Difference between revisions of "Os08g0451400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0451400| Description = AT-rich interaction region domain containing protein| Version = NM_001068481.1 GI:115476699 GeneID:4345728| Length =...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
{{JaponicaGene|
+
Please input one-sentence summary here.
GeneName = Os08g0451400|
 
Description = AT-rich interaction region domain containing protein|
 
Version = NM_001068481.1 GI:115476699 GeneID:4345728|
 
Length = 9742 bp|
 
Definition = Oryza sativa Japonica Group Os08g0451400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
|
+
===Expression===
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
+
Please input expression information here.
AP = Chromosome 8:22126941..22136682|
+
 
CDS = 22127136..22127264,22127361..22127451,22127536..22127636,22128640..22128738,22128863..22129000<br>,22129100..22129675,22130144..22130317,22130402..22130537,22130941..22130972<br>,22131970..22132026,22132120..22132372,22132463..22132551,22133018..22133071<br>,22134048..22134239,22134312..22134476|
+
===Evolution===
GCID = <gbrowseImage1>
+
Please input evolution information here.
name=NC_008401:22126941..22136682
+
 
source=RiceChromosome08
+
You can also add sub-section(s) at will.
preset=GeneLocation
+
 
</gbrowseImage1>|
+
==Labs working on this gene==
GSID = <gbrowseImage2>
+
Please input related labs here.
name=NC_008401:22126941..22136682
+
 
source=RiceChromosome08
+
==References==
preset=GeneLocation
+
Please input cited references here.
</gbrowseImage2>|
+
 
