Difference between revisions of "Os08g0130300"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
GeneName = Os08g0130300|
 
Description = Tetratricopeptide-like helical domain containing protein|
 
Version = NM_001067456.2 GI:297607921 GeneID:4344588|
 
Length = 4343 bp|
 
Definition = Oryza sativa Japonica Group Os08g0130300, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
AP = Chromosome 8:1709674..1714016|
 
CDS = 1709674..1709791,1709855..1710057,1710405..1711677,1712147..1712215,1712287..1712435<br>,1712622..1712834,1713732..1714016|
 
GCID = <gbrowseImage1>
 
name=NC_008401:1709674..1714016
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008401:1709674..1714016
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgccgagcggagggaggcggctgccgccgtggacgtcgccgaggggggcggcgccgaggtggagcccctgcacgcctgcgggcgcggacggttcgggccgcgccgcccacgccacgccgccggcgagcggcgggtgctcctcgcacgtgacgcccccggcgagcggtggtggcgggtgttacggttaccgtgtcacgccgccgacgagcggcgggtgttcccggcctcctagggcgccgctgtcgtcggtggattcgccctacgtgcgggcgaagcaggctcaggtgattgaaaaggacccaaacaaggcagttccattgttctgggcggctataaacagtggtgatcgaattgagagcgcactgaaggatatggctactgtactgaagcaagcaaatcgagccgaagaggctattgaggcaataagatccttccgtgatcgttgcccaaatgaagctcaggaatctcttgacaatattcttcttgacctgtacaagaaatgcggcaggacaaaagagcagattgaaatgctgacattgaagttgagaattgttgatgaggagctagcttctggcaggtggaaaaccaagttgtctaaatctcatggaagagtagtttatttgtctctcagggatgaaaaagcaaggttgttgggtaaccttgcctgggcccatatgcagtctgaaaattatgatgaggccgaaatgctctacaggcaagctcttgctatagaagctgattataacaaagagtgcaacttagctatctgcctgataaagaccggaaaggtagccgaagctaaataccttctccaatctatacctgacaactgcagtgatgaaagccatgtgaggtctcttgctcgggccagagaaatgcttatggaacttgagtcaccaacactccattctcccataactcagatgaaatctaaagaatcattaatctggcttgctattgatgcggagaaccttgggcatttacagccacaggtatcctcaactgctttgactcaactgaaatctgaagaaccacatatttcagttgctgctgatgcagagaagcaggaggattgcaattcacaagtatttccatctcccattactcagatgaaacgtgaagaaccagaaagtttgattgctaccagtggggagaataatgagaaatgcctgaatgaataccaagatctttctcgactgttcaatgatgctgctacaccccagtcgttgcttgagaaactacgaaaacggctggtgaaagaggacacactaaatatcagcatacagcaccaagttcagattcctagttttgttgaatgcttgccaaactctggtggctccacagatgctggtgagaatactaggccagagggaaaggctcttgtcaatggtgttagaaaaacatgggctgatatggtggaagaagatgaacgtcaattgggtgatgtcagctcaacgatcggtatggacactactaagcgaaatgtaagctgcaagcatgcaaatgaggagatgtatagaacaccctcattctctcaagaaagcagcgccttaaaaagatcaagcgtggatgatcacccacagagttcttcagcggattcatggagacacagtgactccaaaatatccacagatgagaacgtgaacatgaagtttgtcaggactgctccacaatggagacagcagaaggtgcaagattacagtaaccgagtctcccaaaggctcgacacaagccatctcagtgatagagctgaaggcacagagcaaccaccttggagaagcagcacagctcagcgttcgctttttcctgactggaaatccaagtgtgaaagatatggacatggttatgtgccatttggtgacaatgaacattttcaaggttccagtcactttgaggccaccaatcgttggcctaagaatgcgagaccatggaggcctcagaaccgcctctgggtcttccaagaaatcacaaatgagatcaaccaaaaacagactagagcactgtggcttaccatatacaccacgttgttgtttggcactactgctttagatgatactgcatggttccttgttgaatgttttcatctgttggctggacatctgctgctccatgatgggctgcaagatctgagtgttgctcccccctctgggcaatttgcagaaatggcaatgcaaatgcatccagccactgggttgtctacacactggagtcaggtggattccccaccactgaagctgagagagggtgctaacatggtggtgctggtgctgtcctcagggacagcaatggctggctggcagcagccttga</cdnaseq>|
 
