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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]] |
| − | GeneName = Os08g0154600|
| |
| − | Description = Similar to Topoisomerase I|
| |
| − | Version = NM_001067550.1 GI:115474836 GeneID:4344685|
| |
| − | Length = 6046 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os08g0154600, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
| |
| − | AP = Chromosome 8:3135763..3141808|
| |
| − | CDS = 3136561..3137790,3137931..3138125,3138239..3138319,3138671..3138730,3138813..3138907<br>,3139007..3139163,3139243..3139368,3139745..3139825,3139904..3139994<br>,3140082..3140215,3140415..3140483,3140566..3140655,3140752..3140855<br>,3140941..3141109,3141413..3141481|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008401:3135763..3141808
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008401:3135763..3141808
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggctgttgtcgatcctgttatgtttgacaacgacgacgaggaaggtccgatctccttcaagaggtcgagcacctctgtgaagaacaggcccacccccacaaagcaggagggctcatcagggaatgccggacctattaggagccctaaggctgttgcttccaatcaacagaagaatgggctgactggtgtttcgaggcctttgcaacagaggccgcagtcaagcagtccaaaccctcgacctttgggatcaggtcagccgaacagttccaaagaacatagtagccataatagtaactcagtggataagagtaaattgaaaagacctttcgtggaagataagtcggatgactcagaagatgaccataagccaatcggattaaggagaaaggtcgaggatagaaatttgaagaaacctgctgtaggaagtgggacagcaaatgattcagatgatgataaaccattgagtctcaagataaactcaacaaaaacgccttcgagtagtgcaaataaggctattgtactgaaaactacacctaaaattgagcaacctggtgatgattcagaggacgataaaccactggccagcaggttgccaactaatgctgctctgaaaaggggaggtaatgtttctgatgattcagaggatgagaagccattggctgcccgattttcgaaagttactggcaatgcatctgcaagtatctcaagttcaaaggacaaggtcctgtctgcaagtataaaagcaagttcttccagcaagatgtctaacaatgacgcgagcacatcacgaaattcaattaaaaggccaattgacaataataatcaaacaagttcagctctcaagaaggcgaggccttcagatgtttctgcgtctgcaagtgtcaaaagagaacccaaggcggatgacaatgacaatgtacctctttcacaaagactgaaaatgggtgagtcttcaaaaagcaagccacctgcaaagaatatcgtaaagaagagtccttcatctttaaagaaggacaacaagaaaatgaaaatgaaaatgaaaacaaagaaaacaatgaaaaattctcagttctcaaagacaatgaaggtccctcctggatctggtggtggacagaaatggactaccttggtgcacagtggtgttattttcccccctccatacaagcctcatggtgtcaagatgctttacaacgggcaacctgttgatctgacgccagaacaagaagaggttgccaccatgtttgctgtgatgaaagacactgattatgcatccaagcaaacattcattgacaacttcttcactgattggagaaaaattcttggtaaaaaccatgtcatcaagaaatttgagctttgtgatttcaccccgatctatgaatggcacctaagagagaaggagaagaagaagcagatgacatctgaggagaagaaagcattgaaggaagagaaattgaaacaagaggagaagtacatgtgggctattgtagatggtgttaaagagaaggttggcaatttcagagtagaaccacctggcttgttcagggggcgcggagagcatccgaagatgggaaaactgaagcgccgcattaaaccaagcgatattacaataaatatcggaaaaggggctccgatccccgaatgtcccatacctggagaaagttggaaagaagtcaaacacgacaacacagttacatggttggccttttggaatgatccaataagccaaaaagatttcaagtatgttttcttggcagcaagcagtgcattaaagggccaaagtgacaaagagaagtatgagaagtctcgaaaattgaagcatcacgtacacaaaattcgtgacacttacacaaaggatttcagaagcaaagataagacaaagaaacaaattgcagtggcaacataccttatagataagttagcccttagggcaggcaatgagaaggatgaagatgaggctgaaactgttggttgctgtacactgaaggttgataatgttacttgtgttcctccaaataaactgcagttcgacttccttggtaaagattctataagatacttcaatactgtagaggttgaactgcttgtatacaaggcaattgaggaattccgtgctggcaagaaaccaggacaagatctctttgacaaactcgatacaaccaggctaaatgctcatctaaaggacttgatgcctgggcttaccgcaaaagtgttccgtacatataatgcttcaatcaccttggatgatattttgcacaaagaaacagaagatggaactcttcttgaaaaaattgcggtttatcaacgagccaacaaagaggttgctataatctgtaaccatcagcgtagtgtctcaaaatcacatgattcccagatgactagattgaatgagaagattgatgaattgaaggcccaaagggatgaattgaaggcagacttgagcaaagtaaggaaaggaaagaatctaggcaatgacaaagatgggaaaccaaaaagaaatttggcccctgaagcgtttgaaaagaagatatctcagattgaaaccaagatagagaagatggagatggataagaagattaaagaggatttaaagacagtggcactaggaacttcaaagatcaattaccttgatcccagaattactgttgcatggtgcaaacgccatgaagtacccatcgagaagattttcaacaaatcactcattgcgaaattttcgtgggcaatggacgtcgacccggatttcagattttaa</cdnaseq>|
| |
| − | AA = <aaseq>MAVVDPVMFDNDDEEGPISFKRSSTSVKNRPTPTKQEGSSGNAG PIRSPKAVASNQQKNGLTGVSRPLQQRPQSSSPNPRPLGSGQPNSSKEHSSHNSNSVD KSKLKRPFVEDKSDDSEDDHKPIGLRRKVEDRNLKKPAVGSGTANDSDDDKPLSLKIN STKTPSSSANKAIVLKTTPKIEQPGDDSEDDKPLASRLPTNAALKRGGNVSDDSEDEK PLAARFSKVTGNASASISSSKDKVLSASIKASSSSKMSNNDASTSRNSIKRPIDNNNQ TSSALKKARPSDVSASASVKREPKADDNDNVPLSQRLKMGESSKSKPPAKNIVKKSPS SLKKDNKKMKMKMKTKKTMKNSQFSKTMKVPPGSGGGQKWTTLVHSGVIFPPPYKPHG VKMLYNGQPVDLTPEQEEVATMFAVMKDTDYASKQTFIDNFFTDWRKILGKNHVIKKF ELCDFTPIYEWHLREKEKKKQMTSEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRV EPPGLFRGRGEHPKMGKLKRRIKPSDITINIGKGAPIPECPIPGESWKEVKHDNTVTW LAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKHHVHKIRDTYTKDFRSKD KTKKQIAVATYLIDKLALRAGNEKDEDEAETVGCCTLKVDNVTCVPPNKLQFDFLGKD SIRYFNTVEVELLVYKAIEEFRAGKKPGQDLFDKLDTTRLNAHLKDLMPGLTAKVFRT YNASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICNHQRSVSKSHDSQMTRLNEK IDELKAQRDELKADLSKVRKGKNLGNDKDGKPKRNLAPEAFEKKISQIETKIEKMEMD KKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKFSWAMDVDPDF RF</aaseq>|
| |
| − | DNA = <dnaseqindica>799..2028#2169..2363#2477..2557#2909..2968#3051..3145#3245..3401#3481..3606#3983..4063#4142..4232#4320..4453#4653..4721#4804..4893#4990..5093#5179..5347#5651..5719#aaggcgagagagggagggagaggagtcggaggcagcggcgcgggcgaggcgaggtgagagcgagcgatagaaatacgagagcgggaggagaggcgaggagagagagacacagataagctcagccctaaccctagctccccgcctcgccgccgccgccgccgccgccgccgcaccgctccccggggagcgggacgtcgccgccgcggcgcctaggtgggtatctcccctcctctctctctctatcccgctccttgcttccttgtttgcctcgcgttgggttgggaagggctcgtgatcggggcgggggtctcctccctagggcttgcggcggtgggggcgatggggggatggtgcggtggatcggggtggggagggggatgaacgggcggtttcgtcttgtccgggcggccgatctgaggggggagcggtggtttggttggttggtctcgtccgtagtgttgattgcggtattgatgtcacaaagggaggaaacctcgtcctgagctggaattggctgtgtttgtggcgggtgcatcggtgtggatgactcaaaggggtgattgcgtgggttgggatgcgatgggaactctgttctggagatggtttactttgaagcaggaattctgttgattagatttgcgcatagattgctttggttgatccattatagtgcacttgtgcattgtgctggaacggtggaatgctatcttcaggttgcttacatgagtttactttgtttgcaggtgtggttgactcagcatatttgttccgtctgccagccgccgcccctagggatcgatggctgttgtcgatcctgttatgtttgacaacgacgacgaggaaggtccgatctccttcaagaggtcgagcacctctgtgaagaacaggcccacccccacaaagcaggagggctcatcagggaatgccggacctattaggagccctaaggctgttgcttccaatcaacagaagaatgggctgactggtgtttcgaggcctttgcaacagaggccgcagtcaagcagtccaaaccctcgacctttgggatcaggtcagccgaacagttccaaagaacatagtagccataatagtaactcagtggataagagtaaattgaaaagacctttcgtggaagataagtcggatgactcagaagatgaccataagccaatcggattaaggagaaaggtcgaggatagaaatttgaagaaacctgctgtaggaagtgggacagcaaatgattcagatgatgataaaccattgagtctcaagataaactcaacaaaaacgccttcgagtagtgcaaataaggctattgtactgaaaactacacctaaaattgagcaacctggtgatgattcagaggacgataaaccactggccagcaggttgccaactaatgctgctctgaaaaggggaggtaatgtttctgatgattcagaggatgagaagccattggctgcccgattttcgaaagttactggcaatgcatctgcaagtatctcaagttcaaaggacaaggtcctgtctgcaagtataaaagcaagttcttccagcaagatgtctaacaatgacgcgagcacatcacgaaattcaattaaaaggccaattgacaataataatcaaacaagttcagctctcaagaaggcgaggccttcagatgtttctgcgtctgcaagtgtcaaaagagaacccaaggcggatgacaatgacaatgtacctctttcacaaagactgaaaatgggtgagtcttcaaaaagcaagccacctgcaaagaatatcgtaaagaagagtccttcatctttaaagaaggacaacaagaaaatgaaaatgaaaatgaaaacaaagaaaacaatgaaaaattctcagttctcaaagacaatgaaggtccctcctggatctggtggtggacagaaatggactaccttggtgcacagtggtgttattttcccccctccatacaagcctcatggtgtcaagatgctttacaacgggcaacctgttgatctgacgccagaacaagaagaggtgagatatataacattagctgatttttactttacttttcatcttttgatttgtaccatgagtgacattttaatcaggttctcctgaatccatatcttgctaccagataattgttcctctactaattatctctgttacaggttgccaccatgtttgctgtgatgaaagacactgattatgcatccaagcaaacattcattgacaacttcttcactgattggagaaaaattcttggtaaaaaccatgtcatcaagaaatttgagctttgtgatttcaccccgatctatgaatggcacctaagagagaaggagaagaagaagcagatgacatctgaggtactgcatgttttgttttgacttattcagcagaatgaatttagtttttgtgctggtaatctataaaaagttgtctacggaagtgaacaatctttaaaattcttcttctgcaggagaagaaagcattgaaggaagagaaattgaaacaagaggagaagtacatgtgggctattgtagatggtgttaaagagaaggtatttttctttgtgctgcaaaaatgtagttacagaaagttatggctagtaattgtagatatttctcttgttccccattcttctgttattgttaggtaaatgttttttttattataatctagcaattgttttgttttaccctagcgttcaattttgtgaataattttgcaccagatgtcaacaatgcataccatgtgttatacttagtttgcttcatgacatgtaatgttgcctcgatgttcttattttttttttaacatacatgacagctgtgtcatcttctatctgctgtgcatactaggttcatttcgcataaaattactctgggttaaagtactttgttcctttcaggttggcaatttcagagtagaaccacctggcttgttcagggggcgcggagagcatccgaaggtatatatatggatacatatactcgtcgtgctgttttaagtaagcgacatcattttgatgcttttttattacatcgttttagatgggaaaactgaagcgccgcattaaaccaagcgatattacaataaatatcggaaaaggggctccgatccccgaatgtcccatacctggagaaaggtacgctggaaattttcccattacctttgatgtgtaatttatatttgtgaaggggttgctagtatgtgctcactctttatttggtcatgtgtactgcagttggaaagaagtcaaacacgacaacacagttacatggttggccttttggaatgatccaataagccaaaaagatttcaagtatgttttcttggcagcaagcagtgcattaaagggccaaagtgacaaagagaagtatgagaagtctcgaaaattgaaggtgagagggttcattgtttgtgtcatggagatgttgagtttgcatgtacaaataatttttttctgcttggtcattgcagcatcacgtacacaaaattcgtgacacttacacaaaggatttcagaagcaaagataagacaaagaaacaaattgcagtggcaacataccttatagataagttagcccttagggcaggcaatgagaaggtactttctaacctgagctctctgactgacatttatgaattgggatatatttcttctgctatcggtgcagattgcacagtaatctcccccaccaaccaaccaataacaaaaaaaaaaggaatatgtgccttctgttctgacatctcttctgaatggatatttacactatgcaacatagcgttttggttcaagactgtatctaggattagctgtgtggctgctcatcataattttgcataatggtcaacataatgcgcatagatttttgttagaatacaatcttcaacaatgacatacatatagtttattaaatagctttgaattacagtgacatacatagtttgtatacttagccactacttcaaattcttttcaggatgaagatgaggctgaaactgttggttgctgtacactgaaggttgataatgttacttgtgttcctccaaataaactgcaggtattggtcttcattattaataaattctgcatgtgtaacttgatttagatgatatctgatgttccataacctttacagttcgacttccttggtaaagattctataagatacttcaatactgtagaggttgaactgcttgtatacaaggcaattgaggaattccgtgctggtaactctgccctgcaactctttctttccctccgatcctcaccttgcactagtggaatcacttctgttttcttaatctttattctaggcaagaaaccaggacaagatctctttgacaaactcgatacaaccaggctaaatgctcatctaaaggacttgatgcctgggcttaccgcaaaagtgttccgtacatataatgcttcaatcaccttggatgatattgtaagttcagatagatcttcacatctttttcttaaactttcactgctgtatgaagtgattgattgaagtttgtaatggtttaagacattttagtagtatatatgttgttccgttctgtttacttgaagctcaagtgtgtaacgtgttatttcacaatagttgttttctgaacgtatgtctattggtgctgattttacagttgcacaaagaaacagaagatggaactcttcttgaaaaaattgcggtttatcaacgagccaacaaagaggtctattgtgtttctctttaagaaatagaaaaaacttatatttgacctgttttgatctcaaccatacttcttgtttactcaggttgctataatctgtaaccatcagcgtagtgtctcaaaatcacatgattcccagatgactagattgaatgagaagattgatgaattgaaggttgaatttctactgcaaatgattagcccaacattgtaccatttcattcttttgtccttttctggtaaactctcttgttttttttcttttctccaggcccaaagggatgaattgaaggcagacttgagcaaagtaaggaaaggaaagaatctaggcaatgacaaagatgggaaaccaaaaagaaatttggcccctgaagcgtaataatctcaatcacagatagatctctattttgtatatatacaaaaaaacaatgttgagaaatctcaccaaatttgcttgcaggtttgaaaagaagatatctcagattgaaaccaagatagagaagatggagatggataagaagattaaagaggatttaaagacagtggcactaggaacttcaaagatcaattaccttgatcccagaattactgttgcatggtgcaaacgccatgaagtacccatcgagaaggtaacagtgctttaggacaactctatttttctttccatatgaattggcctatgcaaagttgacaggcacatcctcattgttcttatcgagattacacttcattttatattgggggtgggattctgttcaactaaactataactgtgcatacaaaaaaacatttgatttgaaatcccggatatttgaaatgataatagtctgtcgtcattgcatcctgaacaaagtaaaattttcatttggcatatgatcaaatcaaatgattgaaccgattacattaactgacagtactgttcgccttgacagattttcaacaaatcactcattgcgaaattttcgtgggcaatggacgtcgacccggatttcagattttaagagggtacaagagcattggctactggtcatccggcctgtagtaaagttgatccagcttccagtccttgtcccggacactaatttgcagctaggaaaggaagagctcggtgtttgtttttgaagtcccctgctcctggaaagaaggaagcacccggcattctcattgtaggctttttttttcttttactacttgttggtgcctttgccatcggtcctcaagttctgtatgcatttgggctgaggaattttagctcgctgagaacgaatggacattcattttataccgaattaatctcaaatataccatgaggtttcgtttggttgcgg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067550.1 RefSeq:Os08g0154600]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 8]]
| |
| − | [[Category:Chromosome 8]]
| |
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Annotated Information
Function
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Expression
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Structured Information
