Difference between revisions of "Os09g0248900"

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(Created page with "{{JaponicaGene| GeneName = Os09g0248900| Description = Isopenicillin N synthase family protein| Version = NM_001069204.1 GI:115478147 GeneID:4346502| Length = 11868 bp| D...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
GeneName = Os09g0248900|
 
Description = Isopenicillin N synthase family protein|
 
Version = NM_001069204.1 GI:115478147 GeneID:4346502|
 
Length = 11868 bp|
 
Definition = Oryza sativa Japonica Group Os09g0248900, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
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Please input expression information here.
AP = Chromosome 9:4284780..4296647|
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CDS = 4288635..4288763,4288863..4288952,4289042..4289122,4292076..4292122,4292291..4292310<br>,4292426..4292585,4292671..4292729,4293734..4293801,4293883..4293946<br>,4294060..4294178,4294348..4294463,4296575..4296608|
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===Evolution===
GCID = <gbrowseImage1>
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Please input evolution information here.
name=NC_008402:4284780..4296647
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source=RiceChromosome09
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You can also add sub-section(s) at will.
preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
GSID = <gbrowseImage2>
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Please input related labs here.
name=NC_008402:4284780..4296647
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source=RiceChromosome09
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==References==
preset=GeneLocation
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Please input cited references here.
</gbrowseImage2>|
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CDNA = <cdnaseq>atggcttctgacttcaaggcaatccccttgatcgacattagcccacttgttgaaaagatcgatgatccaaatatggccaatgacaaggatttgctgcaagttgtccgattgttggacgatgcatgtagggaggctggattcttttatgtgaaaggccatgggattgctgagtcgctaatgaaggaagttagggacgtcacacacaagttcttccaacttccttatgaagaaaaactaaagattaaaatgacacctcagaatggatatagaggataccaaagactgggcgaaaatattaccaacggtaaacctgacatgcaggaagcaattgattattatgcgcctattgaacctggtaaatatggagatcttgccaaaccaatggaaggaactaatttgtggccaaaatatccatcaaattttgatgcactactaaaaaactatatcagccttctaagagatctttccagaaagatcatgcaaggtatagccttggcattgggtgggccagttgatgcttttgaaggtagaaccgcaggagatcctttttgggtttgcaggttgattggttatcctgtatcaaccgatattctagaagagcatcgcactgacactggctgtggagctcacacagactatggccttctgacattggttaaccaagatgatgacatatgtgcccttgaggtcaaaaaccaatcaggtgagtggatttatgccaaaccaatcccgggaaccttcgtctgcaacattggtgacatgctgaaggtttggtcaaatggaatatatcaaccaacacttcatcgagttgttaacaattcccctcgttaccgtgtatctgttgcctttttctatgagtcaaacttcgatgctgccatagagcctgttgagttctgccgggagagaacaggtggtgtcgccaagtatgaaaaggttgtatacggggagcatttaattaaaaaagtcttgaataatttcatcaaataa</cdnaseq>|
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==Structured Information==