AA = <aaseq>MPSGGRRLPPWTSPRGAAPRWSPCTPAGADGSGRAAHATPPASG                    GCSSHVTPPASGGGGCYGYRVTPPTSGGCSRPPRAPLSSVDSPYVRAKQAQVIEKDPN                    KAVPLFWAAINSGDRIESALKDMATVLKQANRAEEAIEAIRSFRDRCPNEAQESLDNI                    LLDLYKKCGRTKEQIEMLTLKLRIVDEELASGRWKTKLSKSHGRVVYLSLRDEKARLL                    GNLAWAHMQSENYDEAEMLYRQALAIEADYNKECNLAICLIKTGKVAEAKYLLQSIPD                    NCSDESHVRSLARAREMLMELESPTLHSPITQMKSKESLIWLAIDAENLGHLQPQVSS                    TALTQLKSEEPHISVAADAEKQEDCNSQVFPSPITQMKREEPESLIATSGENNEKCLN                    EYQDLSRLFNDAATPQSLLEKLRKRLVKEDTLNISIQHQVQIPSFVECLPNSGGSTDA                    GENTRPEGKALVNGVRKTWADMVEEDERQLGDVSSTIGMDTTKRNVSCKHANEEMYRT                    PSFSQESSALKRSSVDDHPQSSSADSWRHSDSKISTDENVNMKFVRTAPQWRQQKVQD                    YSNRVSQRLDTSHLSDRAEGTEQPPWRSSTAQRSLFPDWKSKCERYGHGYVPFGDNEH                    FQGSSHFEATNRWPKNARPWRPQNRLWVFQEITNEINQKQTRALWLTIYTTLLFGTTA                    LDDTAWFLVECFHLLAGHLLLHDGLQDLSVAPPSGQFAEMAMQMHPATGLSTHWSQVD                    SPPLKLREGANMVVLVLSSGTAMAGWQQP</aaseq>|
 
