Difference between revisions of "Os09g0123100"

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==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]
GeneName = Os09g0123100|
 
Description = Tetratricopeptide-like helical domain containing protein|
 
Version = NM_001069135.1 GI:115478009 GeneID:4346428|
 
Length = 5998 bp|
 
Definition = Oryza sativa Japonica Group Os09g0123100, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
 
AP = Chromosome 9:1726812..1732809|
 
CDS = 1727021..1727206,1727897..1727983,1729290..1729466,1729639..1729725,1729799..1729870<br>,1730622..1732496|
 
GCID = <gbrowseImage1>
 
name=NC_008402:1726812..1732809
 
source=RiceChromosome09
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008402:1726812..1732809
 
source=RiceChromosome09
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggagcccaaggaggcgcccccgccgccgccgccccagtctccgtcctccaccgaggaggaagggatgctctccgtcacggccgctatggccagagacgccgccgtgctgttccagagccgccgctacgccgactgcgccgaggtgctcgcgcagctcctgctcaagaaggagggcgaccccaaggtccttcacaatatggctattgcagaatctttcttggatggttgtcctgacccaaagaaattgcttgaaattctaggcaatgttaagagaagaagtgaagagcttgcctgtgcatctagacaacaaactgattctgccaatgggacaggaaacagtgtttcttctggatcaagagggagtggcattatacctctgatttctgctgcaaataatgcgacaacctatggggatgagtttgacacaaccataataacattcaacactgctgttatcctttaccatcttcacgattatgaatctgcactatctattttggatccactctaccgaaatattgaaccaattgatgagacaactgctcttcatgtatgctttctgttgttggatattacattagctttgcaagatgcatcgaatgccgcggatataattcagtacttggaaaggtcatttggagtagttagcgcaacaaaccagaatgaaaatgctaatacagctcagcagcagtcagctcaaccaaagccttctgcaaagattagcacacctccagattctgattcaaatacttgtgctggtggatctgaaaacctttcagcaggaaatttttctgatgatacacttgagtttgaatctttttactctaccttggatggtggtaatcagaacttgggcagaccaattttaaatgatttctcaagggcttcagctgatcttgctgccactgctgctgatttgaaagttagactgcaaatatacaaggtccggcttctgcttcttactaggaaccttaaggttgcaaagcgagaactgaaagttctgatgaacatggcacgtggtagggattcatcaacagagcttctcctgaaatctcagttggaatatgccagaggaaactatcgcaaggctgtgaagctgctgagcacacccaataatcggagtgaacaagcaatgctggccatgttctacaataatcttggttgcatactccaccaacagagatctattcaaacctcagtatggtgcttcagcaaagcattgaaatatagcttatcacttcgttcagagaaaccatgcaagctgaccgcaatatcgcaagacaaatcttgtcttatttcatacaactgcggcatccaacatttgatgtgcgggaaacctttgttagcagctcgctgttttcgtgaagccatgccgctcttgtgcaacaggtccctcttttggctccgttttgctgagtgtagcctgctagctctggaaaagggtatcctgacttcaagtggtgctacttcgtgcaatgatgagattgaagttgatgttatggggtcaggaaaatggcggcacttagttataaacccagtgaagccaagtcattcttcagaatctggggaggaggtaagtttggacaaatatggaaatctgatatcccttagatttgctagacagtgtctactcaatgcccaaattttattggatccctctacgaaggaaaatctggtgattgcatcaggcacagaggaatcgaatcaaacatcactgcaaggccagaaaggctcaggtcagaagaacaccactaatacagattccaaaccgcctggtccagcactaactaatgcaaatggagaacagaagggaatttcaaacttgaatgtcaccttgcagagctctcttgctttgtatgatgacatatgtagaaaagagaacctcaaaattaaacaagccatcttgggggaccttgcatttattgagttgtgtcttcagaatcacttgaaagctttgtctattgccaagttgctacagcagctgccagaatgttccaggatgtatgttttcctcagccatgtatacgcagctgaagcactttgtgcactgaatagaccaaaggaggctgctgagcaattaactgtttatttgagagatggcgatgatattgagttgccttacagcattgagaactgcgagaaagcccttgttgagaaagacagcgatggtgaagattcagttgctccggtagtcacaaaattgtcctcaggagaatctcagtattcagaaagcctcaagcctgaggaagctcagggtgttctttatattgacctaggcatgacagctgcagtgcagggagagcttgagcaggctaactatatggtaagccgtggcgttgccttgttgcccaacaaccccagggcagtgctagcatcagtttatgtggaccttcttcaagggaaggcacaagaagcaatcgccaagttgagacgatgtagaactgtgagatttaggaggcatagtgtagcagtcagcagttaa</cdnaseq>|
 