AA = <aaseq>MASDFKAIPLIDISPLVEKIDDPNMANDKDLLQVVRLLDDACRE                    AGFFYVKGHGIAESLMKEVRDVTHKFFQLPYEEKLKIKMTPQNGYRGYQRLGENITNG                    KPDMQEAIDYYAPIEPGKYGDLAKPMEGTNLWPKYPSNFDALLKNYISLLRDLSRKIM                    QGIALALGGPVDAFEGRTAGDPFWVCRLIGYPVSTDILEEHRTDTGCGAHTDYGLLTL                    VNQDDDICALEVKNQSGEWIYAKPIPGTFVCNIGDMLKVWSNGIYQPTLHRVVNNSPR                    YRVSVAFFYESNFDAAIEPVEFCRERTGGVAKYEKVVYGEHLIKKVLNNFIK</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]
DNA = <dnaseqindica>7885..8013#7696..7785#7526..7606#4526..4572#4338..4357#4063..4222#3919..3977#2847..2914#2702..2765#2470..2588#2185..2300#40..73#agagccttccgtcgtgtcagtgtgccacccaaactcaccatggcttctgacttcaaggcaatccccttgatcggtaagctatgtctgtcttttccaggttttttttttcttttgagctaaagagagaatttatattaatgactgatgactgactagggggttacactcctgacttgacaagtcaacgatccttattgccagttaagcaagcctattttttactatggccatgtttagttccaaagtttttcttcaaacttccaacttttccatcatatcaaaactttcctatacacgtaaacttccaacttttccatcacatcgtccaatttcaactaaacttttaattttagtgtgtactaaatacagcctatgtctttttcttgtgcacctgcacactctgcaagcactacactctgcaagtactttagaaatcagcattatccatgaggatccttatggactccttatcaagttaaaacaaccactaaaactagcacagtttttatggcacttttaacgttgcctataatactttgctatatagacatttttaggcatattttgttaaatctatcttgtagaggtatatttttggtacttcaaaatttttctcatatgtaaagtcattttctcaagacatctaaacctcggttgagtcactttctaaatattaatatgtgcatatatagaattaacacaacacatacatttacaagtaatgatataaggttcagataattagtgcattgaagataaaaataatatactcacgagtttaaggattggtaatacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgttgttaatgaatctagatagatatatatatttagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattgtgaaacggagggagtagcaaggaaatatatttttttctattttcacattgctttgctataggtatggcaaaatttaatgcctgtacagacattaaaaaaatacatattcttttctaaagataatttatcaaaatacatttattagacatatttttaaaaggtctctgctgcattgtaaaggcatgtttgcctctatatagtactagaaaaatatctccacaaacgcaggctgtgtttctaaaaaaaaactccacaaaatattttttttgtagtggttgtttctaagataatcagcatgcgcaccaatttaatcgtcactggcgtatatctaaacaacttgcttcaacctaccctgcataactgcactgataccgttttgtatgcactgataattctttgattatcattcctgtacttgcttcacatgtttcttttctgaatccaatatcaacattaacctttgcgtagccttctgtcgggtcttgccatttattatttgcatagcaacattatattcttcaaatttcactatttttgtccacatacagaggccccatactgttaacatcatcagtccattgtcggacaggcaatatgttaccttcaaattgactgaatctgaaattgtggcccttccatactatagtagaattcttgcttcactgcaagattcagattatgaaatcctggtctggttatgcttcaccgcaataattcttttgcctactttgggaccaccattttcagttacttcaattaaggcgtgttcggttagttcctccacaagaggattgaagaggaatcggagacgatttatttcacaccttttgaggggatttatttctcgatggggaattgcatgttgtcatctctaattaagctcacagtagcagtggcacaatgcaaaagattagtaccaccatcgccagcttgtttgcggtttaaaaggatgaaaagcccaattacagtacaaagtattgcagtcttaacaacttgatttgtatctgaaccctttttaaaccttgaacattacaattaaggctgaaaaagaactcgagtctcacatgctactcgtgctccagacgatcaagccgagctcgggctgcctatgccaaagctcgtgagctttgtcaagcctcctaatcgttacatgttacagctctcagtaactaaaacatgctggagctgatatatcttatatattgatacattgaaatcttcatctgaaaatttcaccctttttttcattctcagacattagcccacttgttgaaaagatcgatgatccaaatatggccaatgacaaggatttgctgcaagttgtccgattgttggacgatgcatgtagggaggctggattcttttatgtggtaattacacgtttacttacctttttagcatcactttatagtacaatgggtacagatcaacaagaatattttgatgtagctgtgtccttgcgttgcaagctatgatttttatattactaccgaagctaagtaatgcaaatgttcatctgtatgttattattattaacagaaaggccatgggattgctgagtcgctaatgaaggaagttagggacgtcacacacaagttcttccaacttccttatgaagaaaaactaaagattaaaatgacacctcagaatggatataggtgtgatttcttatagtaccattttaagttccaacattgatttttccgtgctccgttttgggtcgttcaaagcgtcctttctctatgagtaactttgttctcttgatcatcagaggataccaaagactgggcgaaaatattaccaacggtaaacctgacatgcaggaagcaattgatgtaagtttatttttctttctttatttttagtgacccattaacttgttactagttaatcgctgagaagaaaaaacgtcacagtattatgcgcctattgaacctggtaaatatggagatcttgccaaaccaatggaaggaactaatttgtggtatgtttccaacctttcatctttgtttgttttcattttataccttggcgctatattatttggagccctttatggaggtaagaggtactgttatttaggttatgttttgtgttataaaatatatatttgcttatctttagtaataaaatgacagtaaagaggaaaacattaatgacaatatatagaaattattattgccatacatccactagaagaaacaaaattaattcaggcaaccatgaaaagtgtctataatagaaattttacttgaaatatactagcaccattgttttcaaaactcaaaagaaaatcttaaaatttgaagtggttcatatgtttaaagaattacttaaaattacataacaaatgattgaaagtttgaaagtgaatagtgtctagtgacgattattatcaaaacgggtggagtagcaagtgaaaaatacttttttcttcatacttcaagatctattacctctaaatgaggaaagagaaatatcaatatgaaatgaatggcctaaaataatccgggagtactataacaaaagctcatgttatttaacatatgtgagagatattgcttgcttgactttcatataaaatggtaccacaattctacttattgatcacttactatgcattgataataattatgataatataattaatttagcttatagcacacctctatttggaagaatgaaggaaatgaatttctaatttacaatatattaataataacaatatgtatcatgttatgcaatatggctacaattgtgaattatttgttgttgcatatgttgcttcaatataatgtattgttgttactagaagcattttgaatagttgaattatagcattccatgttatatattttgatactactagttgaattactttgctattactgaagagctgttctgaacttaatttggtacccttcccttgagtacttttggttagaaatatttcaaattcaattaaccatatcatttactttgatgcaggccaaaatatccatcaaattttgatgcactactaaaaaactatatcagccttctaagaggttcacttttgaacttagtttagatcttagctatgcatctatgttatttatccttttttttttctgatggaaattttacttatagatctttccagaaagatcatgcaaggtatagccttggcattgggtgggccagttgatgcttttgaaggtagaaccgcaggagatcctttttgggtttgcaggttgattggttatcctgtatcaaccgatattctagaagagcatcgcactgacactggctggtaagcaaaatgtatctatgtatttatttggtagtatattgtgctagaatgtacttactagattcatctgacaccgtttttctcttatgtcacatccgttctgcgatcaattcagtggagctcacacagactatggttagtacttagtacatatctttcagaagttcctttcgaaatagacttttatatatggacaacacatacataaggtgctttgatgcattgtaaaaagtttcacgtgttttctgtatttctgtttatcaaactcatgaagatcatttttgtcatttgattatattacaggccttctgacattggttaaccaagatgatgacatatgtgcccttgaggtacttgtttcttcaccatccatatatcttataggaatacatgctttctttgtgtttgaatattactcaagttccactttttaccctggacttaaaactaatcgtttttactagaaacctagactaatatcatccttgaccctgtttagatattgtttctatcgaaaaattggtggttttactttatgtagactcttatttcgcacattatgtctaatactatataactatatagttgatcctcactaagtgtagttaatgctatatattttctatcatgtagttaatgctatatatcttctctctcattaaaccacattacctcaattgtttttaaccacttgaccattaacctatggtactatgactatatagtttatccccactaaatctagttaatgatgtttctcttctctctcattaagtcacattaccttaattgtttttagccattggattaatctatggtccaaattgtctcctttctttttcttcactcatgatgcttcaccttaggttttgccttaactcattgaatgatcagtatatattcaatctaaattatcataacgcacatcatctcaattgtttatagctcttttcagagattgattagagatgaagttatacaaagtatataaacttatacattttgctacaaaataaattaaacctatactttatttctatcattatagcataatatttccatagcaaagcacgggatttcatctagttggcataatggttgtgtacatcgatgtggattttagggactggattgttatcctttatcttaaaaatgttggggaaagtcatcttataggggaccaggcattgataggatcagaaatagtatttgtgtggatctggaaaatgtgtagtaaaaaacaattattttacggagcaaggagaaaatgggactacaagaaaattaatgggccacccaaaatggactttatcctatcttatacttactcatccatgtcgtgctctctgttttatgtgtccctcaaatttgttgaactaatctttttagtctccctattccttgtgatatttgttgtacacaattaacatttcaactaaacatgttcttctatcccattgtgcaattcacgaatgagatcttggaagccacttaatcttgcaccggaatttgatctcatagtagtaaccaaggtctagtttcatggccgcaaaccagaaaccataaattcggatccatgccatactttatataccgatcttcactaggagtttgtttactcgatgattctcatctttgaaccattgtgtttttctctattctaataaggaaaaagtatgaattacctcccctcaactattgcggtcggccgaattatacccccaaattgaaataccagacattataaaccctcaactattcatacaggacaaataaccctcctcaacactgttttgagcggttttgacttaagcttgcacatgtggtgccaacgtttcaatctagtcagcaaaaaaataaaaaaaaactccatggggcccacctgtcatacccctccctcaatccaatccttccctagtggttctctctctcgcacacgcgctcgagcagccagctacagagcccatgaaggaggaggcggaccggatggctggtgacggaggcggagcatgcccgggcggcgggcaactgaggcggagctctttcaggtgactagccacagagacggagattgcccacacggcgggggcttgaggcggaggtcactcgtgcagccggccggaggcggtgattgcccgcacggaagaggagacggaacaggtgaccggcggcagaggcggagcatgcccgggtagcgagcggctgaggcggagctcgcctgtccggcagaggaggcggaccgggtggccggcggtggaggcggagcacgcccggtcaacgagcgattgaggcagagctcgttctggaggttggcggcggaggcacagatcgcccgggtggcgagcggctgaggcttagctcgcctgggcggccggtgccggatcgggtggccggtagtgaaagcggagctggtgccacgcgtgatagagaacttacgctccagcgaggatgccctccccggggcccgccgctcgcccaacccctccgcgaccttctttcttcatccagatcaccgccttctccgcccggaccaccaccgccaccgcactggggagtgagtcggaagagaaggagaggggaaagggaggagcggcggtgccggccctcctcgctgctattcgcctcctgcacagctccatctcgtgcatcgccgccgtggacgcggccaccgacacccgtcactcgtacgtcacgtccgcagtcgcctcctgtcctccgatccccgccccgcccaccaacagcaaagagagagggatgaggtaggagtaattgacaagtgggcccatagttttttattactttttttatgattggattgccaaattggcgccacataggatcaaaatcgctccagattgagccaaggggggtaatttatccggtttcaatactttaggggtatcaaatgtccggttttgtgggtttgggggggtggtaattcggtcaaccacgatagttgaggggagtaattcatagtttttccttctaataataaagaagaggggaactaaaacagatcaaagatgagaacttgattttagtttctttttaattattttaaagatcagtattttttttcatggcagagcacatctgagctgtgcatggttatatagaatttctcactggatgatctagcatgagatgcttctacacttctgtaacattctaagcatgttctaagatgcataagtaattatgtaattaccatattacagttgctgcccactgttcatatttagccttaactgggtgaagcaaacaattttgatttgagtgaaatatctggtgaatatatttcaggtcaaaaaccaatcaggtgagtggatttatgccaaaccaatcccgggaaccttcgtctgcaacattggtgacatgctgaaggtctttttttttcttcgtttgcaccttcattgtcatctttttattgtcatcaaacttgtgacacttatcacatgtcatatttgggttaggtttggtcaaatggaatatatcaaccaacacttcatcgagttgttaacaattcccctcgttaccgtgtatctgttgcctttttctatgaggtatattacttgcttaatcccctagctcatcttaatactacacatcatttatgtgaagttgctctctcattgttctttctttctgaattcatgccacagtcaaacttcgatgctgccatagagcctgttgagttctgccgggagagaacaggtggtgtcgccaagtatgaaaaggttgtatacggggagcatttaattaaaaaagtcttgaataatttcatcaaataaatttgcggaacagaaaaaacaaacgtgtatgcactccaagatcatatcacatcatttatcaataatactgtttgtgaaattttattgtagcacttgttgcatttctataatttgctacattttaggggctatcttaacactaaagatagagttcctttatggttcaccgtactatgctatagtagtgggttgtactagtgatccaacgattcgttggcataataagcctggcctaaggtcatgcctgtaactcgcctggcatctgtttggttgctaccctgaggattctagcctgataaatcttgcctgagtgtactcgcctgagtcaggcgtacaaaatgggtggcctgagcatttcgctccacctgcctgagtaaaatcaccgctcttctatacagtagtgaaaacgagaccacttcttcctcctcctcactgctagcctagggttcttgcggagaccagttcccatcgattcttccatggctccagcagcggtgaccaaggaacttgcagatctggtggccagttgtttctttttccagtaaaagtcctgcatttggtgatctgttagagcgtagctctgaccgtgagagctagcaggtaagtagaaaaagaagagtactttgtccagatctgaagggaatcaaaatttctaactctctcctttcctctgtgcgcgtcagattgccaagcccccacaatctttgccacgattttctgcagcaaggtgagaacacaatcgcagtttttttttttacttttcccctctcttgctgctttgttattcaaggatccatagagagtatgcctattagaagtaaaactatgtcaaaatgtgtgctttttttcactagtttctttttttttcctttgtcgtgtgatgctcagatggatctagattctactcatcagtatattgtccatcaacgaactagaactttgggtgttttagctgttgtgttggcaattattcgctggcgacgtcgtataagaaatagacgacatccaaggaagtatggtccattggtggatagagatttggtcaggaaaacaagattagatgatttgtacaatgggagtgatacaacttgcatcagtcagcttcggatgaggaaagaagtgttctggaaacttgcctccaaattacgtgataatggcctactatgtgacacaatccatgtctcagtggaagaacaattagctatgttcctgcacacagttggccacaatttaagaaatcgtgtgattggattctatgtcataagatccagtgagacagtgagccggtacttcaatgaggtgttgaaagctttatgttgtcttgctaaagatatgatacaaattaggtcaatagagacccattcaaagatagttagtaatcctggcagattctacccatattttgaggtatctcacgtgaaatatacttattcaacattctaattaatgtaaccactttatgtttgtatagtaataatttcttctaacttaggattgcatcggggcattggatggcacacacatccctgcatttgtcccagagaatatagttaacaggtttagaggtcgcaagtcctatccaactcagaatgttcttgctgcggttgactttgatttgaggtttacctatgttcttgctggatgggagggttccgcacatgacttagtggttctcaaggctgctcttagaagatcaagtggaattcaaatacctgaaggtgtgcatgaagctttagtattttcaggtgcacaatattttgtgacaaggcaataaaaccattcatcttctgttgtaggcaaatactatttagccgatgcagggtatgcagcaagacctggtatactaccaccatttaggggtgttcgataccacctgaaagagtacgaaggcgggaaatcaccagaaacacctcaagaattattcaatcttcgacattcctcccttcgcacatctgttgagagagcatttggaaccttaaaaaaccgtttcaaagttcttgctagcaagcctttctttccatataaagtccaagtgaagatagtaatagcgtgttgtgtactgcataattggatccttgataatggtcctgataacatcatatatgatgaagctcgttggtatagtaagctacctagatcagctagagtagcgacagattatggcgaggagcaccaacagtgggtagaatttcgagaaaatctagctaatattatgtgggaggaacattaacagtggtgttgtatggcatggatattgttctatgactgttagctatttctaatgaattcttctttcagctcttcatattatagcattttctactttatgtttttttgttggatgccattattacctactgtgcattgctttgtagttcataacatggatataggaggaagcaacaaacatggcaagggaaaaagtaaggcacgcaaaggagttgggggatcaggtgtgaggtcaaaacccataaattggccaccagcattctctgaatttcttcttgactggtacattgaaaagaagttagagctgccaccaaagggagtgatcaagaagatgcatcacactgcttgcacatcagctattaatgcaaagtatggcagtacttacaatgttgatcaggttcaacgacactataggtgccataaagagacttgggcacttgtagctcgccatctaaatgagagtggtggtggctgggatgagacaaacaaaatgttgtctctctcccaatctaccttggatagcctatcggtaatctcttgttgttttgaatacatgatatatttgttaaatagattttctattattgatgactttttcttggcagattaatgaccgtggaattctttcaaagcctattcagttcttcgataagctgcaagagttgtttagtggttcctcggctgatggagcgtttatggaagatccttcaagtgttgctgattttgatgatgaagctgatgaacttgataatttcaatgatatgtcaacctatgctgaaacaaaatatccacaaggggaagactcggacaaattagaggcagacagtgatgattgcaaggaggtggcagcccttaatgcagcaactgcagcccttaatgcagcaactagtcaagtttcatcttctcataccagtggtctgaagccaaacaagaagagtttcaaaaagtgtgggaagccaaagaccttgcctcaatcacataatgataagggtaagcttaaggcaaagtcatcatctggattgcatgatgatgatgatattgatgtgctgatcactagtaccttggttggaatcaaagataaccttgccaaaccaatacagactgcagcccctcaagatccaaatgcccctctatgggacatgctcaagaagattgccttagaacctgaagataaaatgagagttggactacacctttgcaagccagaatttcaagctcatcgcagttttcttattagcatgggtcaagaatatcttgaacgttgggtttacaagttcttatctggtgatgatacaggcctctagtgagctataggtgcatattggttgcaaaagctaatcgtggttgatgagggtctatattttgctgcacccttttggtcatgcaattgccgcactatatatgtgtttagacaattgctaaatattaacatagatactatgatgatgcatgctgtgacatgctaatctgctagtagtgttgctttctaacttttggacaagttgataaccctagctttgtggcccttttcttttgtcttgtttaactcgtggcattactggctagaactgatctgtatgatggctgaaacttgatgttaaatatattcactatttccctgttgcc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069204.1 RefSeq:Os09g0248900]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 9]]
 
[[Category:Chromosome 9]]
 

Latest revision as of 13:17, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

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Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information