DNA = <dnaseqindica>4226..4343#3960..4162#2340..3612#1802..1870#1582..1730#1183..1395#1..285#atgccgagcggagggaggcggctgccgccgtggacgtcgccgaggggggcggcgccgaggtggagcccctgcacgcctgcgggcgcggacggttcgggccgcgccgcccacgccacgccgccggcgagcggcgggtgctcctcgcacgtgacgcccccggcgagcggtggtggcgggtgttacggttaccgtgtcacgccgccgacgagcggcgggtgttcccggcctcctagggcgccgctgtcgtcggtggattcgccctacgtgcgggcgaagcaggctcaggtaattggaattcggaaaccatcatgtgcgatgcaatttcgtttactctggagagaggttgcaaattaggttgctgaagtatgctcaatatggtgactgtgtgtactatattaatttcaataatgagtagtttgtgagggagaaggaagggcaaaagcattttgtggttgttttagttacagtattttccattgtttcatgatatgtttgaattgaatttaggatatcctgggggcaaaaacttcacaaaaagcaatgggatggcatcgttttggtgtgaagcttttcttgctgattagctttttttcatagtttctgctttctagaactctgtaatctgaatttgtttccagtaatggaaaggggaagctctgcttctctgtcccccctcaacccacaaaaaaaaaaaacacttttaattgaaccagaagagagaatatgaaggtaatttccatgatatagataaaactacttctatgtttctttaacaaaaccagtattagagtaaaatcgtaaagcgatatagaaattgtgttctcatgactaggctcccttgttaccagaaatctattatactaaaagactgatagaccatctcaaaaaagattgaatagacaccagccacaccacctgggcaagttttgatggtgtgttgccactaacgcatgctattctaactagtaactgtagtgggtactaatttttcccttaattgttgcttcaacatattcatgctaaatcattcagtacatgttacttgcttttttgcaaagtgacagcgtttctttttctacagctctttcagttttgtgaacaaaaatgcatgtaataacctgaatctagaaattttcataagctagatctgaggtttttgttttcttgtcttgttttctgcaggtgattgaaaaggacccaaacaaggcagttccattgttctgggcggctataaacagtggtgatcgaattgagagcgcactgaaggatatggctactgtactgaagcaagcaaatcgagccgaagaggctattgaggcaataagatccttccgtgatcgttgcccaaatgaagctcaggaatctcttgacaatattcttcttgacctgtacaaggtatcttggcctgtaaaccaagaacctacaagctaaatctttctgttgtaaagtaattctgtgatttggtaggcctatagcagtagatcctaaagacatctaaattgctgcactgatgacatgttaattttagatgaagatgcgaccatttctgttctgatactagtcatttttatgtaaaaccagaaatgcggcaggacaaaagagcagattgaaatgctgacattgaagttgagaattgttgatgaggagctagcttctggcaggtggaaaaccaagttgtctaaatctcatggaagagtagtttatttgtctctcagggatgaaaaagcaaggtatttaaaatctttcgtacattgctattcaaccagtaaacatcattctgatgctcttatttgtcttgaaggttgttgggtaaccttgcctgggcccatatgcagtctgaaaattatgatgaggccgaaatgctctacaggtatacttttgagtccagttttcatcaacatcagatggcttgtatctcccaaagtggcagtatttatttatcctgatttctagtttattagaaatgctcacatttggtgttcatttgagaaaattaagaggaaaaaataggcgctactatattccttcaatagttccatagtgtgaaaactgaaaacaaaacatgtataggcagagctcatacccttttcattcaaaaaggaaaacaaaacatgtggccgcacagttaaaatcatctaggtgggcttgaaatgactatactcagcagtcagcacttatgaatcctagaagtaattatataataaaaaccatttattgaaactgcaagcaacaatcagctctaatgaatgctgatactagtaggagtgatatctggtttacgttattcaactaatccagctggtactgactactgactagccgtatgtcatttgacacaggcaagctcttgctatagaagctgattataacaaagagtgcaacttagctatctgcctgataaagaccggaaaggtagccgaagctaaataccttctccaatctatacctgacaactgcagtgatgaaagccatgtgaggtctcttgctcgggccagagaaatgcttatggaacttgagtcaccaacactccattctcccataactcagatgaaatctaaagaatcattaatctggcttgctattgatgcggagaaccttgggcatttacagccacaggtatcctcaactgctttgactcaactgaaatctgaagaaccacatatttcagttgctgctgatgcagagaagcaggaggattgcaattcacaagtatttccatctcccattactcagatgaaacgtgaagaaccagaaagtttgattgctaccagtggggagaataatgagaaatgcctgaatgaataccaagatctttctcgactgttcaatgatgctgctacaccccagtcgttgcttgagaaactacgaaaacggctggtgaaagaggacacactaaatatcagcatacagcaccaagttcagattcctagttttgttgaatgcttgccaaactctggtggctccacagatgctggtgagaatactaggccagagggaaaggctcttgtcaatggtgttagaaaaacatgggctgatatggtggaagaagatgaacgtcaattgggtgatgtcagctcaacgatcggtatggacactactaagcgaaatgtaagctgcaagcatgcaaatgaggagatgtatagaacaccctcattctctcaagaaagcagcgccttaaaaagatcaagcgtggatgatcacccacagagttcttcagcggattcatggagacacagtgactccaaaatatccacagatgagaacgtgaacatgaagtttgtcaggactgctccacaatggagacagcagaaggtgcaagattacagtaaccgagtctcccaaaggctcgacacaagccatctcagtgatagagctgaaggcacagagcaaccaccttggagaagcagcacagctcagcgttcgctttttcctgactggaaatccaagtgtgaaagatatggacatggttatgtgccatttggtgacaatgaacattttcaaggttccagtcactttgaggccaccaatcgttggcctaagaatgcgagaccatggaggcctcagaaccgcctctgggtcttccaagaaatcacaaatgagatcaaccaaaaagtagtataaatacacatgtaatccagcaagtagttgtttgcactagaatgagataggtgagaaatagctcctcatacaaagttctgttttgagaagaggcgcttctagcgcttgaactgtaacagtttcaaagaagtaatcgtattgcgcaaactctccgagcattgtcatacacagttcatatgcctctctgtatctgagattgagtccacaaacacaacacactgccattgtgcatgactcatggattgtaccattgagatatgtaaatgtgagcaacaatctggttgtgattcagttacagtgtctgaaggaatcttttctcccccatatactacatttcacagcagactagagcactgtggcttaccatatacaccacgttgttgtttggcactactgctttagatgatactgcatggttccttgttgaatgttttcatctgttggctggacatctgctgctccatgatgggctgcaagatctgagtgttgctcccccctctgggcaatttgcagaaatggcaatgcaaatgcatccagccactgggtaagcaatgtatgcatgcattatctgcatctgcatagtgctcacccctgtgtcattttgtaggttgtctacacactggagtcaggtggattccccaccactgaagctgagagagggtgctaacatggtggtgctggtgctgtcctcagggacagcaatggctggctggcagcagccttga</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067456.2 RefSeq:Os08g0130300]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 12:54, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information