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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]] |
| − | GeneName = Os09g0326800|
| |
| − | Description = Similar to PSMD2 subunit (Fragment)|
| |
| − | Version = NM_001069419.1 GI:115478580 GeneID:4346741|
| |
| − | Length = 8188 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os09g0326800, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
| |
| − | AP = Chromosome 9:10186087..10194274|
| |
| − | CDS = 10186218..10186328,10186411..10186511,10187089..10187209,10187295..10187354,10187584..10187651<br>,10188186..10188228,10188714..10188779,10188934..10188972,10189089..10189171<br>,10189274..10189385,10189464..10189544,10189694..10189852,10189959..10190066<br>,10190132..10190236,10190327..10190467,10190569..10190673,10190767..10190988<br>,10192179..10192292,10192392..10192607,10192935..10192994,10193075..10193188<br>,10193297..10193382,10193466..10193574,10193661..10193839,10193919..10193991<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008402:10186087..10194274
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008402:10186087..10194274
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgccgccgcgcaaggaccccaacgggggcgccttcccctcggagcccgccccgccgcagccggccaaggccaaggggaagaagaaggatgagaacaaggacgacgacctgtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcaggaccccgatcccggcgtccagaagctcgccctcgagagcatgaggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattccttcgcccgcactatggaattctcaaggcttactttgagacaatgccagaatctgagctgaagaagtatatggctgatatcttgtcagtattggccctgacaatgtccgctgaaggagaaagagagagcctcaagtaccgaatgataggctctgaaggtgacattggttcatggggtcatgaatatgtgagaaacttggctggtgaaattgcacaggaattccagaagcgccaggatgatggcatgacaactgattccctgaaggaactggtggagcaaattgtttcattccacatgaagcataatgctgaacctgaagctgtggatctcctaatggaggtcgaaaagcttgatttgctagttaagcacgttgactccacaaactacaaaaggacctgcttgtacctcactagttcttctaaatatcttcctgctcctgatgacatgtcggcacttaaaatagcttttgagatttacatgaaatttggagattttgcaaatgctttgcgtattgcacttctgcttgatgacaagtctctggagttgaagcagatttttacagcaactgatgattttcacctgaagaagcaattcgcgtttatcatagcacgccatggtttaagcaccgacattgatgatgacatagctgcagatgaaaatgagaaggaggctttgcaggacataatttctaatattaaattgagtgaggggtaccttacacttgcacgagatattgaggtcatggagccaaaatctccagaagacatatataaggttcatttgattgatggccgaggggctacaagctccagtcttgattctgcaagacagaatctggcggcaacatttgtcaatgcattcgtgaatgctggatttggccaggataaactcatgaccgcaccatcagattcttcgggcagtggttcttctggaaactggttattcaagaacaaggaacatgggaaagctagtgcagccgctagtctgggaatgattcttctgtgggattctgattcaggacttgcccaacttgataagtacctgcacagtaatgatattcatgttgttgctggggctttgctaggtattggaattgtttcttgtggtgtgaagagtgactgcgatccggcatttgctcttatttctgagtatttcagcagggatgagtcaattatacgaattggagcaatccttggtcttggtattgcttatgctggctcccagaaagaggaggttagagagaatcttacagcttttctgagtgactcccaagtacctctggaggtcttagtcttcgctgccatctccttaggtttggtgttcgttggttcttgtaatgaagagattgcacagacaatcatatgtgtcttaatggagcatagtgagccagagcttgcagagccaattatacgcttgcttcctgttgcccttggccttctatatcttggaaagcaggaaagtgtggaggcgaccgctgaggtttctaaaacctttgatgagaagataaggaattattgtgacgtgacactgatgtcgctggcatatgctgggacagggaacgtgcttaaggttcaaaaactccttggaatctgttccgagcatcttgagaaaggtgaaacccaccaaggaccagcagttcttggaatctccctaatttccatggctgaagaattaggggcggaaatggctgtacgttcccttgaacgtcttttacagtatggcgagcagaatattagaagggcggttcctctagctctgggcttgctttgcatatccaatccaaaggtaaatgttatggacacaatgagcagactgagccatgatgcagatgcggaagtttctatggctgcaataatctccctgggcttgataggggctggtacaaacaatgcccgaatagctgggatgcttcggaacctctcaagttattattacaaagaagcaggacatctgttttgtgtgaggattgctcaaggtcttgttcaccttgggaagggtttgctgaccctttcgccatatcactctgaccggttccttctgtcccccatagcacttgctggtcttgtgacggttctgcatgcctgccttgacatgaaatccatcattctggggaagtaccattacatgctttatatccttgccctagctatgcagcctcggatgctattgactgtggatgaggatctcaagcccctctctgttccggtttgtgttggtcaagcagttgacgtcgtcggtcaggcgggtcgacccaagacaattactggattccagacgcattcaacgcctgtattacttgccgcaggggaacgagcagagctggcaactgaaaaatatcttccactgacaccagttcttgagggttttgtgatcctaagaaataacccagagtatcatgaagattaa</cdnaseq>|
| |
| − | AA = <aaseq>MPPRKDPNGGAFPSEPAPPQPAKAKGKKKDENKDDDLSEEDQAL KEQLELYVVRAQDPDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGILKAYF ETMPESELKKYMADILSVLALTMSAEGERESLKYRMIGSEGDIGSWGHEYVRNLAGEI AQEFQKRQDDGMTTDSLKELVEQIVSFHMKHNAEPEAVDLLMEVEKLDLLVKHVDSTN YKRTCLYLTSSSKYLPAPDDMSALKIAFEIYMKFGDFANALRIALLLDDKSLELKQIF TATDDFHLKKQFAFIIARHGLSTDIDDDIAADENEKEALQDIISNIKLSEGYLTLARD IEVMEPKSPEDIYKVHLIDGRGATSSSLDSARQNLAATFVNAFVNAGFGQDKLMTAPS DSSGSGSSGNWLFKNKEHGKASAAASLGMILLWDSDSGLAQLDKYLHSNDIHVVAGAL LGIGIVSCGVKSDCDPAFALISEYFSRDESIIRIGAILGLGIAYAGSQKEEVRENLTA FLSDSQVPLEVLVFAAISLGLVFVGSCNEEIAQTIICVLMEHSEPELAEPIIRLLPVA LGLLYLGKQESVEATAEVSKTFDEKIRNYCDVTLMSLAYAGTGNVLKVQKLLGICSEH LEKGETHQGPAVLGISLISMAEELGAEMAVRSLERLLQYGEQNIRRAVPLALGLLCIS NPKVNVMDTMSRLSHDADAEVSMAAIISLGLIGAGTNNARIAGMLRNLSSYYYKEAGH LFCVRIAQGLVHLGKGLLTLSPYHSDRFLLSPIALAGLVTVLHACLDMKSIILGKYHY MLYILALAMQPRMLLTVDEDLKPLSVPVCVGQAVDVVGQAGRPKTITGFQTHSTPVLL AAGERAELATEKYLPLTPVLEGFVILRNNPEYHED</aaseq>|
| |
| − | DNA = <dnaseqindica>132..242#325..425#1003..1123#1209..1268#1498..1565#2100..2142#2628..2693#2848..2886#3003..3085#3188..3299#3378..3458#3608..3766#3873..3980#4046..4150#4241..4381#4483..4587#4681..4902#6093..6206#6306..6521#6849..6908#6989..7102#7211..7296#7380..7488#7575..7753#7833..7905#aagcacacaagaaaggatcccaacgggccgcgccgcgctcctctcgctccctcgcctccgcggagctcgattcctaaaccctacctcgccgcgccccgccgccgccgcgggccggggagatcgccctcgccatgccgccgcgcaaggaccccaacgggggcgccttcccctcggagcccgccccgccgcagccggccaaggccaaggggaagaagaaggatgagaacaaggacgacgacctggtgagctagccaccccccgattcgccgtctccttcccccccaactctctctctctctcacggatttctttgcgtggttgcagtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcaggaccccgatcccggcgtccagaagctcgccctcgagagcatgaggtaacgaggaggattttctgatggtgtgtaactgtataattctgatagttcgtgatgacttatgttttagtgtgatctggtttgggtggatgcatttatcacactacttatggtttggatgagagaggagctagccaattgaggatgatcatgtcatctagtagactataagactaattaactcataggtattttggttgcactgcttacttgtcctgtgcaagagttcgttgttctgcaaacttactgtcgtgagaatttaaaatgcgcataaattcggcccaagctattggtttggcggcacattgttggaggcttgtttatccttttgcccttaaatcttgggtacaatactacgtaatcacaattaccatgaggtcatgctttaactgttcaatttctccaatctctactgcatcatggtgagattgttttatctgctcagctggaatctcgcatcctagtggctactgctgctattggtggcatcactttgcattattcaaccagttagtgcatacacagttttcacatttgtcttattgatctcttgttaatggtgatttatgcttaacaggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattccttcgcccgcactatggaattctcaaggcttactttgagacaatgccagaatctgagctgaaggtatcaaccaatcttcgatctctaggttgagtcatggttcaaatactacttgatgcttatatggtattcttcaattattttgcagaagtatatggctgatatcttgtcagtattggccctgacaatgtccgctgaaggagaaagagtatgtgaaaatgccattctgatgtcttttccttgtgtcaatttcctagtgtttttttttaatttgcttgtatgctaacttctgagaatgatttacttctgtaaatagtcatacattttttgtgtgtgttttaaatgatagacatatagagtttaactttttctcactgttaactgtacaatatcaatccttcaagaattggctaatatgctttctttttttgtttcaggagagcctcaagtaccgaatgataggctctgaaggtgacattggttcatggggtcatgaatatgtgaggtaacatcaattgccaggcctcctaaattttttagcactcacttttattcacgagacagttacttcttgtgaatcttaatggtaaacatttattcctgagatagtttatgatgaactaccaaacagtaccttcatatcctgtttgacaacttgatgtttttccctgttatgtttgaagttgaatccttaggcttatttagaatttatggtacggtcaaatatttaactgttatcagtgtattaaataatattgaatcgtaactcaggaaattatagataagaagttattcttttcaggttttcaagtgcatgcttatttgattagttgatttaatcattaatcaaaagaaatgattggttagtaatgctgcggatttaggttgtatctggaaataactttggagttttcagtttttctgtttcctttgtttgttattgagaataaggttgttgctgttggaaacttggaatacatatgtttgtctttcgaatctagattggattttctaacaatgtcaatgtctcacttgctagaaacttggctggtgaaattgcacaggaattccagaagcgccaggttggacccttatccatatcatcatatgaattgcataatatttcttcaccccaaagaaagaaatattttaacttttgttttaatccctaacaaaactttaattccattagcaataggtcttaaagccacaagataagatcacccttgtttatattatctaaatgactatattctttagtttaacatccattgtctagtctagctgctgttgattttaataacaagtgtttttaagtgatcttccctcagacctttttgatttttgtaccccacatctatattgtactgattgatgtatacaccattgttatttggcaagaattgagatagcttgattgctttctttttttttggttcagttagaagccccacacatgttttcttctgtcaattatgttatcacatgtgtatggactaagacagtgaaaagtttaggtgtgtggacctcatttttatcatcctaactttgtttttgcactttgcaggatgatggcatgacaactgattccctgaaggaactggtggagcaaattgtttcattccacatgaaggtcaattttgagtagagtccatgggtgtcattttttaaaaaaatttcattgcaaatgtcttgttacacttggtgtaatgcattaaatattagcaaataaactactagtgctcgatcaatggatggactgatactgattatcatttatattgcagcataatgctgaacctgaagctgtggatctcctaatggaggtatgtgaaacttctatttttaaacgtataaaaaaatgttcctttgtttgcattaagagttctcattatttgttcattggttcacaactgatgtgtgatatcaaattacttcataggtcgaaaagcttgatttgctagttaagcacgttgactccacaaactacaaaaggacctgcttgtacctcactagttcttctaagtatgccactgaaattgatctcacttgattaaagcttagtattctctagttttactgaattgaactttcttcactcttttgtgttgggatgcaaacttgcagatatcttcctgctcctgatgacatgtcggcacttaaaatagcttttgagatttacatgaaatttggagattttgcaaatgctttgcgtattgcacttctgcttgatgacaaggtgggtgaatgaatgttatcattcctgtttgctgtccagtacataatgacactgacaaagatttcattgatttgttagtctctggagttgaagcagatttttacagcaactgatgattttcacctgaagaagcaattcgcgtttatcatagcacgccatgtgagcctcatcccatgcacataaacatgcaacagaagcaaattttctattgtgttcttgtctacaattcagtattattggtagtctgcattgttcacatttcctctttgcttatgtgttcaatggtttctttttttcctttgctgaagggtttaagcaccgacattgatgatgacatagctgcagatgaaaatgagaaggaggctttgcaggacataatttctaatattaaattgagtgaggggtaccttacacttgcacgagatattgaggtcatggagccaaaatctccagaagacatatataaggttaacttgtttccccgaaatgctgtctgctgattgcatgtatctacttatttatttgtttatgaacttgctattaatgattaaaaaatgcatgctaatttgttaggttcatttgattgatggccgaggggctacaagctccagtcttgattctgcaagacagaatctggcggcaacatttgtcaatgcattcgtgaatgctggatttggccaggttagttatgcgaatttcatcaaaggtttccagggcaagcaaagttctcaatgttcttgttgcaggataaactcatgaccgcaccatcagattcttcgggcagtggttcttctggaaactggttattcaagaacaaggaacatgggaaagctagtgcagccgctagtctggtaatgcaatgcaacagcttggtttatttccttatacatggcatttaggttattaggtgatcatagtgatgataaaacaatctttttcagggaatgattcttctgtgggattctgattcaggacttgcccaacttgataagtacctgcacagtaatgatattcatgttgttgctggggctttgctaggtattggaattgtttcttgtggtgtgaagagtgactgcgatccggtatgtccatattctaaaacttctaatgcgcaagtctctgtacatcttctaaaacttctaatgcgcaagactctgtactgatgttgtgacatcttttccaggcatttgctcttatttctgagtatttcagcagggatgagtcaattatacgaattggagcaatccttggtcttggtattgcttatgctggctcccagaaagaggaggtcaaaatccttgctcttggccttgctatcccactggttaaaaactattaaccatgtgttattttgtgttaacatggtttccaaacatttcaggttagagagaatcttacagcttttctgagtgactcccaagtacctctggaggtcttagtcttcgctgccatctccttaggtttggtgttcgttggttcttgtaatgaagagattgcacagacaatcatatgtgtcttaatggagcatagtgagccagagcttgcagagccaattatacgcttgcttcctgttgcccttggccttctatatcttggaaagcaggtaatttgactgtatacttattcatactcccaaattctacatttatgtttttattgaggtcaaggaccatatagtacatatgaacacattaactatacaatactgcctttgtactgctctgtacattgtttcatgattatgtctcacaaccagtctcttgttgattcctttgttttcccataatgagtttgataatcttttgatgctattaagcgataatagttaccagttttatgtatgcttatccttgtgcattttgtctattataatcgttgatcttaactgctcgcggtccacaaacttgtaagatgggtgcagtttagtacaatgagttgtaaaatgctcaaatcagtgcaatgacttgtgtgtgtgtgaaccaagggtgagaatagtccacattttggttaatcaaatcatttgagtgctgactaggatgccataccagcaagcatgtaaatgcgtataaggcatgtgagtgaacagtaacatgccctcccggaacttgcttctttcctgctagaggctaccttctctttgaatattttttacatgacgcatggggcccactcatgcagtgtggcacaaatagtgcaaccagggcaccgagttgtgagatgaaagatttgtgcagtgagggagatcaatcaggataaagaaactggaatttcgttttttctgggtggaggcacgggatgtccgcaatgatgacagctcaaggatgagataacgattatccaaagacaaggcacacaacctcatatgtatggtgactcattctaccatcattatcaggaatgtcaggcaccgctatcaatcttctgcagatttccctagcaagataatttccaaaaggcataggagaactatccctatcttttctggatcacaagattcatgcatgcattcagcagcataacgctccgattcgctaacatggactattttggccttgttcgcacgcaccatgcaagtagttgaactggctcaaatgttttttagttgtgctgaattgcacctaccatgtaggttcatgcatccaaagtacaattttactctttcggtaattgctatattctctggattaagcactgtcagctgtcttgcaaatgtaacatgcaacctacaccgtctgtttttagccatttttctgtttatatactattatactcattcttgagtactgttctcaggaaagtgtggaggcgaccgctgaggtttctaaaacctttgatgagaagataaggaattattgtgacgtgacactgatgtcgctggcatatgctgggacagggaacgtgcttaaggtgattcccaatcaacagaagaattgtgcatggattataggattacaatattttttagtgcctatttgtttttgacgaatctttccgtttgatttgcaggttcaaaaactccttggaatctgttccgagcatcttgagaaaggtgaaacccaccaaggaccagcagttcttggaatctccctaatttccatggctgaagaattaggggcggaaatggctgtacgttcccttgaacgtcttttacagtatggcgagcagaatattagaagggcggttcctctagctctgggcttgctttgcatatccaatccaaaggtatggtacatgatttgttatttttgtagtaacgtcaaatgtttgttatctttgtgccgttgcacacaatcattcaatatatagaattgctgataaagaattattcgataccatgccatgacagttagttttgcactctgctacatcatcaatttcaattcactactcttgagaatgtgctttgtcacacgactactatttgatcctggttattcgaggaaaagtagcatatttctagttaaaattagtagattgtatcatttggctagataaatatctcatatagttttctgatgtctacatttctaccacttgcctgtcaattaggtaaatgttatggacacaatgagcagactgagccatgatgcagatgcggaagtttctatggttagtaacctcactaacaaaacctaccatattaagttctatgagcattgatatttattcaatcaaattggtacatgcaggctgcaataatctccctgggcttgataggggctggtacaaacaatgcccgaatagctgggatgcttcggaacctctcaagttattattacaaagaagcaggacatctgttttgtgtaagttcaaatctaaaataaacattttttatctttgttttgccaattattctgatctcatgctgttgtattcaagtttcatatcagtttttttcatttgactttcaggtgaggattgctcaaggtcttgttcaccttgggaagggtttgctgaccctttcgccatatcactctgaccggttccttctgtccccgtgagtaacttgcaaagttgttgaatctccttcaatcttattggaaccacattttctaagagagtccattcttcacttttcagcatagcacttgctggtcttgtgacggttctgcatgcctgccttgacatgaaatccatcattctggggaagtaccattacatgctttatatccttgccctagctatgcaggtatatatctcgttcaaagatcttggtagtggacatattagctaaaccagtcacatggattctcagttttttctctactgaaacagcctcggatgctattgactgtggatgaggatctcaagcccctctctgttccggtttgtgttggtcaagcagttgacgtcgtcggtcaggcgggtcgacccaagacaattactggattccagacgcattcaacgcctgtattacttgccgcaggggaacgagcagagctggcaactgaaaagtaaactaaaacatctggagaacaattttcaaatttgtcagttgatctttgcttatgcttatgttctttctatatgcagatatcttccactgacaccagttcttgagggttttgtgatcctaagaaataacccagagtatcatgaagattaagggatagatatggcacacgcaaaatgcaggaagggcctggagtattaggaagaggcttggatcaatatctaattgtcacacaaagcaatgaacaaatagcacgatgaagacaatgcatacttgatacggtgaggactgagttgtaacaaagagttcaggtataatggggccaatatgacaggagaactttgtaagaattaggaatagaatctgtgggtgtaatggcatggccgaaaatgtttttgactataccagaatgaaaatgacccaagagtttgttgcc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069419.1 RefSeq:Os09g0326800]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 9]]
| |
| − | [[Category:Chromosome 9]]
| |
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Annotated Information
Function
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Expression
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Structured Information