CDNA = <cdnaseq>atggctcaaatccaaagcagctcactggtgaactgcacgctgcttgcggtgctatgtgggaaggttacagacaaacagcagaagccacctggtctggtgcccgaggtgaagcgaccacggctttcatatccattcccagagctgatctcgtctgggagattggaggtgcatacgctgatcaatcccacagttgatcaattccggaaagcgcaacaggctgtgcagcccaacttgatgtacctccagggtcagcagcttgagaatgaggaagaaattggtacacttgtctggggcgatgctgatgtatctgatccacagatatttagttcactcattagtccaccttttccgaccatagtttatttggaagttcctgctggggaaaagcttgctcaatctcttcagttaaaggggattccatatgtattatattggagaaattcattttcatcgtatgcagcatctcattttcgccaagccttgatatcagttgttcagagctcctgcagccatacatgggatgcatttcagcttgcacaagcttcttttcgactgtactgtgcaagaaataatgatgcgcaaagtgttaagcttgggcctcgtttactaggggatgctccaaagataaatatcttccttcctgagaatgaaatggttgaggaagaaggtagctctgaacattttccagccataaagatatatgatgaagatgtgaacatgaagcttcttatttgtggagcaccatgcatcttggatgctagtttgttgggctcactggaggatggtttgaatgctctgctcaatattgaaattcgagggtgtagactccagaacagagtcagtgctgctcctccacctcttcatgctgaaactcttccacatggggtggttacaatgcgttgtgatatcacaacatgcagttcttcacacgtgtcattgcttgtttctggcagtccgcaaacatgttttgatgacaagcttttggagaaccatattaaaaaggaaattgttgagaagggccagttagttcgtgctgtcttagttagggaggacgacaaaccatcttcagttgagcctttgacttcgatatctgtggcttctggagcttctacttttgaagtctggatgaccctacctaagtgggcaggacaggttttgaaatatcttgctccggaaatctcttacaaaagcctggttccacttggaattgcttgtgtaaatggaactccagtttcttcgtttgatagacaagatgtggatcggcttcttttcttttgcaaaaatgaagctattgtaaatggtctatattctcatctgccaagatggtcagcatcccttgttaaggacagactgaagggaactccagagtcaaaatcaagtacttttagtgcaaatggagttggagagtaccagaaacatccaatgaaagggacttccctagtagtcaaaccaaagctgaaatctgcaaaaatgaggcctattccacactcttcgaagcggcagatgcacccttttgtgggtatccctccgtcctttattcatgatgctagtcaagttaagcctagcttgccagcacctccggtaaggcataatgcattacctgttgctccaacaactcaaagaaaattatcatctgggacatcacgtgttgaaccagctgttccgttaaatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaagaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttgttcctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgatttatataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaattggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgacgggtgttggaaacacgttaaagagacattacgagacatacttgttggaatacgaactttcacatgatgatgtcggtggggaatgctgcttactctgccacagtagtgctccaggtgattgggttaactgtgggttgtgcggtgaatgggcgcactttgggtgtgatagacggcaagggctaggcacattcaaggactatgcgaagacagatgggttggaatatatctgcccccactgcagcctcgcgaactataagaagaagccaccgcctcccgagagtgctaatggcttcagaatagcatctgcacaacggaatatttaa</cdnaseq>|
+
==Structured Information==
AA = <aaseq>MAQIQSSSLVNCTLLAVLCGKVTDKQQKPPGLVPEVKRPRLSYP                    FPELISSGRLEVHTLINPTVDQFRKAQQAVQPNLMYLQGQQLENEEEIGTLVWGDADV                    SDPQIFSSLISPPFPTIVYLEVPAGEKLAQSLQLKGIPYVLYWRNSFSSYAASHFRQA                    LISVVQSSCSHTWDAFQLAQASFRLYCARNNDAQSVKLGPRLLGDAPKINIFLPENEM                    VEEEGSSEHFPAIKIYDEDVNMKLLICGAPCILDASLLGSLEDGLNALLNIEIRGCRL                    QNRVSAAPPPLHAETLPHGVVTMRCDITTCSSSHVSLLVSGSPQTCFDDKLLENHIKK                    EIVEKGQLVRAVLVREDDKPSSVEPLTSISVASGASTFEVWMTLPKWAGQVLKYLAPE                    ISYKSLVPLGIACVNGTPVSSFDRQDVDRLLFFCKNEAIVNGLYSHLPRWSASLVKDR                    LKGTPESKSSTFSANGVGEYQKHPMKGTSLVVKPKLKSAKMRPIPHSSKRQMHPFVGI                    PPSFIHDASQVKPSLPAPPVRHNALPVAPTTQRKLSSGTSRVEPAVPLNPLPMKKHGC                    DRLPIGICSEEDFLKDVMQFLLQRGHTRLVPQGGLAEFPDAVLNAKRLDLYNLYKEVV                    SRGGFYVGNGINWKGQVFSKMSNHTVTNKMTGVGNTLKRHYETYLLEYELSHDDVGGE                    CCLLCHSSAPGDWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGLEYICPHCSLANYK                    KKPPPPESANGFRIASAQRNI</aaseq>|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
