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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]] |
| − | GeneName = Os09g0497100|
| |
| − | Description = Similar to Pumilio RBD (Fragment)|
| |
| − | Version = NM_001070093.1 GI:115479928 GeneID:4347460|
| |
| − | Length = 7049 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os09g0497100, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
| |
| − | AP = Chromosome 9:19874229..19881277|
| |
| − | CDS = 19874596..19874642,19874749..19874920,19875300..19875494,19875687..19875797,19875881..19876093<br>,19876890..19876997,19877171..19877312,19877409..19878757,19879488..19880117<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008402:19874229..19881277
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008402:19874229..19881277
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggctacagagagtgctcggccgttgagtggaggaactggagcagggaagtggccaccaagcaaggacacgggttcctatgattctattccagctagcctttcagaagatgagttagcggagttggccttcatgccaaatagtggcggcatttttgggaagtggaggggttctgtcctggaacgcagtggaagcgctcctcctaccatggaaggttctttagttgcacttggtcacctcacaggtcaaccgagtggcaaccttggggccatactgccaaacttgggcactgaagctaacaattcagagtctaaggagaatatatattatgattcggcatgcgtcaaatactatatgtccaaggtgaatttgaacccaaggtttcctccaccactcgtttcaaggaaccagtttggcaagtctgaagaacgaaagccgttctcccttgatgacagcagcagcaggtccttacttcttggtcatcctactctgccaacacacaaggaagaacctgaggacgaaaagtcaccaagtttggattcaagttcagcagacgatgctcaatgtgattctgcccaaagcacatctaacttagggggccacagtccaaatcttgtagattcaattaaggaaaactttcatcggagcaatggtttgtatgataattcttccgatcttttaaatgcaaactctggtgatggagggtcgatttattctggcattagttcattgaagaattcctcactttatgttgtccagtcatcagacttgaatggatttccaccagatgctcatcagcgttcccctagacctattaggactccagtcagtacaaaacttactagcgacagtctgccagcttcatctcctcccacttcatcctgttctgactacagtactattactgaagcttgtcagcaaagaaatccaagcatggccgttaaacctggtgaaccagttggtaccatgcttgatagttcagacttcagtctgaagaatttgaatattagtccggatatcctaagtagttcatatgtcatgcaacagtggcagaaaaatgccccagtgtggaatggcctatcaaatgtagtccatggcgatcatgtgccaatgattcctccaggaattaatcttcctcaagttccatttgtggacaattccggttttggtcatatgaagttccctggtgatgttcaactgatgtcccagatcgggatggcaacacctttttgtacaccaaattcttttgggataccatgttatcctaatttgcagtcgcctagtgtttgggttcctccattcggaatcggcggctatggtttgcctggtccatttgtcccacctgttataactaacttcactcctcaacttcctggttttccttcagcagtaaatcttgctgcagcaactgacttatttcacccatataagatgtatgagcatcttggggtacctatgccatcccctgttcctgatcagagccttacgcattattttcaacagccccctatccatccgtatggtgttggaaatccatatgatacaatggtttcaagtaataattttgtagggaatcctgctggcgtttttggttcaccaatcattgacccatcagagcagaagtttcagataccggttactactgtagctgctaatgcctctactcccatcaaaggtggaaagcccattgggaattatgagactgcctcaccttactttggcgtaccgatgccttatccagcaggtccaacattacatgggcaacctgcttctggaacatctcctcgtgacaaaaggaacgatgtcaagggattccaaccccctcgaaaaaatatgcctgttagttccgagatacaaggtcagaaagggagggagaagtttgatgatcccaaggcacacttttctgttgaagaactaatatccagcagaactcatagggttgagctggctgacatcaaaggacagatagtgaaatacagctcggaccaaaatggtagccggttcattcagcagaaactggagaattgcaccattgaagaaaaggatttactttttgccgaggtccttcctcatgctttggaattgatgactgatgtattcggaaattatgttattcagaagttcttcgaaaaggggagcccccagcaaaagagagaaatagctaataagcttgccggtcatgtgttttctttgagccttcagatgtatggatgcagagtaattcagaaggcccttgaagtaattgatcttgaacagaaaattgttcttgttggtgaactcgatggacatgtgctgcgatgtgttcatgaccaaaatgggaatcatgttatacaaaaatgcattgaatgtattccattggaacatattggttttctggtgtcatcttttcagtgccaggttgccaaactgtcaatgcatacatatggatgtcgtgttattcagagaatcctcgagcgttgcagcaataattctgaatgcctttgcataattgatgaaatcttgcagtctgcttgcatcctcgcacaagatcagtatgggaactatgttgtgcagcatgttttggagaaagggaatgaacatgaaaggggccaaatcatcactaaattggctgggcaggtagtgcccatgagccaaaacaaatttgcgtctaatgtcatagagaggtgttttgaacatgggggcagtgcagagcgggaacttttggtcaaggagattctgaagcaaactgagggcaataactatttgctggtgataatgaaggaccagtatgctaattatgtggtacagaagatgcttacaacatgcaatgaacaacataaggagatccttctcagtcgtgtgaaaatccatttgccattattgaagaaatacacctatgccaagcacatcgtcagcctagtcgagcgcctctgcggtgacggagctgtgcagtccgaatccaaaaaaactgtaaccaagggctgctga</cdnaseq>|
| |
| − | AA = <aaseq>MATESARPLSGGTGAGKWPPSKDTGSYDSIPASLSEDELAELAF MPNSGGIFGKWRGSVLERSGSAPPTMEGSLVALGHLTGQPSGNLGAILPNLGTEANNS ESKENIYYDSACVKYYMSKVNLNPRFPPPLVSRNQFGKSEERKPFSLDDSSSRSLLLG HPTLPTHKEEPEDEKSPSLDSSSADDAQCDSAQSTSNLGGHSPNLVDSIKENFHRSNG LYDNSSDLLNANSGDGGSIYSGISSLKNSSLYVVQSSDLNGFPPDAHQRSPRPIRTPV STKLTSDSLPASSPPTSSCSDYSTITEACQQRNPSMAVKPGEPVGTMLDSSDFSLKNL NISPDILSSSYVMQQWQKNAPVWNGLSNVVHGDHVPMIPPGINLPQVPFVDNSGFGHM KFPGDVQLMSQIGMATPFCTPNSFGIPCYPNLQSPSVWVPPFGIGGYGLPGPFVPPVI TNFTPQLPGFPSAVNLAAATDLFHPYKMYEHLGVPMPSPVPDQSLTHYFQQPPIHPYG VGNPYDTMVSSNNFVGNPAGVFGSPIIDPSEQKFQIPVTTVAANASTPIKGGKPIGNY ETASPYFGVPMPYPAGPTLHGQPASGTSPRDKRNDVKGFQPPRKNMPVSSEIQGQKGR EKFDDPKAHFSVEELISSRTHRVELADIKGQIVKYSSDQNGSRFIQQKLENCTIEEKD LLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKREIANKLAGHVFSLSLQMYGCRV IQKALEVIDLEQKIVLVGELDGHVLRCVHDQNGNHVIQKCIECIPLEHIGFLVSSFQC QVAKLSMHTYGCRVIQRILERCSNNSECLCIIDEILQSACILAQDQYGNYVVQHVLEK GNEHERGQIITKLAGQVVPMSQNKFASNVIERCFEHGGSAERELLVKEILKQTEGNNY LLVIMKDQYANYVVQKMLTTCNEQHKEILLSRVKIHLPLLKKYTYAKHIVSLVERLCG DGAVQSESKKTVTKGC</aaseq>|
| |
| − | DNA = <dnaseqindica>6636..6682#6358..6529#5784..5978#5481..5591#5185..5397#4281..4388#3966..4107#2521..3869#1161..1790#gactcaaagcagagagaggagaaaaaacacaaaaggcagcgaagcggccgcgaaaagctcgactcggagataaaagggaaagcgagcgagaaagagagaggagaagcattggtggcgtgaggcggttggagcggggcacgcgcgcggccgaaggggggagaggagagaggaggcggggtggcgccgacgccggcggcaaaggttggttgtcctagggttcctgtcgttgctcgcgggaagggtcagcgaaggtgagggcctttggttacccctaactcaattatgtgtgaacagtgcttctccgtttgtgctctgtttatgtgtgtgtgtgtgtgtgtgtgtgtttattgaggctttgagtttttttttcttgagggggttgcttttgctgtacaggagaagatgatgtttaagtttaatttaatttaatttattttttttactcgctgcggtttgagcgttcgtggagtggtatgtgttgcgagcacacgggtgggtttgtggttatggatgtgtgtgtgtgtgtgtgtgtgtgtgattctgtgcaatgcttgatcaggtggcgagttcctcacttcggtatgttttaaatttatcctttttcgggcttcgtttgatgttgctctgcggtctgcaccctctagcttggtttaggcatgagattgtatgcaaggtgttttctttttaaccaatttcgtgatttttgggctagttggagacttgtttctgttcagtaataagtatttggggcagtaaacttttcttttttggaagatgtaatttctgttttcgatgggcgaatgtgtgcgtgatctcaccagcaagtccccgcctttggtgtgcttcacgtggtgtcctccatggcctcatggggcaggtttctctaggcggtggattttatctgctgtgctggatcacaaaaaccatgggtaaaaactaaaaaatcgcatttatttggcattttgctatgatgatttcgatggttaaagttcttgagttttttttttctttttgggtaatggagcttgcatatttgcttgctttgtagcattacatgtgtagttagtctgtactcgtataggttctaaaattgaactgaacttacagaattcagttgagaaattatcactaaaaatgatcaccttttgttgtccagcaaaatggctacagagagtgctcggccgttgagtggaggaactggagcagggaagtggccaccaagcaaggacacgggttcctatgattctattccagctagcctttcagaagatgagttagcggagttggccttcatgccaaatagtggcggcatttttgggaagtggaggggttctgtcctggaacgcagtggaagcgctcctcctaccatggaaggttctttagttgcacttggtcacctcacaggtcaaccgagtggcaaccttggggccatactgccaaacttgggcactgaagctaacaattcagagtctaaggagaatatatattatgattcggcatgcgtcaaatactatatgtccaaggtgaatttgaacccaaggtttcctccaccactcgtttcaaggaaccagtttggcaagtctgaagaacgaaagccgttctcccttgatgacagcagcagcaggtccttacttcttggtcatcctactctgccaacacacaaggaagaacctgaggacgaaaagtcaccaagtttggattcaagttcagcagacgatgctcaatgtgattctgcccaaagcacatctaacttagggggccacagtccaaatcttgtagattcaattaaggtaattcccgtattaattcaagaactagctctgattgttttttccacatgcactcaaacaaacttcgtggcgctgttcggttgtgggttttgcagcagctgcacctggtttctgcggctgtggtgcacagctgtggctactagtagcagctgcagccgcagccaaaaaaatggcagccggagaaggctaatgttttcatccgtgacataactccatctttgtatcctcaaatattaaagtcaagaaatctttatgcacggctatacagtagcagtcggcttcacagaccacaagaatggcagtcagctaagacttagtaaggtgaaataatacagtacaacatatgattaatgccccctgtgatatacaaacaaacatttccaatattcagtggctaagacgttttccaaaaactcacttatttgaaatagtaactggaaattctgatttaaactaattgatctttattatgtagtatctgctaaataaaatcaaaacatgtttttgtttcaaggaaatgtgatgggaatcgcactaaaccttgcaattccttaatacaagtacgacaagaaaagaagtattgattgtactcctccataaacattgttatttaccaactctcatgcatgcagatgaactccctaatatcttataatcatgttctgttttgctacagagtttgttgctgcagtctgcagatacttattgataatgatttctttttgtttaggaaaactttcatcggagcaatggtttgtatgataattcttccgatcttttaaatgcaaactctggtgatggagggtcgatttattctggcattagttcattgaagaattcctcactttatgttgtccagtcatcagacttgaatggatttccaccagatgctcatcagcgttcccctagacctattaggactccagtcagtacaaaacttactagcgacagtctgccagcttcatctcctcccacttcatcctgttctgactacagtactattactgaagcttgtcagcaaagaaatccaagcatggccgttaaacctggtgaaccagttggtaccatgcttgatagttcagacttcagtctgaagaatttgaatattagtccggatatcctaagtagttcatatgtcatgcaacagtggcagaaaaatgccccagtgtggaatggcctatcaaatgtagtccatggcgatcatgtgccaatgattcctccaggaattaatcttcctcaagttccatttgtggacaattccggttttggtcatatgaagttccctggtgatgttcaactgatgtcccagatcgggatggcaacacctttttgtacaccaaattcttttgggataccatgttatcctaatttgcagtcgcctagtgtttgggttcctccattcggaatcggcggctatggtttgcctggtccatttgtcccacctgttataactaacttcactcctcaacttcctggttttccttcagcagtaaatcttgctgcagcaactgacttatttcacccatataagatgtatgagcatcttggggtacctatgccatcccctgttcctgatcagagccttacgcattattttcaacagccccctatccatccgtatggtgttggaaatccatatgatacaatggtttcaagtaataattttgtagggaatcctgctggcgtttttggttcaccaatcattgacccatcagagcagaagtttcagataccggttactactgtagctgctaatgcctctactcccatcaaaggtggaaagcccattgggaattatgagactgcctcaccttactttggcgtaccgatgccttatccagcaggtccaacattacatgggcaacctgcttctggaacatctcctcgtgacaaaaggaacgatgtcaagggattccaaccccctcgaaaaaatatgcctgttagttccgagatacaaggtcagaaagggagggagaagtttgatgatcccaaggcacacttttctgttgaagaactaatatccagcagaactcatagggttgagctggctgacatcaaaggacagatagtgaaatacaggttagttttgattttggttgtttcattcactatctagatgcacataacccaatgaaaagcttgagatattaattgttattatgttcttgtcctcagctcggaccaaaatggtagccggttcattcagcagaaactggagaattgcaccattgaagaaaaggatttactttttgccgaggtccttcctcatgctttggaattgatgactgatgtattcggaaattatgttattcagaaggtatagtatttccttttcttatatgattcattttatggtaatttttttatgaatagtacacctattgaacttgaacaattgtacccccttttaagatattacagtatcatagcagcaattatgaaaaataatttatatttgtatgaaatgaaaataacatgtagtacatgcagttcttcgaaaaggggagcccccagcaaaagagagaaatagctaataagcttgccggtcatgtgttttctttgagccttcagatgtatggatgcagagtaattcagaaggtagtcttgacttctttatgggaagtataactttatttctgcttaatgttttggataccatatcatgaaaaccttttcagtggcacactatagcatgtattgtctgaggcggtctgagcaaattttcttcacactgttatgctatccatagacttatttattctcaatatcagttggcaaagtattatctgagtaaaatttcttcagactgttattctatccatagaattgtttattctgaacatcagttggtaagttttaaagtggttagcctgtgggacatcatttctcatattatgcatggtaatcagcatacattcttttaataagttgcaatcccactgtagccagctattcatggattagcatgtgttggaaatgaaaaataatgtgacttataagttgcaatcccattatatcccgttattcacacattttacttgctatattcctggagaactcattttcagatgagttttgtgttattctcatatataatggatacatagaaatgctctcttactaccacacacagactaagtggttgcacattaatgtaattaaactgaatcacaactaaaaagatgaggaacacacaccagacaagacaagtagtcaatgtcaggttatgtgtgttcgcattttcatcattcgtcgtaagtttttattagcaattatgctatttagacagtcttgtgaattgtttgttgacactgctacactgtcttttctggacgttatcgctatttgaactcaaatgccaatttcactgcctacttcactgctacaattgcaggcccttgaagtaattgatcttgaacagaaaattgttcttgttggtgaactcgatggacatgtgctgcgatgtgttcatgaccaaaatgggaatcatgttatacaaaaatgcattgaatgtattccattggaacatattggttttctggtgtcatcttttcagtgccaggttgccaaactgtcaatgcatacatatggatgtcgtgttattcaggtgaattggtaacgatgttgtatttttgttaatttcttgtcattttcttgtggtgttgatcatattcacattctgcttggcagagaatcctcgagcgttgcagcaataattctgaatgcctttgcataattgatgaaatcttgcagtctgcttgcatcctcgcacaagatcagtatgggaactatgttgtgcaggtgattttcttcttattctccaaaacttagtggctgatttgactaaattttcattaatataaaccatcagcatcttgttgctgtaatacggatagctattttgagttagagcaagtgtaacttaagtagctgatgttgaatttggcaacctgcagcatctttgcctttattataaccatgtgtattttgcagcatgttttggagaaagggaatgaacatgaaaggggccaaatcatcactaaattggctgggcaggtagtgcccatgagccaaaacaaatttgcgtctaatgtcatagagaggtgttttgaacatgggggcagtgcagagcgggaacttttggtcaaggagattctgaagcaaactgagggcaataactatttgctggtatacattattactgtaactcaccttttgttttttttcctttgccattccatgctcttttgagccaaatagctaaaagctcttgtttgttcaaaatttgactaatgttaaactcaattaaaagatatggtaggtaccttcatgatccaaataattgagtaggagttttacttaaattgaaacatataacagaagcccgtcattttttttggataacagaagtaatcctcataaaattctggcgcggctactgtttctaaggctacttggtgcaatacaaataacggtgtttccagctatttttgtttcgttatttgtgttattagtctaaatctttactcaagtaagcgatttacgaattacctgcactgctatacaggtgataatgaaggaccagtatgctaattatgtggtacagaagatgcttacaacatgcaatgaacaacataaggagatccttctcagtcgtgtgaaaatccatttgccattattgaagaaatacacctatgccaagcacatcgtcagcctagtcgagcgcctctgcggtgacggtgagtcgtccgcgtgccactcctccagccctgctaaatttctcctcctgatcctctacttcaattggccccaaaatttactgctcccatatatgccatttttcaggagctgtgcagtccgaatccaaaaaaactgtaaccaagggctgctgaattcgccacaggaaagccgactcttttctgccaaccctgtcaagttcagcgtagaaggcctatcagtcgcaaaagtggctaacaaagcaaccaaaaaaaaaaactgtcaacctgtcaccatagatcatcatcatacagatatagtcgttccaagcggtttgtccgtgtatttaagctaggaaatgatagtgtcatactataggaatggtaataatcatctgtgtgggctgtggctgtggatgctgcgtctcacagaagagagtctgagtgtggtggtgcgttgccgtacagtacatatcccgtagtcttgagtcttgtacccctgcttggtgatgtgtagttatcgccgcatccagcttgcttggtc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001070093.1 RefSeq:Os09g0497100]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 9]]
| |
| − | [[Category:Chromosome 9]]
| |
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Annotated Information
Function
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Expression
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Structured Information
