Difference between revisions of "Os09g0439000"

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(Created page with "{{JaponicaGene| GeneName = Os09g0439000| Description = Sterile alpha motif SAM domain containing protein| Version = NM_001069806.1 GI:115479354 GeneID:4347162| Length = 53...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os09g0439000|
 
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Description = Sterile alpha motif SAM domain containing protein|
 
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Version = NM_001069806.1 GI:115479354 GeneID:4347162|
 
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Length = 5386 bp|
 
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Definition = Oryza sativa Japonica Group Os09g0439000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
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Please input expression information here.
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AP = Chromosome 9:16905884..16911269|
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CDS = 16905884..16906031,16906389..16906492,16906870..16907081,16907157..16907262,16907368..16907481<br>,16907562..16907779,16908199..16908262,16908344..16908697,16908971..16909129<br>,16909848..16911269|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008402:16905884..16911269
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source=RiceChromosome09
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008402:16905884..16911269
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source=RiceChromosome09
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgccggcgaaccccaagctcgcggcgaagccctcgccgtcgccgccgaccgccgccgcagccgcctcccggccgaaagccacagccaaacctcccctcggtgccggataccgcgacaacgacgacgacgacgacgatttccagagccctccccgtgccagcagccgcgccgcccgcgcgttgaagccctccggtaatggcgcggcctcgcgccgccccagcaagaggttgaagccgtcgtcctcgtgttgctccgggaaggagaaccgtccagccgccgccggtagtggcagggctcccgctgggagggccgcctcgaagggcgcgggggttggcgaaaccctaggtgtcgtctcgagggttagcagcggcgttccaggcggggacaaagcgaggggcggaggaatttgcggcctattgaggtgcggatctgatgactttagttcagtttctaatgggaagaaaggattggatagatattggcgtcgcgatggaggtttgcattctcgccccaatccgatggattccacggtttcgatgccggatgccacatgtgatttggaaaatgggggttctcaagtggcgcaaatgctcagctccaatgaccgtatctcagttcagttggaggggaacgctaaggtggagttgggaaagtctgaatctgaccctacgactatgcggaaggaacggaatggctctggggcttgtgaaagtgatcatcctgcaagattgatcgagccgaggcttctgacattggttacaaattgtgattttggaggtgcagactccatggattcaaaagagcttggttcagcgattcatccctctgtttccaaagataggaatgtggagaacgaatctgggggggcatctgtatgtacatttgcacttcataacaggaattgccactcgagttgtgttgaatccgaacttgagatgttgaatgcgaagtatgatttgggtcctcgtgattgcaaggaaagccaagagggtccgggactttgtagcttgatttctgaagagaggacagttgcggcagaaggtgatgcaactttcacattcgaggaaagggggaacacatcaagtggacttgaggcttgtaaggggagtcactgcttggatccagttgaaccaaagcttatggactcatgtgcaacacatgcacttgaaggtgatggttgtgatgattttgagatcggaacacaacttaatgagctcataaacttgtgcatggaggattacacggagggtcctttgagcaacaaggtggcttgccttgaagggaatggaatggattgtgggagttttaattcatcttgtgaagtgcaatgccctttgtgtggatcaaatatttctgacttaagtgaagagctccggctggtgcatactaacagttgccttgatggagataaacctgctaaggaaccgaattccgataaccaaaatgaaccctgcggtgaaagcaatgttgaaaagaggcgtgttatggaatggttaaggaatctggggctatccaagtatgaggagatttttatcaaagaagaagttgactgggaaaccttgcaatggctcacagaagaggatcttctaggtatggggataacctctcttggtccaagaaagaaaattgcccatgctctatgcgagttacggaagaaaaacaatgatgccaatgatttggctgctgatatgttaaatttggagaataccaagaaggctaaaattccaatgaatggaaacaaattaattacggagtactttcggtgtccatcatctgatcaaagacaaaagaaagcatgtaaagtcaacacaccatctaatttgaatagccagaaaaaatccaatgctaaggccactggtggaaggcgtactgttaaaggaaaggttaaagatacacctatttggtgttgtatcccagggaccccttttcgagtggatgcttttcgctacttgagaggagattgctgccactggtttctgacacactttcatgtagaccattaccaaggcttgacaaaaagtttttgtcatgggaaaatatattgttcatcagttacagctaatcttgtacattataagattggtatcccatgggatcgattacatgtattgccactcaatgaaaagattactatcgcaggagttaatttaacatgttttgatgccaatcattgtcctggagcagttattattctctttgagccatctaatggtaaagctgttctacacactggagatttccggttttcttctgagatggcaaacaatcgtgttttgcagtcttctcctatccacactctaatacttgacacaacctactgtaatccacgatacgacttcccaactcaagagattgtaatacagtttgttatcgaggctatccaagctgaagctttcaatccaaagacactttttttgattggcagctatacaattggtaaagaaagactgtatatggaggttgctcgtttgcttcagaagaaaatatatgttggagctgcaaagttgcaaatattaaagcacttggggcttcctcaggaaatcatgcactggtttacagccaatgaagctgaaagtcacatacatgttgttcctatgtggactctggcaagcttcaagcggatgaagtatttgtccactcaatatgctgatcggtttgaccttatagttgcattttgtccaactggttggtcatttggtaaagggaagaaaaggacaccaggcagaaaatggcaacaaggagcaataatcagatatgaagtgccctacagtgaacatagcagcttcacagaactccgggagtttgttaggttcatctcaccagagcacataattcctagtgtaaacaatgatggccctgatagtgcaaatgccatgctggcccaattgttgaatgattag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MPANPKLAAKPSPSPPTAAAAASRPKATAKPPLGAGYRDNDDDD                    DDFQSPPRASSRAARALKPSGNGAASRRPSKRLKPSSSCCSGKENRPAAAGSGRAPAG                    RAASKGAGVGETLGVVSRVSSGVPGGDKARGGGICGLLRCGSDDFSSVSNGKKGLDRY                    WRRDGGLHSRPNPMDSTVSMPDATCDLENGGSQVAQMLSSNDRISVQLEGNAKVELGK                    SESDPTTMRKERNGSGACESDHPARLIEPRLLTLVTNCDFGGADSMDSKELGSAIHPS                    VSKDRNVENESGGASVCTFALHNRNCHSSCVESELEMLNAKYDLGPRDCKESQEGPGL                    CSLISEERTVAAEGDATFTFEERGNTSSGLEACKGSHCLDPVEPKLMDSCATHALEGD                    GCDDFEIGTQLNELINLCMEDYTEGPLSNKVACLEGNGMDCGSFNSSCEVQCPLCGSN                    ISDLSEELRLVHTNSCLDGDKPAKEPNSDNQNEPCGESNVEKRRVMEWLRNLGLSKYE                    EIFIKEEVDWETLQWLTEEDLLGMGITSLGPRKKIAHALCELRKKNNDANDLAADMLN                    LENTKKAKIPMNGNKLITEYFRCPSSDQRQKKACKVNTPSNLNSQKKSNAKATGGRRT                    VKGKVKDTPIWCCIPGTPFRVDAFRYLRGDCCHWFLTHFHVDHYQGLTKSFCHGKIYC                    SSVTANLVHYKIGIPWDRLHVLPLNEKITIAGVNLTCFDANHCPGAVIILFEPSNGKA                    VLHTGDFRFSSEMANNRVLQSSPIHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEA                    FNPKTLFLIGSYTIGKERLYMEVARLLQKKIYVGAAKLQILKHLGLPQEIMHWFTANE                    AESHIHVVPMWTLASFKRMKYLSTQYADRFDLIVAFCPTGWSFGKGKKRTPGRKWQQG                    AIIRYEVPYSEHSSFTELREFVRFISPEHIIPSVNNDGPDSANAMLAQLLND</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]
