Difference between revisions of "Os08g0180300"

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(Created page with "{{JaponicaGene| GeneName = Os08g0180300| Description = DEAD/DEAH box helicase, N-terminal domain containing protein| Version = NM_001067673.1 GI:115475082 GeneID:4344820| ...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os08g0180300|
 
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Description = DEAD/DEAH box helicase, N-terminal domain containing protein|
 
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Version = NM_001067673.1 GI:115475082 GeneID:4344820|
 
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Length = 7687 bp|
 
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Definition = Oryza sativa Japonica Group Os08g0180300, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
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Please input expression information here.
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AP = Chromosome 8:4699671..4707357|
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CDS = 4700819..4701419,4701526..4701699,4702382..4702458,4702553..4702627,4702714..4703710<br>,4704261..4704391,4704931..4705149,4705649..4706152,4706259..4706468<br>,4706953..4707057|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008401:4699671..4707357
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source=RiceChromosome08
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008401:4699671..4707357
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source=RiceChromosome08
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgcttgctggcaatatgaacaacgataactatattgacttgagttcagacagtgatatagattttgacttcgactcagatgattcagttggtggtttggaccaggagctagcttcatcttcttctaggcctactgaaaatataaatggtcaatatagaactctgccaccttcttttacaaatggtagacatgttgataacgctcgtcatgcgttaggttcaggtgacagagcttatccgcattcaagttcttatagggggtcaccaaatgattctgcaagggcaactcctgcttccaacagaactgatattgtagtcaagaagcacaatggttttgcatcggaagaaaatgataatggcaagaggattcttccctcatccttttcaaatggccgcacaacaaatgctatgcatccagtggttgcaagtgagacacgcaaattcccaccatcttttaccaatggaaattcacaaagattggctgaaaataggatgggaaaaaatgttgccaatggaattggggagccttcatcgtcaaggtttccgagccgaagttcttttggtactgacaacaagaaggtcatcacagacagtgacaatgaggatgtctatgtatatggaagctccagttcacatagggttcttcctccatcttttggtcgcaatagttctgctaatcacagcgaatttgctaatggcattgatatgcaaggtcgtctgaacctggaaaataggattatagattctgacgagagagcggtgtaccaggaagcactacagaatattatccaggataaaagggaagatgatctgcctgagggtgttctgtcagtacctctgcttaggcaccagaaaatggcattggcttggatggtttcgaaggagaatagctctcattgtgcaggtggaattcttgcagatgatcagggtcttggcaaaacagtgtctacaattgcccttatacagaaacagaggatccagcagtctaagtttatgtctgttgattcagatcgtttaaaagctgaagcgctaaaccttgatgatgacgatgaggcagcgcctgttgcggataataagggggagcagactaagaatgatgaacccaggaaggatctaggagctggttcgtcatcaacagcagctggtactggtgacgttgaaacatgtgctagcctaatgaatactgctccagataagacggttgaaagaaatgttgaacgtaagaagaagagtaaggcaagcacatcatctactatgcaatccatgacaaggcctgctgcaggtactctagtggtgtgcccagctagtgttcttaagcaatgggcgaacgaattgactgacaaggttggtgaaagtgctaaattgtctgttttggtctatcatggtggctcaaggaccaaagatccaaatgagttggcaaaatatgatgttgttatcactacatacacaattgtggccaatgaagtgcctaaacagaatgccgatgatgacactgatcagaagaatggtgaagaatcttctgctggtaataagagaaaacaaccacccaaagcacagagcaagtcgaagaaaaagaaaaagaaacttaaggattcagacatttaccttgccagtggcccagttgcaagagtgcgatggtttagggttgtccttgatgaagctcagacaataaagaactttcgaactcaagtggctaaagcctgttgtggattacgtgcaaaaagaagatggtgcttatcaggaacacctatacaaaatgcaattgatgagctctacagctatttccatttcttgaaatacgatccatattctacttataattcattttgtacaatgataaagcacccgattgctagaaatgcagttcatgggtataagaaacttcagactgtgttgaggatagttctcctgcgccgcacaaaagaaactctgattgatggtgagccaatcataaagctacctccaaagacaattaatctggataaagtagattttacaaaagaggagcgagctttctatttgacgctggaagaacgctcgcggcaacagttcaaggcatacgctgctgctggtacactcaaacagaactatgccaacattcttctaatgctgttgcgccttaggcaggcctgcgatcatcctcttcttgtgaaggggcatcagtcagagtataaaggcgatggttctatagaaatggcaaagcaacttcctaaagaaatgataataaatttgcttgcaaagctggaagttggagagttttgttctgtatgcagtgatgtacctgaggatgccgtcgtgacgatgtgtggccatgtcttctgctatcaatgtatatacgagcggataactactgatgagaatatgtgtccctcccctaattgtggaaacacattaagtaccgattcagtattttcgtcaggagcgttaaggatttgcatgtctggtgtatccagttctcatgcatcagggagttcatcattagatgacgagtcatcttctattagtcaaactagttacatatcctcaaagatacaggcggcaatcgatatactgaattcgatcattaacacctatgcccttaccgacagtgataccgtcgaatcaaatcctagccgagtggccccagtgaaagccattgtgttctcccagtggactggcatgctggatttgctggagctttcattgaatagcaatctcatacagtacaggagactagatggaacaatgtccctcaattcaagagataaagcagtgaaagattttaacacagacccagaggtcagggttatgatcatgtcactgaaagcaggtaatcttggtctcaatatggttgctgcttgccatgtaattctccttgatctttggtggaatccttatgctgaggaccaggcaattgatagagcacacagaattggtcagactcgtcctgttactgtctcccgtttaaccattaaagatacggtggaagatcgcattttagctctgcaggaggaaaagagagccatggttagctctgcttttggcgaagacaaatcgggtggccacgcgactcggctcaccgtggatgatctgaagtatctatttaggttttga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MLAGNMNNDNYIDLSSDSDIDFDFDSDDSVGGLDQELASSSSRP                    TENINGQYRTLPPSFTNGRHVDNARHALGSGDRAYPHSSSYRGSPNDSARATPASNRT                    DIVVKKHNGFASEENDNGKRILPSSFSNGRTTNAMHPVVASETRKFPPSFTNGNSQRL                    AENRMGKNVANGIGEPSSSRFPSRSSFGTDNKKVITDSDNEDVYVYGSSSSHRVLPPS                    FGRNSSANHSEFANGIDMQGRLNLENRIIDSDERAVYQEALQNIIQDKREDDLPEGVL                    SVPLLRHQKMALAWMVSKENSSHCAGGILADDQGLGKTVSTIALIQKQRIQQSKFMSV                    DSDRLKAEALNLDDDDEAAPVADNKGEQTKNDEPRKDLGAGSSSTAAGTGDVETCASL                    MNTAPDKTVERNVERKKKSKASTSSTMQSMTRPAAGTLVVCPASVLKQWANELTDKVG                    ESAKLSVLVYHGGSRTKDPNELAKYDVVITTYTIVANEVPKQNADDDTDQKNGEESSA                    GNKRKQPPKAQSKSKKKKKKLKDSDIYLASGPVARVRWFRVVLDEAQTIKNFRTQVAK                    ACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKYDPYSTYNSFCTMIKHPIARNAVHG                    YKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINLDKVDFTKEERAFYLTLEERSRQ                    QFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGHQSEYKGDGSIEMAKQLPKEM                    