DNA = <dnaseqindica>9419..9547#9232..9322#9047..9147#7945..8043#7683..7820#7008..7583#6366..6539#6146..6281#5711..5742#4657..4713#4311..4563#4132..4220#3612..3665#2444..2635#2207..2371#cgcaccaatctcaccacatcaatccacatggcgtcgcgtcgcacgctccccgattccccccacccaaattccttcctccgatcaccaccggaaccaaccaaacccaaatcgccaaaacaacatacgatcgcaactaggctgtgctgtggccaaaaaaaatctaaaaagcactcgtgcagcagcagagaatcagagagaaggaagaggaaaaaaaaaccgcagaaaaagaattcgtataatttcctcccaacttttcctcgcgatcccgctgcgaaaagaaaaaaagctaatttaatccgtgctctttgtttttattcctctccgcaggtaaatgaatcatcgccgcggtcgtcgtcgccgtcatcatcatcatcatcatcctcgccacgaggggaacaggaagcgcaggagggatcaagcaggagctgtggattccgcttccgtgcacggtacgactacgatctccagtggctcgagcggttcgtcccggccaatcaaaatatttcctggagattgctacttgctcggttatttattatttgaggggtttgcattgctaatccgcggagggattaagacggggaggagggttggtggatttaggttaaaattccagtggttttccttttttttggttagacagatagattctttttttccggagtggttgactggatttgattttgacgggatgggggtcggctcgcgtgcgattcaccacgcgtttattcccctctcgttctgtctgtattattaatgattcgaagagggggatttgtgcggcggctaaattagggttccatgctctctcgcctccacgcttttgccctagccgtcgccgcacaaatcgagcgcatcctgccgccggtgtcatagcggctcggagtcgcggggttttgggctgcgctcgtcgatttgggtctcctggtatggttgctcgattcgattcggttcggttcgcttggttcgatttggtgcttgtttgttctgattttggctggaaatttcgtgaagggagttgcagttttcagtcacctgaaatattcaattttttcagtcatttttttaagctgttcggtttgctttttggtccgtgcactggtttagtgatctcagcttcatgaacatctttacttgtcccattgtgccatgcagtatgttggtgaggcctgtatgtgaatcgattttggttcaggtgtcagttagttgattgcgatttgtagtttgtatgcttcgcgaagtgctcatcgttatgtcttgcagtttatatgtttgtgcaattttaaaataaaccaaatgcagttattagggaaaccataggtaaaagaaatttttttatgccctggtaaataaagataatcaattcaaaattgcacattgtgttgatatttttgaattgcacattatagtgctatttccactgcaggctaatgcaattattgtactgttggatgttcattcttctcttgtagatggttccagtttgcatttgtcgaatgcagaagcatgttaatttttcttgtatcaaattttacggtggtattggagttgtaaattgaaaattacatacacatgttatattttgcgattggcaatctatcacagtaaagtaatgtttgttcagctagcacagatttacccatacagttttaggaaagaagtatgaaggagtaacaaccaaaagtgttacacaaatatattctttcttcctgggctaaactagcagcaattaaatctcgccggaagagcggaaatgttcctgacacattaagccggtgtttaaagcccacagaacgaggaagccaatcctctggacacaagcaaaagaccaaactacttaccaaactgttctttttttttattattttgtaatgggcccacttggaattgtaaccattttgtttgattcaacatagcatggacaaactgctatcattggatgtgcagatccaaaggttgcaaatgtgactgacacattttaaattttcaggtgactgaaaactagacgaccaggaattgctagttctcagtcacccgaaatatttaacctttcagtcaatctcttaagctgttcagtttgctttttgatccacgcactggttcgggtgatctcagtttcatgaatgatttgctgttgctagtggtgttgcagggttcaatggtggagtgagctgaattggggagatgtgattttaccggttcagccatggctcaaatccaaagcagctcactggtgaactgcacgctgcttgcggtgctatgtgggaaggttacagacaaacagcagaagccacctggtctggtgcccgaggtgaagcgaccacggctttcatatccattcccagagctgatctcgtctgggagattggaggttagtaggcttttgctgtttactgtggtgatgcatttcttttgttgtgttatgaaccggctcgggatgcaggtgcatacgctgatcaatcccacagttgatcaattccggaaagcgcaacaggctgtgcagcccaacttgatgtacctccagggtcagcagcttgagaatgaggaagaaattggtacacttgtctggggcgatgctgatgtatctgatccacagatatttagttcactcattagtccaccttttccgaccatagtaagcaccaaactcttagctagcaacaatgttggtcagcgctcttagctttcaattaaatgataactgatactaccataagcttccgtttcattgtgctgttcgattttatttatgtgacagacatttatactccctccgtagaaaatgttgggcaattttcttagggcttctataagaatttgtgggacacacatatttcccgaaacactttttatgggttcttttcctctaataccttgcattaactgttgagatgcatgtcaatactggtgctggcatgcttaagaggcaaaagcaatgcttggtcacgtacttaagaggcaaaaaaatgaacaaatgtggatgaatcagaagttgtataatactctctttggactgataatacttgtcgctttggacaagggcacggtctttaaaaacaactttgaccactattttttattactatatatatatatatatagaaatatcaataaatatatgattttattgaagtactttttaagatcagtctatatatatggtcaccatacttctaagacaaatattttagatgttatttatagtcaaagtttttaaagtttgacaatagccttgtccaaaacgacaagtattatcaacctggagggagtaggatttatctaacctcagtttgattcctcaaacactccacaattaatttaacaatcgtattccgtcaacagcttaaacatgtaatcacaacacaaacgcaacacaacagctccaacttggttcttaaaactgatattccaatattttgtttttttaatgcccataacttgatttacatattccacttatatttgtctgacttgtagctactaacattttattttttaaaaccttatgctccttgtttttctgttttgtttcataaacggttttcttttccaatttttccatggtcgtcttccttctatctatttatcttactgtctaagcttttatacaggtttatttggaagttcctgctggggaaaagcttgctcaatctcttcagttaaaggtagtttgttttgtgatattttcaattagttttttttaaaaaaatttgtgaacaggttgtggattgttccatatgtctttttgccacagttgtgaatctgcttgttgggatgcatatatacttgtaaatatccaaatgattcctcatacttttttttaaaaaaaaaattgctctgatgtgtagcatgagcttagtttccataaacaattactatactcaaactgcatttgtttagtttattttgtctagcataggtgttgttctattgttggaatgtttatatcattatatgcttgtaagatgagcaattgctattcatttttcggcaagatgattgctaacatttacaaattttttttgcagttttactgagcttttttctttcaacaacaattcctactctcctattacttcagaatcttatttgtgattttggaatttgtgtttttgacactttcattcccaggggattccatatgtattatattggagaaattcattttcatcgtatgcagcatctcattttcgccaagccttgatatcagttgttcagaggtatcatattcatcatgtctttgttgtatgtatcgtaagtcccatttagttttgttttttcatccaataatcgagtgttcctttatgtagctcctgcagccatacatgggatgcatttcagcttgcacaagcttcttttcgactgtactgtgcaagaaataatgatgcgcaaagtgttaagcttgggcctcgtttactaggggatgctccaaagataaatatcttccttcctgagaatgaaatggttgaggaagaaggtagctctgaacattttccagccataaagatatatgatgaagatgtgaacatgaagcttcttatttgtggagcaccatgcatcttggtaagcgttagtggtcatgcctaaatttgtaatattttcttatatattattgcatttttcttatcccaaccaatacttccatctcttttacaggatgctagtttgttgggctcactggaggatggtttgaatgctctgctcaatattgaagtatgggtccattcttgtacttaccatgtgttgctttatttctgcatagaagtgctgagttctgaatagtataccccaacaatctagttcatggaaatgctagttgattggagtaatgaactatgagtctgttagcttacggattataagtatgcattattgcagccaacaagtattgtgacttgtaggcaacctatactggctggtggggctgggtcccaaagtccatactccatagtgccatggctatggagtagattgatgatacagcttggttgcaatctcattttctgagttgtgaatttgcattctagagtatgttgcacatcctatggtgaccggattcgtggttcaccgccacatcccacgaccctggttcatcatctcagtttgtggttcatggttgatctggttcatcatcccaatcaatggttgagtcacgaatggcatcactgttctctatggtttctggagaaggaatagtattggcagggttggagatataagtgggctgtctggttgacagcccacctagtatcttctttttgctttatgtcctttccacatcttttctttcattatacactttgtgttatgtattttatgcgcaatttacataaaaatagctgtagattgggtaatccaccaaaacaatttacataaaaatagctgtagattgggtaatccaccaaaaacttagtggtggtgatggtgactggtgagtctgccatcccatcacctcctatttagttggtaggatcttctggtttgtcaatttcaatttctggttgatgttggattgcgaattgtatatgtttttttttccaagaaatatatacgactttaaagtttagaacatatatttgttgattattgcaagacactggtattcagctagtaccgttgtatgttaatatttatgcaccatgaattttgtagcaagataatatggcacatactgcctgtttaatgtttgatttttcccctttttttccagattcgagggtgtagactccagaacagagtcaggtaccttcagctgcagtgtggcatatataatatatattcaatatctggcaacctgttgtgtcttataaatactagctcatgtgtgagtcatgttcttttaccacaaatttaataaagctcaaactggtggtatatcgaataaattaactaatcttgatttgtgctgcctataatttaaaggttaactgcggcgatatttccctaaagaaaaaactaaatggtagccagattaaatgcttccatcggtgtcttgtaaactatagtcacaatagagtatttaacactatctttttgtggtcatatttttaagtgatgctgctatccttattttgtagttccacgtcattacttggttgctagagatgtttagttggtttctactctcaacattttctcttttcagtgctgctcctccacctcttcatgctgaaactcttccacatggggtggttacaatgcgttgtgatatcacaacatgcagttcttcacacgtgtcattgcttgtttctggcagtccgcaaacatgttttgatgacaaggtatggtttctgtatttatggagcattttttagtcttcagtttgatatttacagtgtcatatgctgcttcatggaattttgtagcttttggagaaccatattaaaaaggaaattgttgagaagggccagttagttcgtgctgtcttagttagggaggacgacaaaccatcttcagttgagcctttgacttcgatatctgtggcttctggagcttctacttttgaagtctggatgaccctacctaagtgggcaggacaggtttgttttcttcaaaaagttgaagtagtgtgctgaacacaacttggtaatatgtgtaaaaaaatacccactaatttccccatggtcttttgtgtcattttttttggatatcatgttgtccttttgtggacgataaatcctgtcaagtatctcgttcttcctctgcagttgtctgtactttggtttcatcagtaaagctgggaacaccttttgtttgttaaaaaaaatgggctaaaaacacatgtatcaggaaacagaagtggtttggacattttaatacataatatgactaccaagacccctatgctctttaattgtatcaccaatctttcttgacaagtcaaacctcaatgtgtgaactcaaccatatggtgttttataccattgtggattctaattatctttccttacatggttatgttcaatggatcattcatcactaactgaagattgttttctactgtctaggttttgaaatatcttgctccggaaatctcttacaaaagcctggttccacttggaattgcttgtgtaaatggaactccagtttcttcgtttgatagacaagatgtggatcggcttcttttcttttgcaaaaatgaagctattgtaaatggtctatattctcatctgccaagatggtcagcatcccttgttaaggacagactgaagggaactccagagtcaaaatcaagtacttttagtgcaaatggagttggagagtaccagaaacatccaatgaaagggacttccctagtagtcaaaccaaagctgaaatctgcaaaaatgaggcctattccacactcttcgaagcggcagatgcacccttttgtgggtatccctccgtcctttattcatgatgctagtcaagttaagcctagcttgccagcacctccggtaaggcataatgcattacctgttgctccaacaactcaaagaaaattatcatctgggacatcacgtgttgaaccagctgttccgttaaatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaagtactctcatttaccatctctcctattcttttttattgttttatgctgaaatgctctctaaagttaaggtcaaacatattttccccttgtcctttgcaggaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttgttcctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgatttatataacttgtataaagaggttggtcttcactgctgctattttcatgcattaattatgggcttatcgccttgtggggttaaatatggagagagaaatgctgatttaatcatttatctgatgaaaatgatgattgatcattcaggtggtatccagaggcggattttatgtaggcaatggcataaattggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgacggtatgcatgtagttgatatttgtttcaatcttgttagatttgctgcagtgaattggttattttctgtggtaccatttatcacacttcagttgttatgctacttagatttactctactatatgggtcagcctgtaagagggacatgttttggcacatagtcagctttgaacgttctattcctggaaaatttgctgcacaggtggagccaggaatcctaagatttatttgtcaagcgacgggtcaggagtgctaatttcattttaaaatcacttaagatacagcttttagcattgaaaatctcagaaattatgggtaggccaagctcctgctcgcgcctccccctctctctgccactgggcctgcctgcaataatttgctgacaaaattcactatggaacactaaatgtggtcttggctagaacgcactctaatgggcttcagaccatctaggattggtgatccatcatgtggttattccttaaatttggtggagtgactccattcttcatttctctacctagtgtgtgcttttagagatgagctgatgatggacaaacacattccattcctccaaacaaataacatatttagaaccatgtcatcaattgtccatcttattcctcaaaccacacaacccatgtattcgtggtatttgctagcagacactctgcccactgaaataatatgcccgctgaatgagaaatatttgaaaatgaccttgctatcttcgtttcttctatttaatttaaataattaaaaggtgggcctattaggcagtgatggggcttaggggtgttacgaaaagccttgatcttggagtcctttgtgccgtacacgagcctctgcggttaatgtacagatagttgctatgagcggttaaccacaaatcatagtgtctgtaacacatttattcttttttgtttccttttgttatcttttatttacggtatgttagctgccatttcatttgcctgtttctgatgtgctaaatgtgttgcaatagggtgttggaaacacgttaaagagacattacgagacatacttgttggaatacgaactttcacatgatgatgtcggtggggaatgctgcttactctgccacaggttcgaggacacgattttagtatggtgctgttgcaactgtttcctgtcggtataatctaacatattccttccaactatttccagtagtgctccaggtgattgggttaactgtgggttgtgcggtgaatgggcgcactttgggtgtgatagacggcaagggctaggcacattcaaggtagaaatatttcctgatctgtatctaacgttttatattcctttcaataatttcattatttaggttgtgcattgatctgggctgctgctgtaacaggactatgcgaagacagatgggttggaatatatctgcccccactgcagcctcgcgaactataagaagaagccaccgcctcccgagagtgctaatggcttcagaatagcatctgcacaacggaatatttaatttttgttactcttttttagcctactgtcccacttttgggtaagacagggctggtagatagcatgttttaaacaatgtagtgtttagctgtattatgtcattaacatcatttatttagtgaaaggttttatattgattgtaatcagtgaagtgacaactcagaaaggctctaattaattgctgggttcaatcgtg</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068481.1 RefSeq:Os08g0451400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 13:06, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information