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DNA = <dnaseqindica>5239..5386#4778..4881#4189..4400#4008..4113#3789..3902#3491..3708#3008..3071#2573..2926#2141..2299#1..1422#atgccggcgaaccccaagctcgcggcgaagccctcgccgtcgccgccgaccgccgccgcagccgcctcccggccgaaagccacagccaaacctcccctcggtgccggataccgcgacaacgacgacgacgacgacgatttccagagccctccccgtgccagcagccgcgccgcccgcgcgttgaagccctccggtaatggcgcggcctcgcgccgccccagcaagaggttgaagccgtcgtcctcgtgttgctccgggaaggagaaccgtccagccgccgccggtagtggcagggctcccgctgggagggccgcctcgaagggcgcgggggttggcgaaaccctaggtgtcgtctcgagggttagcagcggcgttccaggcggggacaaagcgaggggcggaggaatttgcggcctattgaggtgcggatctgatgactttagttcagtttctaatgggaagaaaggattggatagatattggcgtcgcgatggaggtttgcattctcgccccaatccgatggattccacggtttcgatgccggatgccacatgtgatttggaaaatgggggttctcaagtggcgcaaatgctcagctccaatgaccgtatctcagttcagttggaggggaacgctaaggtggagttgggaaagtctgaatctgaccctacgactatgcggaaggaacggaatggctctggggcttgtgaaagtgatcatcctgcaagattgatcgagccgaggcttctgacattggttacaaattgtgattttggaggtgcagactccatggattcaaaagagcttggttcagcgattcatccctctgtttccaaagataggaatgtggagaacgaatctgggggggcatctgtatgtacatttgcacttcataacaggaattgccactcgagttgtgttgaatccgaacttgagatgttgaatgcgaagtatgatttgggtcctcgtgattgcaaggaaagccaagagggtccgggactttgtagcttgatttctgaagagaggacagttgcggcagaaggtgatgcaactttcacattcgaggaaagggggaacacatcaagtggacttgaggcttgtaaggggagtcactgcttggatccagttgaaccaaagcttatggactcatgtgcaacacatgcacttgaaggtgatggttgtgatgattttgagatcggaacacaacttaatgagctcataaacttgtgcatggaggattacacggagggtcctttgagcaacaaggtggcttgccttgaagggaatggaatggattgtgggagttttaattcatcttgtgaagtgcaatgccctttgtgtggatcaaatatttctgacttaagtgaagagctccggctggtgcatactaacagttgccttgatggagataaacctgctaaggtgattcttctatgtatttggaaaattaaaaattgttgtgatctagtgtaatgaccgtgataattattgctgctgaattgttaccttgttagaaagctcaaagacaatcatatggtaaccttaggcacaattttgcttcttgaaatttcccggttggccttcagttattcctctgcatgaggatcatgttagtatgtttattcactgggttctaatcattgttgtgacgatttttgtgtgtccatcattaagttcttatctgggacaatagatgaatacatcttactacatagtatatactaatagtattcattgtgaatattttgcatcaataagaatatatgatatttttgcgggaatataagcagtggtgaacctatgtagtcctacccggggtcactggatcccgggtagatgattcaatcctagcttaatttatgccgtgttaactagtatatcactcaataattagatgattagtatgtattgccgtattagacctccataatttttattttgggtttgccactgaataagaatataagattgatgctaccatactatggatacatttctaatttctatccttataaagtttagttgagaatggagacaatagcaattatataattcttatgttatttaatagtttccttttccttactatggaatcaacaaattatcatattttaagttttttgaattatctctgttccaggaaccgaattccgataaccaaaatgaaccctgcggtgaaagcaatgttgaaaagaggcgtgttatggaatggttaaggaatctggggctatccaagtatgaggagatttttatcaaagaagaagttgactgggaaaccttgcaatggctcacagaagaggtaatttcctgtggttttgttgatatggaggtttgtttgtcaagtatagagcttaagttatgggacctacttgtaaattggagattaacattgaccatttgcataactgcgtggatttcatgctagttgatttgttctagttaatgtgtcaaaagatgctcgcgttccttcaacatcttagttttttttggcataactggttggtgcatcgatctacacagcttttctggtttccaatgaaaaaactaacttgttgctgcctatgaattgcaggatcttctaggtatggggataacctctcttggtccaagaaagaaaattgcccatgctctatgcgagttacggaagaaaaacaatgatgccaatgatttggctgctgatatgttaaatttggagaataccaagaaggctaaaattccaatgaatggaaacaaattaattacggagtactttcggtgtccatcatctgatcaaagacaaaagaaagcatgtaaagtcaacacaccatctaatttgaatagccagaaaaaatccaatgctaaggccactggtggaaggcgtactgttaaaggaaaggttaaagatacacctatttggtgttgtatcccagggaccccttttcgagtggtatgatttgttttcaataggctgaaccttacattattcttcgtatgccatcaggctccgtaactgaatatattgctgcaggatgcttttcgctacttgagaggagattgctgccactggtttctgacacactttcatgtagaccgtaagtccaagttctttgttatcgaagagtcaatacaaactgaagaacgaaagaaatatataaagtgtttccttgagtttccattaatgaagacttagccattttttttgtctgacttgctattgaatcatttactgctacctccatcccataaagacttcatttttggctattaaccttgacaaagacttgttgtctaggttcatagccagaaatgagtctttttgggacagaggcagtacatcaatttgacattctagcatactacaagaagtggcatgtttgcatctcattgtttgttccctctatctttagctgtacttatctagtgaaataattagtttccacttttctttcttcgtgctaggcaggtttgcctgatgttttaatatctaaaacaaatgactttctgttcacagattaccaaggcttgacaaaaagtttttgtcatgggaaaatatattgttcatcagttacagctaatcttgtacattataagattggtatcccatgggatcgattacatgtattgccactcaatgaaaagattactatcgcaggagttaatttaacatgttttgatgccaatcattgtcctggagcagttattattctctttgagccatctaatggtaaagtaagtgttgttctaagttgcttcatcatctattcagcataactacttaacatgccatgtttctttacttgctcttttaggctgttctacacactggagatttccggttttcttctgagatggcaaacaatcgtgttttgcagtcttctcctatccacactctaatacttgacacaacctactgtaatccacgagtatgtttatcgcctagctgtatcagaagtgtttcccaagtttataattgacatggtcaggctatcatgtggcctttacataatccaaaaaaaaatgttttgcagtacgacttcccaactcaagagattgtaatacagtttgttatcgaggctatccaagctgaagctttcaatccaaagacactttttttgattggcagctatacaattggtactgtctctgtgtctcatctttgatattctggatattgtagtgggtatatacataaatcgttcatggatgcaggtaaagaaagactgtatatggaggttgctcgtttgcttcagaagaaaatatatgttggagctgcaaagttgcaaatattaaagcacttggggcttcctcaggaaatcatgcactggtttacagccaatgaagctgaaagtcacatacatgttgttcctatgtggactctggcaagcttcaagcggatgaagtatttgtccactcaatatgctgtaagaaaagtacttgatcctaccttcgtttgtaagataggggttttagcttgtttgatatgtccctattaatctgatgagttaatttaagaaaatcatggtctttaaagttgaagttgctatttctactccacctaaggataaggactaagatctgagcatcagagcatatatttgtaatctggctctttaaaattctggattgatacaatacctctgtgttccttttctaatgattagtcacattcttttggactaactagctaaagctgagaccttgttctaaacctgaatatccgtgcattagtcttcatatgttctgtttgcttctgaagttgccatttattctgattttctgatggctatattacttacaggatcggtttgaccttatagttgcattttgtccaactggttggtcatttggtaaagggaagaaaaggacaccaggcagaaaatggcaacaaggagcaataatcaggtaccatcctagaagatcttagttgacacttctcacgctatatgccagaaggaaatagagagacatttaacatagttctttgctgtttgcgcataaaaagtgtagttgtcttatttataattctgggatttggttcagtactcctttatttagtcgaaaacccgtagttctaactgccatgagctgaattttcacgctaactgcctgttaacatatccatccgttttaacataaatactagttaggcagaaagaattgtgtttataacaactgtgacaggttgagtatttcccttttgccgatgtgcattgagttatcgatcagttttgaagtttctccatttctttgtctctacagatatgaagtgccctacagtgaacatagcagcttcacagaactccgggagtttgttaggttcatctcaccagagcacataattcctagtgtaaacaatgatggccctgatagtgcaaatgccatgctggcccaattgttgaatgattag</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069806.1 RefSeq:Os09g0439000]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 9]]
 
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[[Category:Chromosome 9]]
 

Latest revision as of 13:25, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information