcatgtcaaaagattacttaaaccattggtttagttgaaatggagtatgtcatgcatctgtgatgaaatactgtcttcattgcagaactgttttatatattttaacctttttgagtactacttcaggctgatgacaccacctccaccatcaactgggaagagtttattgctgcagcagtgtctcttaataaaatagaacgtgagaaacacttgatggcagcctttacatactttgacaaagatggaagtggttttatcacagttgacaagcttcaaaaggcttgcatggaacgtaacatggaagatactttccttgaagagatgattctggaggttgatcaaaacaatgtaagttctgtactgtttttcaagctataagatcagtgtgctagtattagttattgctgttcagtagctaattgttctactcgtgaagaatttgatggcactggttatagaatagcagcatgtatgtggtagaagttggtcctaaatgatgtttcactttcagtattaccttcagcaatagatatgaaccaatttggatcctctgcagtggaagacctggatccgatatgaacaactataatgatgttatttacaggctgtttaaaaatgtatagtttagaggtttcatacttttgcgctttcacccccaacttattgtcctctttgtttgaggataaactgaacagctgagggaagacttcccatatgttcaaaagggcctcaattatttggcatatactgttgaattatcataagatgaatacttatatttgcttagtaacataggaaagcaagttatgtttttctcagaacagaaaaggtgtcattgagattatttttgcttccttgctgaacatctcatcagtaattatgtttttcttgttcttttttttttggtaaattttcaggatggtcaaatcgattatgctgaatttgtcacaatgatgcaaagcaacaactttggacttgggtggcaaacggtggaaagcagcctgaatgtagccctgagggaggcaccccaagtatactgaactcctgtcgcctggcacccccaagaattcagtttgttctcctgagcctttcatctgtttatcacaacacatagttgtggatttgagagaagagagccaagactagatggtttatcagtaatcaccctatagcagtggtggaagaagactctcttagtacctaatagcatataaatgtgtggtctaaagacatcgtatatgtatgaacctcataagttcgttcgttcgttcgtttggttggttggtttgctaccctgctatctaataataatatcaataatacccgaagaacccctcttggttctgc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071715.1 RefSeq:Os10g0539600]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 10]]
 
[[Category:Chromosome 10]]
 

Revision as of 12:50, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information