IINLLAKLEVGEFCSVCSDVPEDAVVTMCGHVFCYQCIYERITTDENMCPSPNCGNTL                    STDSVFSSGALRICMSGVSSSHASGSSSLDDESSSISQTSYISSKIQAAIDILNSIIN                    TYALTDSDTVESNPSRVAPVKAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSR                    DKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIG                    QTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLTVDDLKYLFRF                    </aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
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DNA = <dnaseqindica>1149..1749#1856..2029#2712..2788#2883..2957#3044..4040#4591..4721#5261..5479#5979..6482#6589..6798#7283..7387#gcttctcggggcgcctcctccacctgtctcgcctccccctccccctccccctcccaggaaactccgtggcggcgacctcccccaccgccgccgccgccgccgccgcagccgcagcctccggcgccgcctcccaatccgggaggatccctccggacccgccgattccctcgccgccgcccgtgtcctcccgccgccgggatcgatctccgcggattcgacggcttcatcgaggtatcctcgtatgatggctcctccccccccccacgtagcggctcctttcgagggggttggttggttggttggttggttggtcgggggggtttgaggtttgaggccccgatgtttgtttgggcgtgccgtgtgggggaaggtgtgggagttttttttttcctcgcgtgtaatttttggcggtgttggatcgggttatgggggatagctgggaggttagcgaggtttggggtgtgtggttgggatgggagattggttgatcccgtcgattaggggtgtcccgcggcgagatttggtcccgttgcgcatttctgtttttctttttttgaaatgacctgattaattcaatccagttcgtagggtgtagctctctgtctggatcagattaggctttagtttatccatgtgtgattgcttcctagatttgaactggtcgggagtgtaccatgtgaatactgctttcgtatgaactgtgcggttactaacttccattcctaattaatatgactaatttttagggaagaaatgacttggtacctatgctagtatttttttcccctcatggataatgcttgataacgactttgagaagggcaaataaattcctaaaaaatgtttagcgttgctgttttttttttctttagtgttttctcacagttcaatatttactcatctacaccattatttgatccaccttgcaggttaagtcagcatagctaataactccgtctactgttgtgacctctgtggtttgctttgtgtgtttggcttcccaatcatctgcataaaccaggaagtgggtttgctttggaaatatttggggtcaaactagtagttggcacattgtgatctgatcatgtttatgcacagtttgtactgctaagcacaattggagttctgactatacagatgctgtgcgcatgcttgctggcaatatgaacaacgataactatattgacttgagttcagacagtgatatagattttgacttcgactcagatgattcagttggtggtttggaccaggagctagcttcatcttcttctaggcctactgaaaatataaatggtcaatatagaactctgccaccttcttttacaaatggtagacatgttgataacgctcgtcatgcgttaggttcaggtgacagagcttatccgcattcaagttcttatagggggtcaccaaatgattctgcaagggcaactcctgcttccaacagaactgatattgtagtcaagaagcacaatggttttgcatcggaagaaaatgataatggcaagaggattcttccctcatccttttcaaatggccgcacaacaaatgctatgcatccagtggttgcaagtgagacacgcaaattcccaccatcttttaccaatggaaattcacaaagattggctgaaaataggatgggaaaaaatgttgccaatggaattggggagccttcatcgtcaaggtttccgagccgaagttcttttggtactgacaacaagaaggtcatcacagacagtgacaatggtttgtatacctagtctcaaatgattgtaattcattcttacagttgcttgaaatctgtccaggttttctctgaaaaactaatgtttcccctttttgtgtttgccagaggatgtctatgtatatggaagctccagttcacatagggttcttcctccatcttttggtcgcaatagttctgctaatcacagcgaatttgctaatggcattgatatgcaaggtcgtctgaacctggaaaataggattatagattctgacgagagagcggtgtaccaggaagcactacaggcatgtgttcctttgttcctagttattgaggcaattttgtatgattgagttgtttttcttctacgttttctgaatcaaattggagagttgatttgatagataatataaacagttggcaccataatgtttttttcctagttcatcaataatcaaaaggatactcttgtgacgtgaagagaaccacagatagctagtttggtgttaagttgtttaaatttgcaaatttgtttagatttgctcattatcaatctcctgggttcctcagtttgctcctcaaattatttggttttctgacctttgaacatactatagctgccctcaatttttttgacctgttttgtccttgaaaaaatcatactatttattctccattcttcaagtagaaagatagaagttctttgaagatgattatacatacttctaattttacttcaaacctgtttcatattttgttttgatttttttttgttgaattatattgcaatcatgaaagttgtatttttgttttttgaatgaggcatataaatttctcatttgtatgtttatcttgtccatgacaagtttttatccagtctaggatacattttccaggtagaagttatgtactttagtgattgaggtatatgttggtctttattttgagtctgctttgtgatatttctttttatactatgttatacagaatattatccaggataaaagggaagatgatctgcctgagggtgttctgtcagtacctctgcttaggcaccaggtaaatatttctcacataatattaattatttattggcttactttatgattgatagtgtattccatgttcattacataccttttctttttgaaagaaaatggcattggcttggatggtttcgaaggagaatagctctcattgtgcaggtggaattcttgcagatgatcaggttacttctgatttcacaacttcttgacaaagatcaatttcttattgtgttaccatccttaaagtcgagcagttttcttttaacagggtcttggcaaaacagtgtctacaattgcccttatacagaaacagaggatccagcagtctaagtttatgtctgttgattcagatcgtttaaaagctgaagcgctaaaccttgatgatgacgatgaggcagcgcctgttgcggataataagggggagcagactaagaatgatgaacccaggaaggatctaggagctggttcgtcatcaacagcagctggtactggtgacgttgaaacatgtgctagcctaatgaatactgctccagataagacggttgaaagaaatgttgaacgtaagaagaagagtaaggcaagcacatcatctactatgcaatccatgacaaggcctgctgcaggtactctagtggtgtgcccagctagtgttcttaagcaatgggcgaacgaattgactgacaaggttggtgaaagtgctaaattgtctgttttggtctatcatggtggctcaaggaccaaagatccaaatgagttggcaaaatatgatgttgttatcactacatacacaattgtggccaatgaagtgcctaaacagaatgccgatgatgacactgatcagaagaatggtgaagaatcttctgctggtaataagagaaaacaaccacccaaagcacagagcaagtcgaagaaaaagaaaaagaaacttaaggattcagacatttaccttgccagtggcccagttgcaagagtgcgatggtttagggttgtccttgatgaagctcagacaataaagaactttcgaactcaagtggctaaagcctgttgtggattacgtgcaaaaagaagatggtgcttatcaggaacacctatacaaaatgcaattgatgagctctacagctatttccatttcttgaaatacgatccatattctacttataattcattttgtacaatgataaagcacccgattgctagaaatgcagttcatgggtataagaaacttcagactgtgttgaggatagttctcctgcgccgcacaaaaggtgataaaaactttttttattccatatgttttctgctgttccttttttgcctatatactagcttaggatatttcattgtaaggaagcaatttcaaccacaacacatagcattctttgttgctacagattacagaaacacgcttaacactctgcatgtggttaaacatctactagggtctgtatttgctattgtggtggctttgtattaaattgatatatgccatacaaacattaggtagacaggttcgatcaatttaccttaattgatgagcagatagtggaaagttatgatatttccttttttttcgtcaatataaaggacactgcattacaattgcttgccagttgccattttactacaagtcctcactcctcagctacttgtttctactcagtatgctatacctcctttctctttttcaaagaaatttgatatggttacattattgttgcaagatttttaatagcatattaatgctagtatgttactctagtttttcctttgattaaattatctgtcgttgatcacatgttaccttgttttatgtagaaactctgattgatggtgagccaatcataaagctacctccaaagacaattaatctggataaagtagattttacaaaagaggagcgagctttctatttgacgctggaagaacgctcgcggcaacagttcaaggttggttaaattttaaagtcaaacttttctgtggacggcctccgtatagtgtagatttgtgttgcatctggtattccgaattctagtcatgaaatgccattttggtcatgcatcgactaaactttcaaaactttgaaaatttatatttggattgtatacatgatagacacccatggagatttgtcatgtgaaggcacttctcataatatcataattttattgaggtttacaaatattataaaagttagtggtcaaatttgcatttttgaacaccacgtagatgtccaaaatgacattgatgtgaccaggagaagtgatgttaaatcttcaacattactgaatttccttttgtcctggaggctggagcaagtatgtgtagaatattgttgttatgatccaacaaagtttcctcatgcttccattgaaccattgtctcatatcaaatgttataaagtggatgttaatttgtgttcccttctgattactggagatttcacaagtgtagtttctgaatgctgatatattgtgatccatttcaggcatacgctgctgctggtacactcaaacagaactatgccaacattcttctaatgctgttgcgccttaggcaggcctgcgatcatcctcttcttgtgaaggggcatcagtcagagtataaaggcgatggttctatagaaatggcaaagcaacttcctaaagaaatgataataaatttgcttgcaaagctggaagttggagagttttgttctgtatgcagtgtaagcaatctaatctctctccattatgttgaatctgacctattctctctccattatgttgaaatgataatacacgtaatcaccagtattattgttgttattgtctggggctgtgtgtgtatgtataggcgcacaacctccatgcaacatatgaaaaattgtgtagtcagactgaaacataaatttgtcctacctatatcctctgttatttcgtgtccttggaataaaatcataatatgcattgtggaggggcagtggatgctaattaaatgataacaatgatagaatatctgataacctgaatcagcccaactgttcatatttaacgagaaaacaccttggggttattgcatccagagctacaatgccgcaatgccaagctgtcaggctatatgtttttgcaaatatccttgcccttcttgtttctatatctttggacaatctaattactggtgtaattcaatcttcttttgcaatctttggacttcttttacggcaggatgtacctgaggatgccgtcgtgacgatgtgtggccatgtcttctgctatcaatgtatatacgagcggataactactgatgagaatatgtgtccctcccctaattgtggaaacacattaagtaccgattcagtattttcgtcaggagcgttaaggatttgcatgtctggtgtatccagttctcatgcatcagggagttcatcattagatgacgagtcatcttctattagtcaaactagttacatatcctcaaagatacaggcggcaatcgatatactgaattcgatcattaacacctatgcccttaccgacagtgataccgtcgaatcaaatcctagccgagtggccccagtgaaagccattgtgttctcccagtggactggcatgctggatttgctggagctttcattgaatagcaatctcatacagtacaggagactagatggaacaatgtccctcaattcaagagataaagcagtgaaagattttaacacagacccagaggtccctattttctgtttccactctcttttttactaccttgtttctcttattactttcagccattcattcagcagttattctgaaaggaatccttttgtatcctcaggtcagggttatgatcatgtcactgaaagcaggtaatcttggtctcaatatggttgctgcttgccatgtaattctccttgatctttggtggaatccttatgctgaggaccaggcaattgatagagcacacagaattggtcagactcgtcctgttactgtctcccgtttaaccattaaagatacggtggaagatcgcattttagctctgcaggtaatagcttgtctttcatttgcactgtgctttcataaacttgtctttttcctacttagataacaataacatacgcctcttttttttttttttttttttttgagggatgagttatactagtagcattgatattctcaaatcgtgtcagcgttcattcgatgcttgtacttgaatatgtcgtaggtgcttgaaattcaagcccagcttttcaaaactttaatgtgatggttggaaaatgaacagggcagctgatagtgcaagttgtaatattcttgttattgttattttagggggtgttagttgtgtaccgataactaaacaactttaccgaggttgatttaatactttttttttatcgatcatgggggttaagacaacaattttgattgcataatctcatgtagatatgaattatcttgacacaaccaacatccctgataatttgggggtatgctcgtccaatgatgtttccgcttctttacaggaggaaaagagagccatggttagctctgcttttggcgaagacaaatcgggtggccacgcgactcggctcaccgtggatgatctgaagtatctatttaggttttgattggaagcacccgtgatctctgcgatacaatgacattgtatagtagcctgtgatctttgcctagatgcaactccaacagctgtgtaccgctgctgagtattttggtgcgaggtactgcggatttgtgtccttccatggctcgcagcagctccagttttgtcatgctctgatttgctagacgaaatgtagtaggcttagtcgctagcctgtgttgaatatttgaccccagcttgtaggagaattctgccattgctccctgttttatcaagagatccatctggtggtgtatatatatgtgcc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067673.1 RefSeq:Os08g0180300]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 8]]
 
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[[Category:Chromosome 8]]
 

Latest revision as of 12:57, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

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Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information