AA = <aaseq>MEPKEAPPPPPPQSPSSTEEEGMLSVTAAMARDAAVLFQSRRYA                    DCAEVLAQLLLKKEGDPKVLHNMAIAESFLDGCPDPKKLLEILGNVKRRSEELACASR                    QQTDSANGTGNSVSSGSRGSGIIPLISAANNATTYGDEFDTTIITFNTAVILYHLHDY                    ESALSILDPLYRNIEPIDETTALHVCFLLLDITLALQDASNAADIIQYLERSFGVVSA                    TNQNENANTAQQQSAQPKPSAKISTPPDSDSNTCAGGSENLSAGNFSDDTLEFESFYS                    TLDGGNQNLGRPILNDFSRASADLAATAADLKVRLQIYKVRLLLLTRNLKVAKRELKV                    LMNMARGRDSSTELLLKSQLEYARGNYRKAVKLLSTPNNRSEQAMLAMFYNNLGCILH                    QQRSIQTSVWCFSKALKYSLSLRSEKPCKLTAISQDKSCLISYNCGIQHLMCGKPLLA                    ARCFREAMPLLCNRSLFWLRFAECSLLALEKGILTSSGATSCNDEIEVDVMGSGKWRH                    LVINPVKPSHSSESGEEVSLDKYGNLISLRFARQCLLNAQILLDPSTKENLVIASGTE                    ESNQTSLQGQKGSGQKNTTNTDSKPPGPALTNANGEQKGISNLNVTLQSSLALYDDIC                    RKENLKIKQAILGDLAFIELCLQNHLKALSIAKLLQQLPECSRMYVFLSHVYAAEALC                    ALNRPKEAAEQLTVYLRDGDDIELPYSIENCEKALVEKDSDGEDSVAPVVTKLSSGES                    QYSESLKPEEAQGVLYIDLGMTAAVQGELEQANYMVSRGVALLPNNPRAVLASVYVDL                    LQGKAQEAIAKLRRCRTVRFRRHSVAVSS</aaseq>|
 
DNA = <dnaseqindica>210..395#1086..1172#2479..2655#2828..2914#2988..3059#3811..5685#atcggccttcctcagttggcaactcgctccacatcccccgtcgagtctcgctctcgccgcgccgtcggttccaaaccctagctctccctcccggccccccaaatcctgccctccggagctccgattcaccgcctcgccgcgcgattccggccctaccctggcgccctgcgcccccgattagcccccatcctgctagatccacccgcacaatggagcccaaggaggcgcccccgccgccgccgccccagtctccgtcctccaccgaggaggaagggatgctctccgtcacggccgctatggccagagacgccgccgtgctgttccagagccgccgctacgccgactgcgccgaggtgctcgcgcagctcctgctcaagaaggagggcgaccccaaggtagccgattcgccatctctgcttcggggtgattagttgggttaggtccttcctcgctaaacgacaaaatcttttaccgaatccatctgcttctctaggttatatcttgcttgctaggtgttcgttagtggagctgcttccgcagcattatgggttgagctcgtggggtgagttgcgagtttgcgtatgttaatctaggcagttgggtgcatcttgcctccgtgtttgcgtagatgtctgcatatttcacctgtatgtgcgttatggtctgtgtgtgatatgcaggtgggtgcatcttgaattattgggtttgtgtttgcatgcttgttaatttgtatttcatcagtttcatgttgtgtttgatgcatgcgtagacatggatgtccacactggtatgtgtcacccagtatgtgcttctcctcgtgcatgattctaattacttatcttgtccatttcatgtatagggcatgatctgtttaataaggttataagtctgaaagaacaatatgcatacaaataggaaaaaaaacaattacccgatatctgtgtatactgcatattatgctcttagatgcttttctacggtggttatcttgaactggtagcttttccactatatcttgataaagagatgatactctgatcatgtattattttggcatctgatattgcatttttataatctttcaggtccttcacaatatggctattgcagaatctttcttggatggttgtcctgacccaaagaaattgcttgaaattctaggcaatgttaaggttagtgaatttgcattagtttgtttgacttttgatgttcatatttccattgaggctatgtactagaaatatccattcttttgtcagtagagaactctacagctaagttactgtttgtacaggagtttctgattttttttgggtgaaatttctgttttccaaatgtacctaaaattttcttggcaacaataattcaaacctaaaactatgtttactttttttttcttatataaattcattccaattgtaaatttggttatacaagaaatgatataattttgatgtttgtcactttagtccaatcatttagttagtgtcaattatatgttactaactatacttagttctcaaaaggacagtcttcttgttctgccctgttttccttcatccattcgccgtgggtcttatcattttgcacaactcatctatgtttcagttccaatttcaaatttgttcttttccttcttctgggttgatgaagatatttgtcacatgctacatgcacgaaaatttattttgttttgtgtatagtaaactttaacatctacattttatttgtgtttgttgtatgtgtatatgttgtatatggtaaaagcatccctcattagtcaggagttatgtgatgcattaatgcacaaaacagaaggcatataacatgctacatgttgagagtagtcataatatcttgacttgcgtgcattttgatcgacatctatcagtgaggggctcaaaacttatatttagtcatgagccatcatttcttcttttttgaatatatctggacctaacggtagtctttgtattccacaatttacgattcttcattgatgggaagtaagaaacaatattacaaatgctggttttgtcaaaggtttctaacttttatgtaaatgctgttaatgctgaccaaagaaaaccatatattcttttttgtagtggatgaacttataactatatttttttcagatgtgatatcatcactatatgtttggaactcacattaggttctcagactccatttttattcgtcattcaagttgcgcatataaatatctaatattatgcagcatgccagttattcagtcatttacacaactgcacacatatcactgtaacgtgttatggtcgtcccctaaccacttacatctacttatagcattggagccatctacttttgtgtggttttaagccttaatttatggtgcctgttttgatttctcattttctcttattatgtcattgttttattctcctgatttaataattatttacgaaaattctaatgttccaccttacatgcatccagagaagaagtgaagagcttgcctgtgcatctagacaacaaactgattctgccaatgggacaggaaacagtgtttcttctggatcaagagggagtggcattatacctctgatttctgctgcaaataatgcgacaacctatggggatgagtttgacacaaccataataacattcaacactgtatgttcttttcttttgcaaaagtaattatttgattgtttgatgtttctggtctatggcttgcattaattgtagtactgctttagccaatcaaccatggtaagcattgtaattggtgtgagctttaactgaagaggtgattgatttgtttatggcatttttgaatttgcaggctgttatcctttaccatcttcacgattatgaatctgcactatctattttggatccactctaccgaaatattgaaccaattgatgaggtattattagttataagatgcttaacttggaaaccaggttgttacattttctaatatttcttcaatactgcagacaactgctcttcatgtatgctttctgttgttggatattacattagctttgcaagatgcatcgaatgccgcggtaagttttaacatctcagtatatcgtgagttgatgctacaaatactacattagctttgtgggcttatgggtattttgtcaatagattctcctgaaaatgcaatacatgctgtgtctcgtctgtttgatgcataaaaattaaaaaaaatgtcttcctccttggcattggtgcatatgccaatatttaccacttatgatgttttacattcattgttatctacattttttcccaaaaatatgctccatggtgtcaaaatacccttccataactagttcccttttttgtcaaattttgactggaatgcatttcgtgcaatttttccctatatttatttaatattacaaaatagaactaccatatattgttttctgttttgtcctaaattgcagtattaacacaacaatccaagatgaccaaattctcatgttttcatatgttaattttagaagtaccatgcgtgaacactcattgtaacaaaaaagaagtgattcaatgcaaaaaattcacatttacctgttctgaacgattttagggcttccattattcacttttatccattccaaatgatgattatgcctttccacgtgagaattactgaactcaagtgcctaagattgtcagatatagttgtgatcttaacttgtatggcgaaccgtaccatttttgtttgtcctttttattcaaagttgcagcattagctcttgtataaagcatcttattcaactgcatgcatcacatatgtttgtacaggatataattcagtacttggaaaggtcatttggagtagttagcgcaacaaaccagaatgaaaatgctaatacagctcagcagcagtcagctcaaccaaagccttctgcaaagattagcacacctccagattctgattcaaatacttgtgctggtggatctgaaaacctttcagcaggaaatttttctgatgatacacttgagtttgaatctttttactctaccttggatggtggtaatcagaacttgggcagaccaattttaaatgatttctcaagggcttcagctgatcttgctgccactgctgctgatttgaaagttagactgcaaatatacaaggtccggcttctgcttcttactaggaaccttaaggttgcaaagcgagaactgaaagttctgatgaacatggcacgtggtagggattcatcaacagagcttctcctgaaatctcagttggaatatgccagaggaaactatcgcaaggctgtgaagctgctgagcacacccaataatcggagtgaacaagcaatgctggccatgttctacaataatcttggttgcatactccaccaacagagatctattcaaacctcagtatggtgcttcagcaaagcattgaaatatagcttatcacttcgttcagagaaaccatgcaagctgaccgcaatatcgcaagacaaatcttgtcttatttcatacaactgcggcatccaacatttgatgtgcgggaaacctttgttagcagctcgctgttttcgtgaagccatgccgctcttgtgcaacaggtccctcttttggctccgttttgctgagtgtagcctgctagctctggaaaagggtatcctgacttcaagtggtgctacttcgtgcaatgatgagattgaagttgatgttatggggtcaggaaaatggcggcacttagttataaacccagtgaagccaagtcattcttcagaatctggggaggaggtaagtttggacaaatatggaaatctgatatcccttagatttgctagacagtgtctactcaatgcccaaattttattggatccctctacgaaggaaaatctggtgattgcatcaggcacagaggaatcgaatcaaacatcactgcaaggccagaaaggctcaggtcagaagaacaccactaatacagattccaaaccgcctggtccagcactaactaatgcaaatggagaacagaagggaatttcaaacttgaatgtcaccttgcagagctctcttgctttgtatgatgacatatgtagaaaagagaacctcaaaattaaacaagccatcttgggggaccttgcatttattgagttgtgtcttcagaatcacttgaaagctttgtctattgccaagttgctacagcagctgccagaatgttccaggatgtatgttttcctcagccatgtatacgcagctgaagcactttgtgcactgaatagaccaaaggaggctgctgagcaattaactgtttatttgagagatggcgatgatattgagttgccttacagcattgagaactgcgagaaagcccttgttgagaaagacagcgatggtgaagattcagttgctccggtagtcacaaaattgtcctcaggagaatctcagtattcagaaagcctcaagcctgaggaagctcagggtgttctttatattgacctaggcatgacagctgcagtgcagggagagcttgagcaggctaactatatggtaagccgtggcgttgccttgttgcccaacaaccccagggcagtgctagcatcagtttatgtggaccttcttcaagggaaggcacaagaagcaatcgccaagttgagacgatgtagaactgtgagatttaggaggcatagtgtagcagtcagcagttaagataggaccggtcgcccttttgatgatttctgtagttgataattgccatttcatcttttggaccctgacccccaggtggatgatcgaagatcgtaatgttcttgtgtgtaccatacataagaagaagaaaaactgtagatctccccccctttccccactttaaaagctttccctgattcaggggtgtaatgtgtcggagttaatatcgttttagttttgccgctctttggacagaagagggatgaaatagtttacgatatatgtgcttattgttcgggaaagcaacgtgcaaaatcttttgaacccgatgacc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069135.1 RefSeq:Os09g0123100]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 9]]
 
[[Category:Chromosome 9]]
 

Latest revision as of 13:15, 14 May 2015

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Structured Information